CSPI06G08700 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI06G08700
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Cell number regulator 6
Location	Chr6 : 7314938 .. 7316951 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAACGAACAAAGCACTAGTTAATAAAATTTTGGGGGTTATTTAGGCCAATTTTGAATGGGACTTTTATGATTTCAAGCAATTGGGAATCTCAAAATGATAAGGATTACCAAAACTGCAAAAGGGTTTCATTCATATATATCAATGATTTAATGTTATGATTAACTAAGATCCAGGTTGAGATTTTGTAGATTTGTTTTAATTTTTGGGTGAAATAATATAATTATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGGTTTTTTTTTTTCCTCTCTTTTTCATTTTCGTTTGATTACCAAGTTTATTTCGTTCATGTCGATTAGGTCTTAAGATTCTTTAGCTTTTGCCTTTGTGTGTGAAAATTTTGAAATTTTGTATCCAATAAAGTTCTTAACGTATTCAACATTTTTTATTCGGTGTGTTTGCACACTTTTTTCTGCTTTTATTAAAAAGAAAAATTTTGGTTTTGGATTATGACGAGAGTGTTAGAAGATGTCGACTTAGTTGAGATAACATATATTGATGAAGGTTATAATTAAAAAGAAGAATTCAATATTTTTATTAATTTTGTGTCCAAACGGATTTGTAAACTTTAAGAAGGGAGTTGAATTGGTCGAGAGCTTATTATACAAAACTATTTCTATATTTTGTGTATGTTGCTCTTAATTATAGAATAAAGAGATAACACGTCACATCGTTTATTAAATCATGTAACTCTGTATGCAGAATTGTTACTGATGTAACAATATTTTTTTTGGGTACAAACACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGTAAGAACTTTCAAACACTTTTATTTTTTCTTGTAAGTGGTTAGTTAATTGATCCAAATAAATCCTTAATCGAAAAATGAATAAAATACTTATTTTGAAAATGAATGATATACAGGATATGAATTATGAATTAAATTAATTGTTCAGGCTGATGTATTAAATTTTCTCTTTTTCATAATTATGATGTATTTACTATTTTGTTCAACTTGAAGAAAGTCTCTCAGTATTTCTTTTTTTACATCAATGCATGTATTTCCAGTACTTTTTTTTATATCAATGCATATATTTTTTATATAAATGGTATATGATGAGAGTACTACAAAAGTATTTAAGATGTTAGGGCGCACTACTTGCTAATTTCGTAACGTTTGTACTACTACTAGGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCCTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGGTTAGTTCGATGACCATTTTTTTTATGTTTATTTTCTTACTTGATAGAGTACTTAATCTTATTACAATATATATAAGATTCCCTATATATTTATATGTTTCTTTTTTTTTTTCTTGTAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAGAGATCTATTTGGTGTGGAGAGCTAGAAAAATATATTTTATAAGGAATGATCATATATATTTTA

mRNA sequence

ATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCCTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAG

Coding sequence (CDS)

ATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCCTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAG

Homology

[Close]

BLAST of CSPI06G08700 vs. Swiss-Prot
Match: CNR6_MAIZE (Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.6e-86
Identity = 139/218 (63.76%), Postives = 168/218 (77.06%), Query Frame = 1


Query: 2   AEGSAQSRYVRLTKDQ-GPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 61
           A  S  SRYV+LTKDQ  P EDI PGELNQP+ VPQL   RC ECGQ LPESY+PPADE 
Sbjct: 5   ATSSHPSRYVKLTKDQDAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEP 64

Query: 62  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 121
           WTTGI GC  D  TC  G+ CPCVLFG NVE +RE+IPW   CVCHA+ VEGG+ +A  T
Sbjct: 65  WTTGIFGCTDDPETCRTGLFCPCVLFGRNVEAVREDIPWTTPCVCHAVFVEGGITLAILT 124

Query: 122 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 181
           A+FHG+DP+TSFLI E L+F+WW+C  YTG+FRQ LQ+KYHLKNSPCDPC+VHCC+HWCA
Sbjct: 125 AIFHGVDPRTSFLIGEGLVFSWWLCATYTGIFRQGLQRKYHLKNSPCDPCMVHCCLHWCA 184

Query: 182 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNE 219
            CQE+RE    L++N  + MTV++PP +Q M+  ++ E
Sbjct: 185 NCQEHRERTGRLAENNAVPMTVVNPPPVQEMSMLEEVE 222

