Lsi09G016370 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G016370
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cell number regulator 12
Location	chr09 : 24683579 .. 24688684 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCTGTTAGCAGCCATTGAAAACCTTTACAAAGTAATCGATAACCACGAGAATGCAATATGCTTGAATCACAGGAGTTCATCAGCGGCTGAAGCCATTTTGACAGCGATTCAAGTGAAAAACTCTCCTGCAGGAAACTGATTAATATTGCAACTCCATGAGAACTTTTTATCATGACAATAACTTCTCAAGAACAAATTTAATTCCGAAATTCTAATTCTAAGACCAAGAATGAGGTTAAAATGGTTATTAAAAAAAAAAAAAAAAAAACATAAACCATCTTCCACAAGAAAGATCCTACAGCACGTTACCATAGAACACATTTGTGAATAAAAACTAAAGGCATGATAAACAACTTCTACCAAAAAACTGTTGAGCCAAATAGAAATCCTTAATCGTCAAATTCTCCTTCATTTTGTTTATCTCATTAATGTTCCAGGGGCAAACATACATAGAGAAAATTGTCCAAAAATTTTGAAGGTCACTATCTCATAAGAGGTCATGGGTTCAATCCACAGTGGCCACCTACCTAAGATTTAATATCCTAAAAGTTTCCTTGACACCAAAATGTTGTAGGGTTAGACAGATTGTCCCATGAGATTAGTCAAGGTGCATGTAAGTTGATCGGATACTTATGGATATAGAAAAAAAACCACTCTAACACATCTCCACATCAATATCTGTATGATAGTCTGTAGAAAGTCAGAAACTTAATGAGGTTTTCTATAGTTTTTCCTCTTACTTGGCCTTTCAAATTGTAAGAAGAAAAGTTGGATGAGCTTTATGAACCATCATGGATTGGTCTAATGGTAAATAGGAGGAATGACCTTGATAAAAGACTAAGAGGTCATAGGTTTAATCCACGGTGGCCACCTACCTAAAATTTAAGATCTTTAGAGTTTCTTTGACACCCAAATGTTGTAGGATTAGGCGGGATGTCCCGAGAGTCAAGATATGGCCTGGACACTCACGATTAAAAAAAAAATAAAAAAAACAGTTGGATGAGCTTTATGAGTCCATGTGGGTGAACATATAACAAGAAATGAACGATTCCAGTCCAGATTTCTTCTCTTCCTATATACCTAAATCCACAAAACAGAATCACACACAACTCACACAAAGAAACCCTACAAAATTTGGTTGTCTTTAATCTCTAGCCTAGATGACAAAACAGGAACCCAAGAAAACACGAACAGATAACAAACAATACAGAATGAAATGTTATGGAAAGTCACCTCTGAAGTGCAGTAACTGCAGCATCAACTTCGACACGCGATGGAACAGGTCCCAAATCAATTTTGGGAAGAGGTGTCCCAGCTTTTGTATCAATAGCTTCGATTTCTCTTCCATAGCGTAAGCTGCTGCCAGTATCTCCACCGCAATTGCAGGTGGATGAAACTACAGAAGTTGATTTGAACGCCATCGAAGAAGAAGAAGAAGAAGAAGAAGTGGAAATGTGTTGGATTGGGAGTGTAAACGTGGAGAGAATCTGAAAGATTGTCGCCTAATTGATAAGCCATCGGATTTTTTAGTGATACGGGAAGCTTTCCGTACAGGAACCTTCCTTTTTCTAATTTTTAATTCCCAGAAAATGTGTTTGTAACGCTAATGAAACTTCGGTAACATATGTTTCTATTTTTTCATGGAAATTTCCATTTCACATTTATACTATACCTAAAGATATTCCAAGCTTAAAAGGTCAATGTCCATGAAAATTTCGACCTCTCAAAATTATTAAATATTGATAAAAATGTCAGATACAAATATTTATAAAATACTTACTATCTATATTATCCCAGTTATATTTATATTAGTGACATTTTATTTTATTTTTATTTTTTAATATTTCATTGATTTTTTTTAACTATATATATAATGAAAATATTGATTTTTGTTATTACAACAAATAGAATATAGAGGGATTTAAACCTTCGACCTTGAATGAGTGTATATAAGTTACCGCTAAGTTATGTTCAATTAGGTGAAAATACTGATTTACCCTGTATGTATGTCGATGTTGAACTCATAAACATATGAAAATATTAACATGTCGATTGAAATTTAATACCTTAGGGATGATTCATATAATCTTTGTGGGTTAAAATACTATTTTGGTCCATGAACTTTGAGTTTGTTTTACTTTCAATTGTTGAATTTTAGTTCTTAAACTTTGATCTCAAGCATGACATCTATTATATTAATAAAGATTTGACATATGTCCCACAAGTGTTCTAACACTCATATCAAAGATGGACATATTATCAAAACTAGGATGTCCATGCTTCTTTGGATTTTTTTAGTTCAACAAATCTGAGGGTAAAGAATCTAACTTAGGATAAATATATAATAATAATATTTTAACCAATTAAGTTATGCTCAAGTTGATATGATATGTGCACTTTATAATTAAGTGACGTCAAATGACTTTTGTTGATTTAAAAATATTATCATGATCAAGATATCAGTGACACTAAAAAGTAACATGATTAACGTTTTTTACGAGTAATTTTTTGATTTAAAAAAATGGAAATTATGACATTATTTTTTTACATTTTTTTTAACCGTATCTTGTCCTCTCCAACTTGTCTCCCTTATGAGGGAGGTAGTTCCGAAAGCTTCTCATAGCCAATCACCAAAGCATTTTTCTGAATTAATACTTTGACTAAAGTCAATATCTAAACTTTCGGGACATTATGGTTTAATGTATGAATCTATATTTAGTATCTTTCCTTCACATGTGGTTTAGAAGCCTTGTGGTGAAACCTTTTGATTTTCACAAAAGCATTACTTTTCATCCCCATTAAAAAATTCTTTACTGTTAAAAATCAACTCTTTTTGCAAATTTTTAACCAAAAAATCTTTAAAATCCTTCACAAAGCATTAGTTAATTATAACTAAACGTGGTGATTTGGGTTATTTAGACCAATTTTGAATGCACTTTTGGCAATTTCATTTGATCATTTCAAGCAATTGGGAATCCCCAAAAAAGTGGTAAAAACAGGAAGAGAATGAAAGGATTACCAAAATTGCAAAAGGGTTTCATTGATACCTATGATTTAATGTTATAATTAATATTAAGATCGATCTAAGCTTGATTGGCTGTAGAATATTGTTTTGTACATTGTATTTGGTTTGAATTTTGGTGAAGAAAATGGCAGAGGGAACTACACAATCAAGATATGTGAGATTGACGAGAGATCAAGCGCCATTGGAGGATATCACCCCTGGAGAGCTCAATCAACCTATTCAAGTCCCTCAGGTTCTTTTTTTTTTTTTTTTTTCTTTTTCTCCGTTACCAATTTCACGTTCTAAACTTTCGAGTTTGTGTCTATTAGATCATGAACTTTAAAACGTGGTGTAATGGATTCTTCAACTTTTGATTTTGTGTCTATGAGATTTATGAGATTTCAAAATGTCTAATAAGTATCATTCCAACTTTTGATTATGTGTTGAATAGATTCTTGACATATTCACCATTTATGCATAATTGATGAAACCCTAAGTTTTTAATTTTGTATCTAGCGGATTTGTAAATTTAAAAAAGAGTTGTATTGGTGGACAAGGACCTTTTATGACACAAAAGTGAAATTTCGGCTGGGATACAAATTAAATGTTTAAGGTCATATATTAGAGTTCAAAACTAAGAATCTACGATTTTATTAGACACTTTTGTAAAGTTCAGAAATGCAAATAGACACAAAGCTGAAAATTTAATTATTAAAACTTGTAATTTAACTTCTTGTTCCACTAGAAAAACATTTGGAATTGTTGGACGTTGGTTTGTTTACTTTTTTATCTTTGTTGAAATGACTTGAATTTGTATTCTTTAGAGATTATTATTCTATAACTTTGAGCTTTTATTTTTTTGTTACTAGGTTTAGAATTTAAATGGCATGTTATATATAAACTCTCTAACTGTTATCCTGCACATATTTCTATATTCTATCTTATATATTTCTCTTCAAGATAATAAAACAATTTCTCTTCCTACTTGTAGATGTAGCGCTAACACACCATTAGTAAACTATGTAAATCTGTACATTGATTCTTTACTTGTCAATTGTTTATGTCATAATAATCTTTTGGTACAAACAGTTGATTGTTCATAGATGTGAGGAATGTGGGCAACCGCTACCGGAAAGCTATCAACCACCTGCCGATGAAGATTGGACTACTGGCATTTGTGGTTGTCTTGAAGATACTAAATCATGTAATTAAGGATCTTTAAAAAAACTTTTTAAATACTTAAAAAGTCAATCTCGATCCAAACATACTTTTACTAAGGAAATGTTTTTGTTATTGGTGGTACTAGGTTGGAGAGGGCTGTTTTGTCCTTGTGTGTTATTTGGAGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGCCATGCAATGTGTGTAGAAGGAGGAATGGCAGTGGCAGCTGCAACAGCACTTTTCCATGGCATTGATCCCCAAACTTCTTTCTTGATTTCTGAAACCCTCTTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCTTGTTTCGCCAATCATTGCAAAAGAAATATCATCTCAAGGTCTGTCATCTTTAATTTTTTAGCAATCAAATTTAAAATATTAGCAAATATAACACAATATAAAAAAATTTGTAGATATAGCAAATTTTAAATCCAACTCTTAAAATCTCTCATGATAGATTGTATCTCTAGTAGAAGCTATCAACGATAGAATTTATCATTGATAGATTTTGCTATATTCGTCATTTTTTAAAATTTTGCTGTACAGTTAATTTTTTGTTCTAAAAGTGCTACCTGTTACAATTATTCTATTCTAATATACGTTCTTTTTATATATATATATATATATATATATATATATATATATTTTAGAACTCTCCATGTGACCCATGTTTAGTGCATTGCTGCATGCATTGGTGTGCTCTTTGTCAAGAGAATAGAGAGATGAGGAACCATCTTTCTGATAATGTTACCATGCAAATGACTGTTATCAATCCTCCTGCCCTTCAAGAGATGAATACCAACAATGACAATGAAACTGCACCACCCTCTTCCTCATCTCGAGAACTTGCGATCACAACGATTTAG

