CSPI05G04300 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G04300
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Protein of unknown function, DUF538
Location	Chr5 : 4255256 .. 4255819 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCATACAAATACAAAGAAAAACAAAGCAAAAGAGAAAATTTAAAAAGGGCAAAACCCTTATCCTAAATTACTCTCAATCTTCACCAATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACACGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTATGTTGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGAGTGGTTTTTTTT

mRNA sequence

ATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACACGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTATGTTGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGA

Coding sequence (CDS)

ATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACACGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTATGTTGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGA

Homology

[Close]

BLAST of CSPI05G04300 vs. TrEMBL
Match: A0A0A0KK90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148540 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 2.8e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM
Sbjct: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK
Sbjct: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120

Query: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE 155
           KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE
Sbjct: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE 154

[Close]

BLAST of CSPI05G04300 vs. TrEMBL
Match: V4SX21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022654mg PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.0e-61
Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           M+++  R+DERAGAEI YG EECYR S+ELL++LGFP GVLPLQ+LEECG VRETGF+WM
Sbjct: 1   MSSIKAREDERAGAEIVYGAEECYRHSIELLEELGFPKGVLPLQDLEECGRVRETGFVWM 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           KQ+ PYEHFFE TN+RV+YA EVTAYVEK KMKKMTGVKS+Q+ LWVPI EMSIED S  
Sbjct: 61  KQRAPYEHFFEGTNTRVSYAAEVTAYVEKFKMKKMTGVKSKQMFLWVPISEMSIEDASSN 120

Query: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLE 151
           KI FKT MGIGKSFPITAFM DEEK  YL+
Sbjct: 121 KIHFKTPMGIGKSFPITAFMTDEEKHKYLD 150

[Close]

BLAST of CSPI05G04300 vs. TrEMBL
Match: A9PAE0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s14640g PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.0e-60
Identity = 109/148 (73.65%), Postives = 132/148 (89.19%), Query Frame = 1


Query: 7   RQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPY 66
           ++DERAGAEI YGHEEC+R S+ELL++LGFP GVLPL++LEECG V+ETGF+WMKQK PY
Sbjct: 8   KEDERAGAEIVYGHEECHRHSIELLEELGFPKGVLPLKDLEECGRVKETGFVWMKQKAPY 67

Query: 67  EHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKICFKT 126
           EHFF  +N++V+YATEVTAYVEK KMKKMTG+KS+Q+ LWVP+ EMSIE+PS+KKI FKT
Sbjct: 68  EHFFVGSNTKVSYATEVTAYVEKFKMKKMTGIKSKQMFLWVPLSEMSIENPSRKKILFKT 127

Query: 127 NMGIGKSFPITAFMVDEEKKMYLEKLEE 155
            MGIGKSFP++AFM DEEK+   EKLEE
Sbjct: 128 PMGIGKSFPVSAFMTDEEKQEQQEKLEE 155

[Close]

BLAST of CSPI05G04300 vs. TrEMBL
Match: A0A061G3B3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015652 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.4e-60
Identity = 113/143 (79.02%), Postives = 125/143 (87.41%), Query Frame = 1


Query: 9   DERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPYEH 68
           DERAGAEI YG EECYR S+ELL++LGFP GVLPLQ+LEECG VRETGF+WMKQK PYEH
Sbjct: 10  DERAGAEIVYGAEECYRHSIELLEELGFPKGVLPLQDLEECGRVRETGFVWMKQKAPYEH 69

Query: 69  FFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKICFKTNM 128
           FF  TN+RV+YATEVT+YVEK KMKKMTGVKS+Q+ LWVPI EMSIEDP+  KI FKT M
Sbjct: 70  FFAGTNTRVSYATEVTSYVEKFKMKKMTGVKSKQVFLWVPITEMSIEDPASNKIYFKTPM 129

Query: 129 GIGKSFPITAFMVDEEKKMYLEK 152
           GIGKSFPITAFM DEEK  YLE+
Sbjct: 130 GIGKSFPITAFMTDEEKHKYLEE 152

[Close]

BLAST of CSPI05G04300 vs. TrEMBL
Match: M5WB22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012800mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.7e-59
Identity = 109/154 (70.78%), Postives = 133/154 (86.36%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           MA+    +D+RAGAEI YG E+CYR S++LL++LGFP GVLPLQ+L ECG VRETGF+WM
Sbjct: 1   MASNKQLEDKRAGAEIVYGPEDCYRHSIDLLEELGFPKGVLPLQDLVECGRVRETGFVWM 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           KQK+PYEHFF  +N+RV+YATEVT YVEKLKMKKMTG+KS+Q+ LWVPI EMSI+DP+ K
Sbjct: 61  KQKRPYEHFFVGSNTRVSYATEVTGYVEKLKMKKMTGIKSKQVFLWVPISEMSIDDPASK 120