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BLAST of CSPI06G08700 vs. Swiss-Prot
Match: PCR10_ARATH (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16
Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1


Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           W++GIC CF D+ +C  G+ CPC +FG+N E L     +   C+ H  C+   +      
Sbjct: 47  WSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSG-TFAGPCLTH--CISWALVNTICC 106

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
              +G     + L       + + CG     +R+SL+ KY+L+ +PC   + H   H CA
Sbjct: 107 FATNG-----ALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFVTHFFCHLCA 166

Query: 181 LCQENREMRNHLSDN--ITMQMTVIDPPALQAMNT 214
           +CQE RE+R   S +  + M+M + + P  Q M +
Sbjct: 167 ICQEYREIREQSSGSYPLDMKMAITNAPLAQTMES 188

[Close]

BLAST of CSPI06G08700 vs. Swiss-Prot
Match: CNR5_MAIZE (Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15
Identity = 51/164 (31.10%), Postives = 72/164 (43.90%), Query Frame = 1


Query: 43  EECGQPLPESYQPPADEDWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNA 102
           EE     P+  Q P    W++GIC CF D  +C  G +CPC LFG+N + L        +
Sbjct: 29  EENHATRPKLNQDPTQ--WSSGICACFDDPQSCCIGAICPCFLFGKNAQFLGSG-TLAGS 88

Query: 103 CVCHAMCVEGGMAVAAATALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHL 162
           C  H  C+  G+  +       G+      L       A + CG     +R +L+ KY+L
Sbjct: 89  CTTH--CMLWGLLTSLCCVFTGGL-----VLAVPGSAVACYACG-----YRSALRTKYNL 148

Query: 163 KNSPCDPCLVHCCMHWCALCQENREMRNHLSDNITMQMTVIDPP 207
             +PC     H   H CA+CQE RE+R       +    V  PP
Sbjct: 149 PEAPCGDLTTHLFCHLCAICQEYREIRERTGSGSSPAPNVTPPP 177

[Close]

BLAST of CSPI06G08700 vs. Swiss-Prot
Match: CNR4_MAIZE (Cell number regulator 4 OS=Zea mays GN=CNR4 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13
Identity = 44/144 (30.56%), Postives = 63/144 (43.75%), Query Frame = 1


Query: 52  SYQPPADEDWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQN-ACVCHAMCV 111
           S  PP   +WTTG+CGCF D  +C    LCPC+ FG+  E L + +     A + + + +
Sbjct: 2   STYPPPTGEWTTGLCGCFSDCKSCCLSFLCPCIPFGQVAEVLDKGMTSCGLAGLLYCLLL 61

Query: 112 EGGMAVAAATALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPC 171
             G+AV                              IYT  +R+ L+  Y L   PC  C
Sbjct: 62  HAGVAVVPCHC-------------------------IYTCTYRRKLRAAYDLPPEPCADC 120

Query: 172 LVHCCMHWCALCQENREMRNHLSD 195
            VH     CA+ Q  RE++N  +D
Sbjct: 122 CVHMWCGPCAISQMYRELKNRGAD 120

[Close]

BLAST of CSPI06G08700 vs. Swiss-Prot
Match: CNR11_MAIZE (Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 47/162 (29.01%), Postives = 68/162 (41.98%), Query Frame = 1


Query: 51  ESYQPPADE----DWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCH 110
           E+  P AD+    +W+ G+C CF D+ TC   + CPCV FG   E +           C 
Sbjct: 27  EALSPLADQSMPGEWSVGLCDCFGDLHTCCLTLWCPCVTFGRTAEIV------DRGSTC- 86

Query: 111 AMCVEGGMAVAAATALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSP 170
             C+ G                 T + +  T+ + W    +Y    R S++ +Y L+ SP
Sbjct: 87  --CMSG-----------------TLYYLLSTIGWQW----LYGCAKRSSMRSQYSLRESP 146

Query: 171 CDPCLVHCCMHWCALCQENREMRNHLSDNITMQMTVIDPPAL 209
           C  C VH     CALCQE  E++        M   +  PP L
Sbjct: 147 CMDCCVHFWCGPCALCQEYTELQKR---GFHMAKGISSPPHL 155

[Close]

BLAST of CSPI06G08700 vs. TrEMBL
Match: A0A0A0KDV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108550 PE=4 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 5.4e-142
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 237
           LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNE PPSSSVVPSQELAITPI
Sbjct: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNEFPPSSSVVPSQELAITPI 236

[Close]

