CSPI06G08700.1 (mRNA) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAACGAACAAAGCACTAGTTAATAAAATTTTGGGGGTTATTTAGGCCAATTTTGAATGGGACTTTTATGATTTCAAGCAATTGGGAATCTCAAAATGATAAGGATTACCAAAACTGCAAAAGGGTTTCATTCATATATATCAATGATTTAATGTTATGATTAACTAAGATCCAGGTTGAGATTTTGTAGATTTGTTTTAATTTTTGGGTGAAATAATATAATTATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGGTTTTTTTTTTTCCTCTCTTTTTCATTTTCGTTTGATTACCAAGTTTATTTCGTTCATGTCGATTAGGTCTTAAGATTCTTTAGCTTTTGCCTTTGTGTGTGAAAATTTTGAAATTTTGTATCCAATAAAGTTCTTAACGTATTCAACATTTTTTATTCGGTGTGTTTGCACACTTTTTTCTGCTTTTATTAAAAAGAAAAATTTTGGTTTTGGATTATGACGAGAGTGTTAGAAGATGTCGACTTAGTTGAGATAACATATATTGATGAAGGTTATAATTAAAAAGAAGAATTCAATATTTTTATTAATTTTGTGTCCAAACGGATTTGTAAACTTTAAGAAGGGAGTTGAATTGGTCGAGAGCTTATTATACAAAACTATTTCTATATTTTGTGTATGTTGCTCTTAATTATAGAATAAAGAGATAACACGTCACATCGTTTATTAAATCATGTAACTCTGTATGCAGAATTGTTACTGATGTAACAATATTTTTTTTGGGTACAAACACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGTAAGAACTTTCAAACACTTTTATTTTTTCTTGTAAGTGGTTAGTTAATTGATCCAAATAAATCCTTAATCGAAAAATGAATAAAATACTTATTTTGAAAATGAATGATATACAGGATATGAATTATGAATTAAATTAATTGTTCAGGCTGATGTATTAAATTTTCTCTTTTTCATAATTATGATGTATTTACTATTTTGTTCAACTTGAAGAAAGTCTCTCAGTATTTCTTTTTTTACATCAATGCATGTATTTCCAGTACTTTTTTTTATATCAATGCATATATTTTTTATATAAATGGTATATGATGAGAGTACTACAAAAGTATTTAAGATGTTAGGGCGCACTACTTGCTAATTTCGTAACGTTTGTACTACTACTAGGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCCTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGGTTAGTTCGATGACCATTTTTTTTATGTTTATTTTCTTACTTGATAGAGTACTTAATCTTATTACAATATATATAAGATTCCCTATATATTTATATGTTTCTTTTTTTTTTTCTTGTAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAGAGATCTATTTGGTGTGGAGAGCTAGAAAAATATATTTTATAAGGAATGATCATATATATTTTA ATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCCTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAG ATGGCAGAGGGAAGTGCACAATCAAGATATGTGAGATTGACGAAAGATCAAGGGCCATTGGAAGACATAACCCCTGGAGAACTTAATCAACCTATTCAAGTTCCACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAGCCGCTGCCAGAAAGCTATCAGCCACCAGCCGATGAAGACTGGACTACTGGCATTTGTGGTTGTTTTCAAGATATTAGTACATGCTGGAGAGGGATGTTGTGTCCGTGTGTGTTGTTTGGTGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGTCATGCAATGTGTGTAGAAGGAGGAATGGCTGTGGCAGCTGCAACAGCACTTTTTCATGGCATTGATCCCCAAACTTCTTTTCTGATTTCTGAAACCCTTCTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCCTGTTTCGCCAATCGTTGCAAAAGAAATATCATCTCAAGAACTCTCCATGTGACCCATGTTTGGTGCATTGTTGCATGCACTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAACATCACAATGCAAATGACTGTTATCGATCCTCCTGCCCTTCAAGCGATGAATACCAACGATGATAACGAACTTCCACCTTCTTCCTCGGTCGTGCCATCTCAAGAACTCGCCATCACTCCGATTTAG
BLAST of CSPI06G08700.1 vs. Swiss-Prot
Match: CNR6_MAIZE (Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.6e-86 Identity = 139/218 (63.76%), Postives = 168/218 (77.06%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. Swiss-Prot
Match: PCR10_ARATH (Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.3e-16 Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. Swiss-Prot
Match: CNR5_MAIZE (Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 5.5e-15 Identity = 51/164 (31.10%), Postives = 72/164 (43.90%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. Swiss-Prot
Match: CNR4_MAIZE (Cell number regulator 4 OS=Zea mays GN=CNR4 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13 Identity = 44/144 (30.56%), Postives = 63/144 (43.75%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. Swiss-Prot