Query: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE 155
           KI FKT MGIGKSFPITAFM +EEK+ +LE++ E
Sbjct: 121 KIVFKTPMGIGKSFPITAFMTEEEKQKHLEQVNE 154

[Close]

BLAST of CSPI05G04300 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538)

HSP 1 Score: 207.2 bits (526), Expect = 7.2e-54
Identity = 97/142 (68.31%), Postives = 117/142 (82.39%), Query Frame = 1


Query: 10  ERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPYEHF 69
           ER GAEI YG EECY++S+ELL++LGFP GV+PL+ L ECG VR TG++WMKQ  PYEHF
Sbjct: 12  EREGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPYEHF 71

Query: 70  FEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKICFKTNMG 129
           FE TN+RV+Y  EVTAYV+K  MKKMTGVKS+Q+ LWVPI EMS+E+P  KKI FKT MG
Sbjct: 72  FEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFKTPMG 131

Query: 130 IGKSFPITAFMVDEEKK-MYLE 151
           IG+SFP+T FM +EEK+  YLE
Sbjct: 132 IGRSFPVTGFMDEEEKRNFYLE 153

[Close]

BLAST of CSPI05G04300 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32
Identity = 68/142 (47.89%), Postives = 97/142 (68.31%), Query Frame = 1


Query: 11  RAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPYEHFF 70
           RA AE   G E C  ++ E LK++  P+G+LPL+++EE G  RETG +W+KQKK   H F
Sbjct: 9   RARAEKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLKQKKSITHKF 68

Query: 71  EKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDP-SKKKICFKTNMG 130
           E     V+YATEV A VE  K+KK+TGVK+++LL+WV + E+ +E P S  KI F+T  G
Sbjct: 69  EAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSGKINFRTPTG 128

Query: 131 IGKSFPITAFMVDEEKKMYLEK 152
           + ++FP++AF+V E +K   EK
Sbjct: 129 LSRTFPVSAFVVPEVEKPATEK 150

[Close]

BLAST of CSPI05G04300 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538)

HSP 1 Score: 131.3 bits (329), Expect = 5.0e-31
Identity = 64/137 (46.72%), Postives = 95/137 (69.34%), Query Frame = 1


Query: 8   QDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPYE 67
           ++ RA AE+  G E C  ++   LK++  P+G+LPL+++EE G  RE+G +W+KQKK   
Sbjct: 6   EEVRAKAEMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLKQKKSIT 65

Query: 68  HFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKICFKTN 127
           H F + +  V+Y TEVTA VE  K+KK+TGVK+++LL+WV I E+  E+P   KI FKT 
Sbjct: 66  HKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEP-PTKITFKTP 125

Query: 128 MGIGKSFPITAFMVDEE 145
             + ++FP+TAF+V EE
Sbjct: 126 TTLSRTFPVTAFIVPEE 141

[Close]

BLAST of CSPI05G04300 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 52/143 (36.36%), Postives = 87/143 (60.84%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           M++   + D+R GAEI  G   C +++ E+L  +  P G+LPL  + E G  + TG++W+
Sbjct: 1   MSSQETKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWI 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           K K   +H F+     V+Y +EVTA +E  +M ++TG+KS+++L+WV I E+ +      
Sbjct: 61  KIKNKVQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPT 120

Query: 121 KICFKTNMGIGKSFPITAFMVDE 144
           +I F    G+ ++FP+TAF  DE
Sbjct: 121 QITFANPTGLSRTFPVTAFEEDE 143

[Close]

BLAST of CSPI05G04300 vs. TAIR10
Match: AT5G49600.1 (AT5G49600.1 Protein of unknown function, DUF538)

HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22
Identity = 50/138 (36.23%), Postives = 86/138 (62.32%), Query Frame = 1


Query: 11  RAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMK--------Q 70
           +A AE+ +G + C  +   LL ++G P+ +L  +E++ECG V++TGF+W+K        Q
Sbjct: 7   KAKAEVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHKEKKKEDQ 66

Query: 71  KKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKI 130
           K+ Y+      N  V +  EVTAY E  ++KK+TGVK+++ ++W+ +GE+ + + S   I
Sbjct: 67  KRRYQDLLRFDNVVVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQV-NRSSGLI 126

Query: 131 CFKTNMG-IGKSFPITAF 140
            FKT +G + KS P++ F
Sbjct: 127 TFKTEVGLLSKSLPLSVF 143

[Close]

