Csa5G148540 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAAACAAAGCAAAAGAGAAAATTTAAAAAGGGCAAAACCCTTATCCTAAATTACTCTCAATCTTCACCAATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACATGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTACGTCGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGAGTG ATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACATGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTACGTCGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGA ATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACATGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTACGTCGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGA MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE*
BLAST of Csa5G148540 vs. TrEMBL
Match: A0A0A0KK90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G148540 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.1e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Csa5G148540 vs. TrEMBL
Match: V4SX21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022654mg PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 1.5e-60 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 1
BLAST of Csa5G148540 vs. TrEMBL
Match: A9PAE0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s14640g PE=2 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 4.4e-60 Identity = 109/148 (73.65%), Postives = 132/148 (89.19%), Query Frame = 1
BLAST of Csa5G148540 vs. TrEMBL
Match: A0A061G3B3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_015652 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 9.8e-60 Identity = 113/143 (79.02%), Postives = 125/143 (87.41%), Query Frame = 1
BLAST of Csa5G148540 vs. TrEMBL
Match: M5WB22_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012800mg PE=4 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.4e-58 Identity = 109/154 (70.78%), Postives = 133/154 (86.36%), Query Frame = 1
BLAST of Csa5G148540 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538) HSP 1 Score: 205.3 bits (521), Expect = 2.7e-53 Identity = 97/142 (68.31%), Postives = 115/142 (80.99%), Query Frame = 1
BLAST of Csa5G148540 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538) HSP 1 Score: 134.8 bits (338), Expect = 4.5e-32 Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 1
BLAST of Csa5G148540 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538) HSP 1 Score: 129.4 bits (324), Expect = 1.9e-30 Identity = 64/137 (46.72%), Postives = 93/137 (67.88%), Query Frame = 1
BLAST of Csa5G148540 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538) HSP 1 Score: 117.5 bits (293), Expect = 7.5e-27 Identity = 52/143 (36.36%), Postives = 86/143 (60.14%), Query Frame = 1
BLAST of Csa5G148540 vs. TAIR10
Match: AT5G49600.1 (AT5G49600.1 Protein of unknown function, DUF538) HSP 1 Score: 101.3 bits (251), Expect = 5.5e-22 Identity = 50/138 (36.23%), Postives = 84/138 (60.87%), Query Frame = 1
BLAST of Csa5G148540 vs. NCBI nr
Match: gi|778699230|ref|XP_004143841.2| (PREDICTED: uncharacterized protein LOC101223048 [Cucumis sativus]) HSP 1 Score: 313.9 bits (803), Expect = 1.5e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 1
BLAST of Csa5G148540 vs. NCBI nr
Match: gi|659074141|ref|XP_008437444.1| (PREDICTED: uncharacterized protein LOC103482858 [Cucumis melo]) HSP 1 Score: 304.7 bits (779), Expect = 9.4e-80 Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 1
BLAST of Csa5G148540 vs. NCBI nr
Match: gi|567893480|ref|XP_006439228.1| (hypothetical protein CICLE_v10022654mg [Citrus clementina]) HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 1
BLAST of Csa5G148540 vs. NCBI nr
Match: gi|568844851|ref|XP_006476294.1| (PREDICTED: uncharacterized protein LOC102610275 [Citrus sinensis]) HSP 1 Score: 240.4 bits (612), Expect = 2.2e-60 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 1
BLAST of Csa5G148540 vs. NCBI nr
Match: gi|566162662|ref|XP_002303689.2| (hypothetical protein POPTR_0003s14640g [Populus trichocarpa]) HSP 1 Score: 238.8 bits (608), Expect = 6.3e-60 Identity = 109/148 (73.65%), Postives = 132/148 (89.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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