BLAST of CSPI06G08700 vs. TrEMBL
Match: B9RD43_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609360 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.4e-110
Identity = 182/239 (76.15%), Postives = 204/239 (85.36%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+G+AQSRYV+LTKDQ P+EDITPGELNQPIQVPQLI+HRC ECGQ LPESY+PPADED
Sbjct: 1   MADGNAQSRYVKLTKDQSPVEDITPGELNQPIQVPQLIIHRCVECGQALPESYEPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGIC C +D  +C  G+ CPCVLFG NVETLRE+IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 61  WTTGICACLEDFDSCRTGLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E L FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 AFFHGIDPKTSFLICEGLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPP---SSSVVPSQELAITPI 237
           LCQE+REM+NHLSDN  MQMTV++PP +Q MNT++  E  P   SS    +  L I P+
Sbjct: 181 LCQEHREMKNHLSDNSHMQMTVVNPPPVQQMNTDESQESAPDAQSSRNGENTNLEIQPV 239

[Close]

BLAST of CSPI06G08700 vs. TrEMBL
Match: A0A067K997_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14621 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.1e-110
Identity = 178/224 (79.46%), Postives = 197/224 (87.95%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+GS QSRYV+LT+DQ P EDITPGELNQPIQVPQLI+HRC ECGQPLPESY+PPADED
Sbjct: 1   MADGSTQSRYVKLTRDQTPAEDITPGELNQPIQVPQLIIHRCIECGQPLPESYEPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC +D  +C  G  CPCVLFG NVETLR++IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 61  WTTGICGCVEDAESCRTGFFCPCVLFGHNVETLRDDIPWSNACVCHAMCVEGGLALAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E LLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 AFFHGIDPKTSFLICEGLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSS 225
           LCQE+REMRNHLSDN  MQMTV++PP  Q MN+ +  E   S++
Sbjct: 181 LCQEHREMRNHLSDNAAMQMTVVNPPPAQQMNSGESQESAASTA 224

[Close]

BLAST of CSPI06G08700 vs. TrEMBL
Match: W9R3S9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021797 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.9e-108
Identity = 174/224 (77.68%), Postives = 201/224 (89.73%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEG+AQSRYV+LTKDQ PLEDITPGELNQPI+VPQL+VH+C ECGQPLPESY+PPADED
Sbjct: 1   MAEGNAQSRYVKLTKDQAPLEDITPGELNQPIEVPQLVVHKCTECGQPLPESYEPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGI GC +D  +CW G+ CPCVLFG NVETLRE+IPW NACVCHA+CVEGGMAVAAA 
Sbjct: 61  WTTGIFGCAEDTQSCWTGLFCPCVLFGRNVETLREDIPWTNACVCHAVCVEGGMAVAAAA 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           AL +GIDP T+FLI E+L+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALINGIDPHTTFLICESLVFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSS 225
           LCQE+REM+NHLSD+   QMT+++PP +Q M+ +D+N+ P  S+
Sbjct: 181 LCQEHREMKNHLSDSAASQMTIVNPPPVQEMH-SDENKDPERSA 223

[Close]

BLAST of CSPI06G08700 vs. TrEMBL
Match: D7SLS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02460 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.6e-107
Identity = 173/224 (77.23%), Postives = 194/224 (86.61%), Query Frame = 1


Query: 1   MAEGSAQS-RYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 60
           M+EG AQS RYV+L KDQ P+EDITPGELNQPI+VPQLIVHRC ECGQPLPESYQPPADE
Sbjct: 40  MSEGIAQSSRYVKLKKDQAPVEDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPPADE 99

Query: 61  DWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 120
           DWTTGICGC +D  +CW G+ CPCVLFG NVE LRE+IPW NACVCHA+CVEGGM +AAA
Sbjct: 100 DWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLAAA 159

Query: 121 TALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 180
           TALFHGIDP+TSFLI E LLF WWMCGIYTGLFRQSLQK+YHLKNSPCDPCLVHCCMHWC
Sbjct: 160 TALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMHWC 219

Query: 181 ALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSS 224
           A+CQE+REM+ HLS N  M MT+++PP +Q M+   + E  PSS
Sbjct: 220 AICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAPSS 263

[Close]

BLAST of CSPI06G08700 vs. TAIR10
Match: AT2G45010.1 (AT2G45010.1 PLAC8 family protein)