mRNA sequence

GATCTGTTAGCAGCCATTGAAAACCTTTACAAAGTAATCGATAACCACGAGAATGCAATATGCTTGAATCACAGGAGTTCATCAGCGGCTGAAGCCATTTTGACAGCGATTCAACGTAAGCTGCTGCCAGTATCTCCACCGCAATTGCAGGTGGATGAAACTACAGAAGTTGATTTGAACGCCATCGAAGAAGAAGAAGAAGAAGAAGAAGTGGAAATGTGTTGGATTGGGAGTAATATTGTTTTGTACATTGTATTTGGTTTGAATTTTGGTGAAGAAAATGGCAGAGGGAACTACACAATCAAGATATGTGAGATTGACGAGAGATCAAGCGCCATTGGAGGATATCACCCCTGGAGAGCTCAATCAACCTATTCAAGTTGGAGAGGGCTGTTTTGTCCTTGTGTGTTATTTGGAGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGCCATGCAATGTGTGTAGAAGGAGGAATGGCAGTGGCAGCTGCAACAGCACTTTTCCATGGCATTGATCCCCAAACTTCTTTCTTGATTTCTGAAACCCTCTTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCTTAGAGATGAGGAACCATCTTTCTGATAATGTTACCATGCAAATGACTGTTATCAATCCTCCTGCCCTTCAAGAGATGAATACCAACAATGACAATGAAACTGCACCACCCTCTTCCTCATCTCGAGAACTTGCGATCACAACGATTTAG