Match: CNR11_MAIZE (Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11 Identity = 47/162 (29.01%), Postives = 68/162 (41.98%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TrEMBL
Match: A0A0A0KDV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108550 PE=4 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 5.4e-142 Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TrEMBL
Match: B9RD43_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609360 PE=4 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 2.4e-110 Identity = 182/239 (76.15%), Postives = 204/239 (85.36%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TrEMBL
Match: A0A067K997_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14621 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 4.1e-110 Identity = 178/224 (79.46%), Postives = 197/224 (87.95%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TrEMBL
Match: W9R3S9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021797 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 3.9e-108 Identity = 174/224 (77.68%), Postives = 201/224 (89.73%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TrEMBL
Match: D7SLS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02460 PE=4 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 5.6e-107 Identity = 173/224 (77.23%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TAIR10
Match: AT2G45010.1 (AT2G45010.1 PLAC8 family protein) HSP 1 Score: 340.9 bits (873), Expect = 6.4e-94 Identity = 153/230 (66.52%), Postives = 182/230 (79.13%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TAIR10
Match: AT5G51400.1 (AT5G51400.1 PLAC8 family protein) HSP 1 Score: 308.9 bits (790), Expect = 2.7e-84 Identity = 135/226 (59.73%), Postives = 174/226 (76.99%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. TAIR10
Match: AT2G40935.1 (AT2G40935.1 PLAC8 family protein) HSP 1 Score: 88.2 bits (217), Expect = 7.4e-18 Identity = 48/155 (30.97%), Postives = 78/155 (50.32%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. NCBI nr
Match: gi|449445702|ref|XP_004140611.1| (PREDICTED: cell number regulator 6 [Cucumis sativus]) HSP 1 Score: 511.5 bits (1316), Expect = 7.7e-142 Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. NCBI nr
Match: gi|659120414|ref|XP_008460181.1| (PREDICTED: cell number regulator 6 [Cucumis melo]) HSP 1 Score: 498.8 bits (1283), Expect = 5.2e-138 Identity = 227/236 (96.19%), Postives = 231/236 (97.88%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. NCBI nr
Match: gi|1009140455|ref|XP_015887662.1| (PREDICTED: cell number regulator 6 [Ziziphus jujuba]) HSP 1 Score: 412.9 bits (1060), Expect = 3.7e-112 Identity = 180/220 (81.82%), Postives = 201/220 (91.36%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. NCBI nr
Match: gi|255541136|ref|XP_002511632.1| (PREDICTED: cell number regulator 6 isoform X3 [Ricinus communis]) HSP 1 Score: 406.4 bits (1043), Expect = 3.5e-110 Identity = 182/239 (76.15%), Postives = 204/239 (85.36%), Query Frame = 1
BLAST of CSPI06G08700.1 vs. NCBI nr
Match: gi|1000982622|ref|XP_015584517.1| (PREDICTED: cell number regulator 6 isoform X2 [Ricinus communis]) HSP 1 Score: 406.4 bits (1043), Expect = 3.5e-110 Identity = 182/239 (76.15%), Postives = 204/239 (85.36%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
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