BLAST of CSPI05G04300 vs. NCBI nr
Match: gi|778699230|ref|XP_004143841.2| (PREDICTED: uncharacterized protein LOC101223048 [Cucumis sativus])

HSP 1 Score: 315.8 bits (808), Expect = 4.1e-83
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM
Sbjct: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK
Sbjct: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120

Query: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE 155
           KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE
Sbjct: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE 154

[Close]

BLAST of CSPI05G04300 vs. NCBI nr
Match: gi|659074141|ref|XP_008437444.1| (PREDICTED: uncharacterized protein LOC103482858 [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 2.5e-80
Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           MATVIPRQDERAGAEI YGHEECYR+SVELLKDLGFPSGVLPLQELEECG+VRETGFIWM
Sbjct: 1   MATVIPRQDERAGAEIVYGHEECYRKSVELLKDLGFPSGVLPLQELEECGMVRETGFIWM 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           KQKKPYEHFFEKTNSRVAYATEVTAYVEK KMKKMTGVKSRQLLLWVPIGEMSIEDPSKK
Sbjct: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKFKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120

Query: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE 155
           KICFKTNMGIGKSFPITAF+VDEEKK YLEKLEE
Sbjct: 121 KICFKTNMGIGKSFPITAFIVDEEKKRYLEKLEE 154

[Close]

BLAST of CSPI05G04300 vs. NCBI nr
Match: gi|567893480|ref|XP_006439228.1| (hypothetical protein CICLE_v10022654mg [Citrus clementina])

HSP 1 Score: 242.7 bits (618), Expect = 4.4e-61
Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           M+++  R+DERAGAEI YG EECYR S+ELL++LGFP GVLPLQ+LEECG VRETGF+WM
Sbjct: 1   MSSIKAREDERAGAEIVYGAEECYRHSIELLEELGFPKGVLPLQDLEECGRVRETGFVWM 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           KQ+ PYEHFFE TN+RV+YA EVTAYVEK KMKKMTGVKS+Q+ LWVPI EMSIED S  
Sbjct: 61  KQRAPYEHFFEGTNTRVSYAAEVTAYVEKFKMKKMTGVKSKQMFLWVPISEMSIEDASSN 120

Query: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLE 151
           KI FKT MGIGKSFPITAFM DEEK  YL+
Sbjct: 121 KIHFKTPMGIGKSFPITAFMTDEEKHKYLD 150

[Close]

BLAST of CSPI05G04300 vs. NCBI nr
Match: gi|568844851|ref|XP_006476294.1| (PREDICTED: uncharacterized protein LOC102610275 [Citrus sinensis])

HSP 1 Score: 242.7 bits (618), Expect = 4.4e-61
Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 1


Query: 1   MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWM 60
           M+++  R+DERAGAEI YG EECYR S+ELL++LGFP GVLPLQ+LEECG VRETGF+WM
Sbjct: 1   MSSIRAREDERAGAEIVYGAEECYRHSIELLEELGFPKGVLPLQDLEECGRVRETGFVWM 60

Query: 61  KQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKK 120
           KQ+ PYEHFFE TN+RV+YA EVTAYVEK KMKKMTGVKS+Q+ LWVPI EMSIED S  
Sbjct: 61  KQRAPYEHFFEGTNTRVSYAAEVTAYVEKFKMKKMTGVKSKQMFLWVPISEMSIEDASSN 120

Query: 121 KICFKTNMGIGKSFPITAFMVDEEKKMYLE 151
           KI FKT MGIGKSFPITAFM DEEK  YL+
Sbjct: 121 KIHFKTPMGIGKSFPITAFMTDEEKHKYLD 150

[Close]

BLAST of CSPI05G04300 vs. NCBI nr
Match: gi|566162662|ref|XP_002303689.2| (hypothetical protein POPTR_0003s14640g [Populus trichocarpa])

HSP 1 Score: 240.0 bits (611), Expect = 2.8e-60
Identity = 109/148 (73.65%), Postives = 132/148 (89.19%), Query Frame = 1


Query: 7   RQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPY 66
           ++DERAGAEI YGHEEC+R S+ELL++LGFP GVLPL++LEECG V+ETGF+WMKQK PY
Sbjct: 8   KEDERAGAEIVYGHEECHRHSIELLEELGFPKGVLPLKDLEECGRVKETGFVWMKQKAPY 67