Coding sequence (CDS)

GATCTGTTAGCAGCCATTGAAAACCTTTACAAAGTAATCGATAACCACGAGAATGCAATATGCTTGAATCACAGGAGTTCATCAGCGGCTGAAGCCATTTTGACAGCGATTCAACGTAAGCTGCTGCCAGTATCTCCACCGCAATTGCAGGTGGATGAAACTACAGAAGTTGATTTGAACGCCATCGAAGAAGAAGAAGAAGAAGAAGAAGTGGAAATGTGTTGGATTGGGAGTAATATTGTTTTGTACATTGTATTTGGTTTGAATTTTGGTGAAGAAAATGGCAGAGGGAACTACACAATCAAGATATGTGAGATTGACGAGAGATCAAGCGCCATTGGAGGATATCACCCCTGGAGAGCTCAATCAACCTATTCAAGTTGGAGAGGGCTGTTTTGTCCTTGTGTGTTATTTGGAGAAAATGTAGAGACATTGAGAGAAGAAATTCCATGGCAAAATGCATGTGTTTGCCATGCAATGTGTGTAGAAGGAGGAATGGCAGTGGCAGCTGCAACAGCACTTTTCCATGGCATTGATCCCCAAACTTCTTTCTTGATTTCTGAAACCCTCTTGTTTGCTTGGTGGATGTGTGGCATTTATACTGGCTTAGAGATGAGGAACCATCTTTCTGATAATGTTACCATGCAAATGACTGTTATCAATCCTCCTGCCCTTCAAGAGATGAATACCAACAATGACAATGAAACTGCACCACCCTCTTCCTCATCTCGAGAACTTGCGATCACAACGATTTAG

Protein sequence

DLLAAIENLYKVIDNHENAICLNHRSSSAAEAILTAIQRKLLPVSPPQLQVDETTEVDLNAIEEEEEEEEVEMCWIGSNIVLYIVFGLNFGEENGRGNYTIKICEIDERSSAIGGYHPWRAQSTYSSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFLISETLLFAWWMCGIYTGLEMRNHLSDNVTMQMTVINPPALQEMNTNNDNETAPPSSSSRELAITTI

Homology

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BLAST of Lsi09G016370 vs. Swiss-Prot
Match: CNR6_MAIZE (Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-28
Identity = 63/151 (41.72%), Postives = 83/151 (54.97%), Query Frame = 1


Query: 130 GLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFLISET 189
           GLFCPCVLFG NVE +RE+IPW   CVCHA+ VEGG+ +A  TA+FHG+DP+TSFLI E 
Sbjct: 82  GLFCPCVLFGRNVEAVREDIPWTTPCVCHAVFVEGGITLAILTAIFHGVDPRTSFLIGEG 141

Query: 190 LLFAWWMCGIYTGL-----------------------------------EMRNHLSDNVT 246
           L+F+WW+C  YTG+                                   E    L++N  
Sbjct: 142 LVFSWWLCATYTGIFRQGLQRKYHLKNSPCDPCMVHCCLHWCANCQEHRERTGRLAENNA 201

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BLAST of Lsi09G016370 vs. TrEMBL
Match: A0A0A0KDV6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108550 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-53
Identity = 115/168 (68.45%), Postives = 121/168 (72.02%), Query Frame = 1