HSP 1 Score: 340.9 bits (873), Expect = 6.4e-94
Identity = 153/230 (66.52%), Postives = 182/230 (79.13%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLE-DITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 60
           MA+G+A SRYV+L K+Q P+E DITPGELNQPI VPQL V +C EC Q LPE+Y+PP+DE
Sbjct: 1   MADGNASSRYVKLRKEQAPVEEDITPGELNQPIDVPQLNVRKCHECMQVLPETYEPPSDE 60

Query: 61  DWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 120
           +WTTGI GC +D  +C  G+ CPCVLFG N+E +REEIPW   CVCHA+CVEGGMA+AA 
Sbjct: 61  NWTTGIFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAV 120

Query: 121 TALFHG-IDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHW 180
           TALF G IDPQT+ +I E L FAWWMCGIY+GLFRQ LQKKYHLKN+PCD C+VHCC+HW
Sbjct: 121 TALFSGYIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLKNAPCDHCMVHCCLHW 180

Query: 181 CALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPS 229
           CALCQE+REM+NHLSD      T +DPP +Q MNT +  +   SSS  PS
Sbjct: 181 CALCQEHREMKNHLSDTEASSSTTMDPPPVQEMNTEERRDASSSSSSSPS 230

[Close]

BLAST of CSPI06G08700 vs. TAIR10
Match: AT5G51400.1 (AT5G51400.1 PLAC8 family protein)

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-84
Identity = 135/226 (59.73%), Postives = 174/226 (76.99%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           M++G A SRYV+LTK+Q P+++I PGELNQPI+V  L VH+C ECGQPLPE+++ PADE 
Sbjct: 2   MSDGGAPSRYVKLTKEQAPVDEIHPGELNQPIEVSHLAVHKCNECGQPLPENFEAPADEP 61

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLR-EEIPWQNACVCHAMCVEGGMAVAAA 120
           WTTGI GC +D+++ W G+ CP VLFG   ETL  EE  W+ AC+CH++ VEGG+  A+ 
Sbjct: 62  WTTGIFGCTEDMNSFWLGLFCPSVLFGRVYETLSDEETSWKKACICHSIVVEGGLTAASM 121

Query: 121 TALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 180
            A   GIDP TS LI E LLF WWMCGIYTG  RQ+LQ+KYHL+N+PCDPC+VHCC+H+C
Sbjct: 122 LACVPGIDPHTSLLIWEGLLFVWWMCGIYTGNVRQTLQRKYHLQNAPCDPCMVHCCLHFC 181

Query: 181 ALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSV 226
           A+CQE+REM+N LSDN  M MTVI+PP +Q M+ + D +    +SV
Sbjct: 182 AVCQEHREMKNRLSDNFVMPMTVINPPPVQEMSASGDRDQHHHNSV 227

[Close]

BLAST of CSPI06G08700 vs. TAIR10
Match: AT2G40935.1 (AT2G40935.1 PLAC8 family protein)

HSP 1 Score: 88.2 bits (217), Expect = 7.4e-18
Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1


Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           W++GIC CF D+ +C  G+ CPC +FG+N E L     +   C+ H  C+   +      
Sbjct: 47  WSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSG-TFAGPCLTH--CISWALVNTICC 106

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
              +G     + L       + + CG     +R+SL+ KY+L+ +PC   + H   H CA
Sbjct: 107 FATNG-----ALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFVTHFFCHLCA 166

Query: 181 LCQENREMRNHLSDN--ITMQMTVIDPPALQAMNT 214
           +CQE RE+R   S +  + M+M + + P  Q M +
Sbjct: 167 ICQEYREIREQSSGSYPLDMKMAITNAPLAQTMES 188

[Close]

BLAST of CSPI06G08700 vs. NCBI nr
Match: gi|449445702|ref|XP_004140611.1| (PREDICTED: cell number regulator 6 [Cucumis sativus])

HSP 1 Score: 511.5 bits (1316), Expect = 7.7e-142
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 237
           LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNE PPSSSVVPSQELAITPI
Sbjct: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNEFPPSSSVVPSQELAITPI 236

[Close]

BLAST of CSPI06G08700 vs. NCBI nr
Match: gi|659120414|ref|XP_008460181.1| (PREDICTED: cell number regulator 6 [Cucumis melo])

HSP 1 Score: 498.8 bits (1283), Expect = 5.2e-138
Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED
Sbjct: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGICGC QD  TCWRGM CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT
Sbjct: 61  WTTGICGCLQDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           ALFHGIDPQTSFLISETL+FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 ALFHGIDPQTSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQELAITPI 237
           LCQENREMRNHLSDN+TMQMTVIDPPALQAMNTNDDNE PPSSS+VPS+ELAITPI
Sbjct: 181 LCQENREMRNHLSDNLTMQMTVIDPPALQAMNTNDDNEPPPSSSIVPSRELAITPI 236