Query: 67  EHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKICFKT 126
           EHFF  +N++V+YATEVTAYVEK KMKKMTG+KS+Q+ LWVP+ EMSIE+PS+KKI FKT
Sbjct: 68  EHFFVGSNTKVSYATEVTAYVEKFKMKKMTGIKSKQMFLWVPLSEMSIENPSRKKILFKT 127

Query: 127 NMGIGKSFPITAFMVDEEKKMYLEKLEE 155
            MGIGKSFP++AFM DEEK+   EKLEE
Sbjct: 128 PMGIGKSFPVSAFMTDEEKQEQQEKLEE 155

The following BLAST results are available for this feature:

BLAST of CSPI05G04300 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI05G04300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK90_CUCSA	2.8e-83	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148540 PE=4 SV=1	[more]
V4SX21_9ROSI	3.0e-61	76.00	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022654mg PE=4 SV=1	[more]
A9PAE0_POPTR	2.0e-60	73.65	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s14640g PE=2 SV=1	[more]
A0A061G3B3_THECC	3.4e-60	79.02	Uncharacterized protein OS=Theobroma cacao GN=TCM_015652 PE=4 SV=1	[more]
M5WB22_PRUPE	3.7e-59	70.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012800mg PE=4 SV=1	[more]

BLAST of CSPI05G04300 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24130.1	7.2e-54	68.31	Protein of unknown function, DUF538	[more]
AT1G56580.1	1.2e-32	47.89	Protein of unknown function, DUF538	[more]
AT1G09310.1	5.0e-31	46.72	Protein of unknown function, DUF538	[more]
AT5G46230.1	1.2e-27	36.36	Protein of unknown function, DUF538	[more]
AT5G49600.1	1.5e-22	36.23	Protein of unknown function, DUF538	[more]

BLAST of CSPI05G04300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778699230\|ref\|XP_004143841.2\|	4.1e-83	100.00	PREDICTED: uncharacterized protein LOC101223048 [Cucumis sativus]	[more]
gi\|659074141\|ref\|XP_008437444.1\|	2.5e-80	96.10	PREDICTED: uncharacterized protein LOC103482858 [Cucumis melo]	[more]
gi\|567893480\|ref\|XP_006439228.1\|	4.4e-61	76.00	hypothetical protein CICLE_v10022654mg [Citrus clementina]	[more]
gi\|568844851\|ref\|XP_006476294.1\|	4.4e-61	76.00	PREDICTED: uncharacterized protein LOC102610275 [Citrus sinensis]	[more]
gi\|566162662\|ref\|XP_002303689.2\|	2.8e-60	73.65	hypothetical protein POPTR_0003s14640g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G04300.1	CSPI05G04300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 11..147 score: 4.4
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 28..139 score: 2.8
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 9..145 score: 1.31
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 1..150 score: 4.4
None	No IPR available	PANTHER	PTHR31676:SF20	SUBFAMILY NOT NAMED	coord: 1..150 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G04300	Cla011332	Watermelon (97103) v1	cpiwmB416
CSPI05G04300	Csa5G148540	Cucumber (Chinese Long) v2	cpicuB240
CSPI05G04300	MELO3C005784	Melon (DHL92) v3.5.1	cpimeB348
CSPI05G04300	ClCG01G001530	Watermelon (Charleston Gray)	cpiwcgB379
CSPI05G04300	Lsi09G001400	Bottle gourd (USVL1VR-Ls)	cpilsiB322
CSPI05G04300	MELO3C005784.2	Melon (DHL92) v3.6.1	cpimedB338
CSPI05G04300	CsaV3_5G001680	Cucumber (Chinese Long) v3	cpicucB285
CSPI05G04300	Cla97C01G001540	Watermelon (97103) v2	cpiwmbB349
CSPI05G04300	Bhi12G000083	Wax gourd	cpiwgoB439
CSPI05G04300	CmaCh15G013130	Cucurbita maxima (Rimu)	cmacpiB303
CSPI05G04300	CmoCh15G013780	Cucurbita moschata (Rifu)	cmocpiB295
CSPI05G04300	Cp4.1LG00g00670	Cucurbita pepo (Zucchini)	cpecpiB014
CSPI05G04300	CsGy5G001550	Cucumber (Gy14) v2	cgybcpiB226
CSPI05G04300	Carg21305	Silver-seed gourd	carcpiB0395

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G04300	Silver-seed gourd	carcpiB0747
CSPI05G04300	Cucumber (Gy14) v1	cgycpiB457
CSPI05G04300	Cucurbita maxima (Rimu)	cmacpiB617
CSPI05G04300	Cucurbita moschata (Rifu)	cmocpiB610
CSPI05G04300	Cucurbita pepo (Zucchini)	cpecpiB732