Query: 122 QSTYSSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ 181
           Q   + WRG+ CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ
Sbjct: 70  QDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ 129

Query: 182 TSFLISETLLFAWWMCGIYTGL-----------------------------------EMR 241
           TSFLISETLLFAWWMCGIYTGL                                   EMR
Sbjct: 130 TSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQENREMR 189

Query: 242 NHLSDNVTMQMTVINPPALQEMNTNNDNETAPPSSS---SRELAITTI 252
           NHLSDN+TMQMTVI+PPALQ MNTN+DNE  PPSSS   S+ELAIT I
Sbjct: 190 NHLSDNITMQMTVIDPPALQAMNTNDDNE-FPPSSSVVPSQELAITPI 236

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BLAST of Lsi09G016370 vs. TrEMBL
Match: B9RD43_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609360 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-43
Identity = 90/150 (60.00%), Postives = 101/150 (67.33%), Query Frame = 1


Query: 130 GLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFLISET 189
           GLFCPCVLFG NVETLRE+IPW NACVCHAMCVEGG+A+AAATA FHGIDP+TSFLI E 
Sbjct: 78  GLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAATAFFHGIDPKTSFLICEG 137

Query: 190 LLFAWWMCGIYTGL-----------------------------------EMRNHLSDNVT 245
           L FAWWMCGIYTGL                                   EM+NHLSDN  
Sbjct: 138 LFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQEHREMKNHLSDNSH 197

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BLAST of Lsi09G016370 vs. TrEMBL
Match: A0A067K997_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14621 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 7.4e-41
Identity = 86/149 (57.72%), Postives = 97/149 (65.10%), Query Frame = 1


Query: 130 GLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFLISET 189
           G FCPCVLFG NVETLR++IPW NACVCHAMCVEGG+A+AAATA FHGIDP+TSFLI E 
Sbjct: 78  GFFCPCVLFGHNVETLRDDIPWSNACVCHAMCVEGGLALAAATAFFHGIDPKTSFLICEG 137

Query: 190 LLFAWWMCGIYTGL-----------------------------------EMRNHLSDNVT 244
           LLFAWWMCGIYTGL                                   EMRNHLSDN  
Sbjct: 138 LLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQEHREMRNHLSDNAA 197

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BLAST of Lsi09G016370 vs. TrEMBL
Match: D7SLS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02460 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 9.7e-41
Identity = 86/160 (53.75%), Postives = 98/160 (61.25%), Query Frame = 1


Query: 121 AQSTYSSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDP 180
           A+   S W GLFCPCVLFG NVE LRE+IPW NACVCHA+CVEGGM +AAATALFHGIDP
Sbjct: 109 AEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLAAATALFHGIDP 168

Query: 181 QTSFLISETLLFAWWMCGIYTGL-----------------------------------EM 240
           +TSFLI E LLF WWMCGIYTGL                                   EM
Sbjct: 169 KTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMHWCAICQEHREM 228

Query: 241 RNHLSDNVTMQMTVINPPALQEMNTNNDNETAPPSSSSRE 246
           + HLS N  M MT++NPP +QEM+   + E AP S +  E
Sbjct: 229 KGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAPSSKNGTE 268

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BLAST of Lsi09G016370 vs. TrEMBL
Match: W9R3S9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021797 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.3e-40
Identity = 87/162 (53.70%), Postives = 103/162 (63.58%), Query Frame = 1


Query: 121 AQSTYSSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDP 180
           A+ T S W GLFCPCVLFG NVETLRE+IPW NACVCHA+CVEGGMAVAAA AL +GIDP
Sbjct: 69  AEDTQSCWTGLFCPCVLFGRNVETLREDIPWTNACVCHAVCVEGGMAVAAAAALINGIDP 128

Query: 181 QTSFLISETLLFAWWMCGIYTGL-----------------------------------EM 240
            T+FLI E+L+FAWWMCGIYTGL                                   EM
Sbjct: 129 HTTFLICESLVFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQEHREM 188