[Close]

BLAST of CSPI06G08700 vs. NCBI nr
Match: gi|1009140455|ref|XP_015887662.1| (PREDICTED: cell number regulator 6 [Ziziphus jujuba])

HSP 1 Score: 412.9 bits (1060), Expect = 3.7e-112
Identity = 180/220 (81.82%), Postives = 201/220 (91.36%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQ--GPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPAD 60
           MAEG+AQS+YV+LTKDQ   PLEDITPGELNQPI+VPQL+VHRC ECGQPLPESYQPPAD
Sbjct: 1   MAEGNAQSKYVKLTKDQDQSPLEDITPGELNQPIEVPQLVVHRCMECGQPLPESYQPPAD 60

Query: 61  EDWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAA 120
           EDWTTGICGC +D  +CW G+ CPCVLFG NVETLR+EIPW NACVCHA+CVEGGMAVAA
Sbjct: 61  EDWTTGICGCTEDFDSCWTGLFCPCVLFGRNVETLRDEIPWTNACVCHAICVEGGMAVAA 120

Query: 121 ATALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHW 180
           ATALFHGIDP+TSFLI E+L FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCC+HW
Sbjct: 121 ATALFHGIDPKTSFLICESLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCLHW 180

Query: 181 CALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNE 219
           CALCQE+REMRNHLSDN +MQMTV++PP +Q MN+ +  +
Sbjct: 181 CALCQEHREMRNHLSDNASMQMTVVNPPPVQEMNSEESRD 220

[Close]

BLAST of CSPI06G08700 vs. NCBI nr
Match: gi|255541136|ref|XP_002511632.1| (PREDICTED: cell number regulator 6 isoform X3 [Ricinus communis])

HSP 1 Score: 406.4 bits (1043), Expect = 3.5e-110
Identity = 182/239 (76.15%), Postives = 204/239 (85.36%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+G+AQSRYV+LTKDQ P+EDITPGELNQPIQVPQLI+HRC ECGQ LPESY+PPADED
Sbjct: 1   MADGNAQSRYVKLTKDQSPVEDITPGELNQPIQVPQLIIHRCVECGQALPESYEPPADED 60

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGIC C +D  +C  G+ CPCVLFG NVETLRE+IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 61  WTTGICACLEDFDSCRTGLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAAT 120

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E L FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 121 AFFHGIDPKTSFLICEGLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPP---SSSVVPSQELAITPI 237
           LCQE+REM+NHLSDN  MQMTV++PP +Q MNT++  E  P   SS    +  L I P+
Sbjct: 181 LCQEHREMKNHLSDNSHMQMTVVNPPPVQQMNTDESQESAPDAQSSRNGENTNLEIQPV 239

[Close]

BLAST of CSPI06G08700 vs. NCBI nr
Match: gi|1000982622|ref|XP_015584517.1| (PREDICTED: cell number regulator 6 isoform X2 [Ricinus communis])

HSP 1 Score: 406.4 bits (1043), Expect = 3.5e-110
Identity = 182/239 (76.15%), Postives = 204/239 (85.36%), Query Frame = 1


Query: 1   MAEGSAQSRYVRLTKDQGPLEDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADED 60
           MA+G+AQSRYV+LTKDQ P+EDITPGELNQPIQVPQLI+HRC ECGQ LPESY+PPADED
Sbjct: 4   MADGNAQSRYVKLTKDQSPVEDITPGELNQPIQVPQLIIHRCVECGQALPESYEPPADED 63

Query: 61  WTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAAT 120
           WTTGIC C +D  +C  G+ CPCVLFG NVETLRE+IPW NACVCHAMCVEGG+A+AAAT
Sbjct: 64  WTTGICACLEDFDSCRTGLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAAT 123

Query: 121 ALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 180
           A FHGIDP+TSFLI E L FAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA
Sbjct: 124 AFFHGIDPKTSFLICEGLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCA 183

Query: 181 LCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPP---SSSVVPSQELAITPI 237
           LCQE+REM+NHLSDN  MQMTV++PP +Q MNT++  E  P   SS    +  L I P+
Sbjct: 184 LCQEHREMKNHLSDNSHMQMTVVNPPPVQQMNTDESQESAPDAQSSRNGENTNLEIQPV 242

The following BLAST results are available for this feature:

BLAST of CSPI06G08700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNR6_MAIZE	4.6e-86	63.76	Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1	[more]
PCR10_ARATH	1.3e-16	30.97	Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1	[more]
CNR5_MAIZE	5.5e-15	31.10	Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1	[more]
CNR4_MAIZE	2.3e-13	30.56	Cell number regulator 4 OS=Zea mays GN=CNR4 PE=2 SV=1	[more]
CNR11_MAIZE	1.7e-11	29.01	Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1	[more]

BLAST of CSPI06G08700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV6_CUCSA	5.4e-142	99.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108550 PE=4 SV=1	[more]
B9RD43_RICCO	2.4e-110	76.15	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609360 PE=4 SV=1	[more]
A0A067K997_JATCU	4.1e-110	79.46	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14621 PE=4 SV=1	[more]
W9R3S9_9ROSA	3.9e-108	77.68	Uncharacterized protein OS=Morus notabilis GN=L484_021797 PE=4 SV=1	[more]
D7SLS5_VITVI	5.6e-107	77.23	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02460 PE=4 SV=...	[more]

BLAST of CSPI06G08700 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45010.1	6.4e-94	66.52	PLAC8 family protein	[more]
AT5G51400.1	2.7e-84	59.73	PLAC8 family protein	[more]
AT2G40935.1	7.4e-18	30.97	PLAC8 family protein	[more]

BLAST of CSPI06G08700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445702\|ref\|XP_004140611.1\|	7.7e-142	99.58	PREDICTED: cell number regulator 6 [Cucumis sativus]	[more]
gi\|659120414\|ref\|XP_008460181.1\|	5.2e-138	96.19	PREDICTED: cell number regulator 6 [Cucumis melo]	[more]
gi\|1009140455\|ref\|XP_015887662.1\|	3.7e-112	81.82	PREDICTED: cell number regulator 6 [Ziziphus jujuba]	[more]
gi\|255541136\|ref\|XP_002511632.1\|	3.5e-110	76.15	PREDICTED: cell number regulator 6 isoform X3 [Ricinus communis]	[more]
gi\|1000982622\|ref\|XP_015584517.1\|	3.5e-110	76.15	PREDICTED: cell number regulator 6 isoform X2 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G08700.1	CSPI06G08700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 61..187 score: 1.5
IPR006461	PLAC8 motif-containing protein	TIGRFAMs	TIGR01571	TIGR01571	coord: 60..189 score: 3.6
None	No IPR available	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 2..230 score: 9.7E
None	No IPR available	PANTHER	PTHR15907:SF35	GENE1000 PROTEIN-RELATED	coord: 2..230 score: 9.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI06G08700	Cla006675	Watermelon (97103) v1	cpiwmB563
CSPI06G08700	Csa6G108550	Cucumber (Chinese Long) v2	cpicuB314
CSPI06G08700	MELO3C022235	Melon (DHL92) v3.5.1	cpimeB436
CSPI06G08700	ClCG06G002950	Watermelon (Charleston Gray)	cpiwcgB503
CSPI06G08700	Lsi09G016370	Bottle gourd (USVL1VR-Ls)	cpilsiB404
CSPI06G08700	MELO3C022235.2	Melon (DHL92) v3.6.1	cpimedB435
CSPI06G08700	CsaV3_6G009070	Cucumber (Chinese Long) v3	cpicucB364
CSPI06G08700	Cla97C06G112340	Watermelon (97103) v2	cpiwmbB495
CSPI06G08700	Bhi12G001924	Wax gourd	cpiwgoB549
CSPI06G08700	Cucsa.120690	Cucumber (Gy14) v1	cgycpiB156
CSPI06G08700	CmaCh08G008590	Cucurbita maxima (Rimu)	cmacpiB918
CSPI06G08700	Cp4.1LG17g03930	Cucurbita pepo (Zucchini)	cpecpiB329
CSPI06G08700	CsGy6G008800	Cucumber (Gy14) v2	cgybcpiB288
CSPI06G08700	Carg13873	Silver-seed gourd	carcpiB0637

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI06G08700	Bottle gourd (USVL1VR-Ls)	cpilsiB401
CSPI06G08700	Silver-seed gourd	carcpiB0936
CSPI06G08700	Cucurbita maxima (Rimu)	cmacpiB383
CSPI06G08700	Cucurbita moschata (Rifu)	cmocpiB372
CSPI06G08700	Cucurbita moschata (Rifu)	cmocpiB898
CSPI06G08700	Cucurbita pepo (Zucchini)	cpecpiB154