Query: 241 RNHLSDNVTMQMTVINPPALQEMNT--NNDNETAPPSSSSRE 246
           +NHLSD+   QMT++NPP +QEM++  N D E + PS    +
Sbjct: 189 KNHLSDSAASQMTIVNPPPVQEMHSDENKDPERSAPSKHGEQ 230

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BLAST of Lsi09G016370 vs. TAIR10
Match: AT2G45010.1 (AT2G45010.1 PLAC8 family protein)

HSP 1 Score: 146.4 bits (368), Expect = 2.4e-35
Identity = 77/159 (48.43%), Postives = 91/159 (57.23%), Query Frame = 1


Query: 121 AQSTYSSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHG-ID 180
           A+   S   GLFCPCVLFG N+E +REEIPW   CVCHA+CVEGGMA+AA TALF G ID
Sbjct: 70  AEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAVTALFSGYID 129

Query: 181 PQTSFLISETLLFAWWMCGIYTGL-----------------------------------E 240
           PQT+ +I E L FAWWMCGIY+GL                                   E
Sbjct: 130 PQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLKNAPCDHCMVHCCLHWCALCQEHRE 189

Query: 241 MRNHLSDNVTMQMTVINPPALQEMNTNNDNETAPPSSSS 244
           M+NHLSD      T ++PP +QEMNT    + +  SSSS
Sbjct: 190 MKNHLSDTEASSSTTMDPPPVQEMNTEERRDASSSSSSS 228

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BLAST of Lsi09G016370 vs. TAIR10
Match: AT5G51400.1 (AT5G51400.1 PLAC8 family protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-28
Identity = 71/162 (43.83%), Postives = 84/162 (51.85%), Query Frame = 1


Query: 126 SSWRGLFCPCVLFGENVETLR-EEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSF 185
           S W GLFCP VLFG   ETL  EE  W+ AC+CH++ VEGG+  A+  A   GIDP TS 
Sbjct: 75  SFWLGLFCPSVLFGRVYETLSDEETSWKKACICHSIVVEGGLTAASMLACVPGIDPHTSL 134

Query: 186 LISETLLFAWWMCGIYTG-----------------------------------LEMRNHL 245
           LI E LLF WWMCGIYTG                                    EM+N L
Sbjct: 135 LIWEGLLFVWWMCGIYTGNVRQTLQRKYHLQNAPCDPCMVHCCLHFCAVCQEHREMKNRL 194

Query: 246 SDNVTMQMTVINPPALQEMNTNNDNE-----TAPPSSSSREL 247
           SDN  M MTVINPP +QEM+ + D +     + P S  S +L
Sbjct: 195 SDNFVMPMTVINPPPVQEMSASGDRDQHHHNSVPVSHHSSDL 236

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BLAST of Lsi09G016370 vs. NCBI nr
Match: gi|659120414|ref|XP_008460181.1| (PREDICTED: cell number regulator 6 [Cucumis melo])

HSP 1 Score: 220.7 bits (561), Expect = 2.9e-54
Identity = 116/168 (69.05%), Postives = 122/168 (72.62%), Query Frame = 1


Query: 122 QSTYSSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ 181
           Q   + WRG+FCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ
Sbjct: 70  QDPKTCWRGMFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ 129

Query: 182 TSFLISETLLFAWWMCGIYTGL-----------------------------------EMR 241
           TSFLISETL+FAWWMCGIYTGL                                   EMR
Sbjct: 130 TSFLISETLMFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQENREMR 189

Query: 242 NHLSDNVTMQMTVINPPALQEMNTNNDNETAPPSSS---SRELAITTI 252
           NHLSDN+TMQMTVI+PPALQ MNTN+DNE  PPSSS   SRELAIT I
Sbjct: 190 NHLSDNLTMQMTVIDPPALQAMNTNDDNE-PPPSSSIVPSRELAITPI 236

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BLAST of Lsi09G016370 vs. NCBI nr
Match: gi|449445702|ref|XP_004140611.1| (PREDICTED: cell number regulator 6 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 1.9e-53
Identity = 115/168 (68.45%), Postives = 121/168 (72.02%), Query Frame = 1


Query: 122 QSTYSSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ 181
           Q   + WRG+ CPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ
Sbjct: 70  QDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQ 129

Query: 182 TSFLISETLLFAWWMCGIYTGL-----------------------------------EMR 241
           TSFLISETLLFAWWMCGIYTGL                                   EMR
Sbjct: 130 TSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQENREMR 189

Query: 242 NHLSDNVTMQMTVINPPALQEMNTNNDNETAPPSSS---SRELAITTI 252
           NHLSDN+TMQMTVI+PPALQ MNTN+DNE  PPSSS   S+ELAIT I
Sbjct: 190 NHLSDNITMQMTVIDPPALQAMNTNDDNE-FPPSSSVVPSQELAITPI 236

[Close]

BLAST of Lsi09G016370 vs. NCBI nr
Match: gi|1009140455|ref|XP_015887662.1| (PREDICTED: cell number regulator 6 [Ziziphus jujuba])

HSP 1 Score: 186.0 bits (471), Expect = 7.9e-44
Identity = 90/147 (61.22%), Postives = 100/147 (68.03%), Query Frame = 1


Query: 126 SSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFL 185
           S W GLFCPCVLFG NVETLR+EIPW NACVCHA+CVEGGMAVAAATALFHGIDP+TSFL
Sbjct: 76  SCWTGLFCPCVLFGRNVETLRDEIPWTNACVCHAICVEGGMAVAAATALFHGIDPKTSFL 135

Query: 186 ISETLLFAWWMCGIYTGL-----------------------------------EMRNHLS 238
           I E+L FAWWMCGIYTGL                                   EMRNHLS
Sbjct: 136 ICESLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCLHWCALCQEHREMRNHLS 195

[Close]

BLAST of Lsi09G016370 vs. NCBI nr
Match: gi|672186233|ref|XP_008813031.1| (PREDICTED: cell number regulator 6-like [Phoenix dactylifera])

HSP 1 Score: 183.7 bits (465), Expect = 3.9e-43
Identity = 88/147 (59.86%), Postives = 99/147 (67.35%), Query Frame = 1


Query: 126 SSWRGLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFL 185
           S W GLFCPCVLFG NVE L+EEIPW+NAC+CHA+CVEGG+A+AAATA FHGIDPQTSFL
Sbjct: 75  SCWTGLFCPCVLFGHNVEKLQEEIPWKNACICHAICVEGGIALAAATAFFHGIDPQTSFL 134

Query: 186 ISETLLFAWWMCGIYTGL-----------------------------------EMRNHLS 238
           I E LLF+WWMCGIYTGL                                   EM+ HLS
Sbjct: 135 IGEGLLFSWWMCGIYTGLYRQSLQKKYHLKNSPCDPCMVHCCMHWCANCQEHREMKGHLS 194

[Close]

BLAST of Lsi09G016370 vs. NCBI nr
Match: gi|255541136|ref|XP_002511632.1| (PREDICTED: cell number regulator 6 isoform X3 [Ricinus communis])

HSP 1 Score: 183.0 bits (463), Expect = 6.6e-43
Identity = 90/150 (60.00%), Postives = 101/150 (67.33%), Query Frame = 1


Query: 130 GLFCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAATALFHGIDPQTSFLISET 189
           GLFCPCVLFG NVETLRE+IPW NACVCHAMCVEGG+A+AAATA FHGIDP+TSFLI E 
Sbjct: 78  GLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAATAFFHGIDPKTSFLICEG 137

Query: 190 LLFAWWMCGIYTGL-----------------------------------EMRNHLSDNVT 245
           L FAWWMCGIYTGL                                   EM+NHLSDN  
Sbjct: 138 LFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWCALCQEHREMKNHLSDNSH 197

The following BLAST results are available for this feature:

BLAST of Lsi09G016370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNR6_MAIZE	1.2e-28	41.72	Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1	[more]

BLAST of Lsi09G016370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV6_CUCSA	1.3e-53	68.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G108550 PE=4 SV=1	[more]
B9RD43_RICCO	4.6e-43	60.00	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1609360 PE=4 SV=1	[more]
A0A067K997_JATCU	7.4e-41	57.72	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14621 PE=4 SV=1	[more]
D7SLS5_VITVI	9.7e-41	53.75	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02460 PE=4 SV=...	[more]
W9R3S9_9ROSA	1.3e-40	53.70	Uncharacterized protein OS=Morus notabilis GN=L484_021797 PE=4 SV=1	[more]

BLAST of Lsi09G016370 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45010.1	2.4e-35	48.43	PLAC8 family protein	[more]
AT5G51400.1	1.3e-28	43.83	PLAC8 family protein	[more]

BLAST of Lsi09G016370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120414\|ref\|XP_008460181.1\|	2.9e-54	69.05	PREDICTED: cell number regulator 6 [Cucumis melo]	[more]
gi\|449445702\|ref\|XP_004140611.1\|	1.9e-53	68.45	PREDICTED: cell number regulator 6 [Cucumis sativus]	[more]
gi\|1009140455\|ref\|XP_015887662.1\|	7.9e-44	61.22	PREDICTED: cell number regulator 6 [Ziziphus jujuba]	[more]
gi\|672186233\|ref\|XP_008813031.1\|	3.9e-43	59.86	PREDICTED: cell number regulator 6-like [Phoenix dactylifera]	[more]
gi\|255541136\|ref\|XP_002511632.1\|	6.6e-43	60.00	PREDICTED: cell number regulator 6 isoform X3 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G016370.1	Lsi09G016370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 126..245 score: 6.4
None	No IPR available	PANTHER	PTHR15907:SF35	GENE1000 PROTEIN-RELATED	coord: 126..245 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G016370	Csa6G108550	Cucumber (Chinese Long) v2	culsiB402
Lsi09G016370	CSPI06G08700	Wild cucumber (PI 183967)	cpilsiB404
Lsi09G016370	Cucsa.120690	Cucumber (Gy14) v1	cgylsiB169
Lsi09G016370	CmaCh08G008590	Cucurbita maxima (Rimu)	cmalsiB817
Lsi09G016370	Cla006675	Watermelon (97103) v1	lsiwmB036
Lsi09G016370	MELO3C022235	Melon (DHL92) v3.5.1	lsimeB017
Lsi09G016370	ClCG06G002950	Watermelon (Charleston Gray)	lsiwcgB029
Lsi09G016370	MELO3C022235.2	Melon (DHL92) v3.6.1	lsimedB019
Lsi09G016370	Cla97C06G112340	Watermelon (97103) v2	lsiwmbB026
Lsi09G016370	Bhi12G001924	Wax gourd	lsiwgoB011
Lsi09G016370	Cp4.1LG17g03930	Cucurbita pepo (Zucchini)	cpelsiB248
Lsi09G016370	CsGy6G008800	Cucumber (Gy14) v2	cgyblsiB366
Lsi09G016370	Carg13873	Silver-seed gourd	carlsiB545
Lsi09G016370	CsaV3_6G009070	Cucumber (Chinese Long) v3	cuclsiB424

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G016370	Cucurbita maxima (Rimu)	cmalsiB331
Lsi09G016370	Cucurbita moschata (Rifu)	cmolsiB320
Lsi09G016370	Cucurbita moschata (Rifu)	cmolsiB803
Lsi09G016370	Cucurbita pepo (Zucchini)	cpelsiB101
Lsi09G016370	Silver-seed gourd	carlsiB820