CsaV3_5G001680 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACATGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTACGTCGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGA ATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACATGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTACGTCGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGA ATGGCCACAGTGATTCCACGACAAGATGAGCGAGCCGGAGCAGAGATCGCATACGGACATGAAGAATGCTACCGTAGATCGGTGGAGCTTTTGAAGGATCTTGGTTTCCCGAGCGGTGTATTGCCATTGCAAGAGCTTGAGGAGTGTGGGATTGTGAGGGAGACTGGGTTCATTTGGATGAAGCAAAAGAAACCCTACGAGCACTTTTTCGAGAAGACGAACTCGCGTGTTGCGTATGCGACTGAGGTGACGGCGTACGTCGAGAAGTTGAAGATGAAGAAGATGACGGGTGTGAAGAGTAGGCAGCTTCTTTTGTGGGTTCCAATTGGGGAGATGAGTATTGAGGATCCAAGTAAGAAGAAGATTTGTTTTAAAACTAATATGGGGATTGGAAAATCGTTTCCTATAACCGCGTTCATGGTGGATGAAGAGAAGAAAATGTATTTGGAGAAGCTTGAGGAATGA MATVIPRQDERAGAEIAYGHEECYRRSVELLKDLGFPSGVLPLQELEECGIVRETGFIWMKQKKPYEHFFEKTNSRVAYATEVTAYVEKLKMKKMTGVKSRQLLLWVPIGEMSIEDPSKKKICFKTNMGIGKSFPITAFMVDEEKKMYLEKLEE
BLAST of CsaV3_5G001680 vs. NCBI nr
Match: XP_004143841.2 (PREDICTED: uncharacterized protein LOC101223048 [Cucumis sativus] >KGN49983.1 hypothetical protein Csa_5G148540 [Cucumis sativus]) HSP 1 Score: 315.8 bits (808), Expect = 7.9e-83 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. NCBI nr
Match: XP_008437444.1 (PREDICTED: uncharacterized protein LOC103482858 [Cucumis melo]) HSP 1 Score: 306.6 bits (784), Expect = 4.8e-80 Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. NCBI nr
Match: XP_023520533.1 (uncharacterized protein LOC111783942 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 280.0 bits (715), Expect = 4.8e-72 Identity = 134/154 (87.01%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. NCBI nr
Match: XP_022928854.1 (uncharacterized protein LOC111435645 [Cucurbita moschata]) HSP 1 Score: 278.1 bits (710), Expect = 1.8e-71 Identity = 133/154 (86.36%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. NCBI nr
Match: XP_022970114.1 (uncharacterized protein LOC111469104 [Cucurbita maxima]) HSP 1 Score: 276.9 bits (707), Expect = 4.1e-71 Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TAIR10
Match: AT4G24130.1 (Protein of unknown function, DUF538) HSP 1 Score: 207.2 bits (526), Expect = 7.2e-54 Identity = 97/142 (68.31%), Postives = 117/142 (82.39%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TAIR10
Match: AT1G56580.1 (Protein of unknown function, DUF538) HSP 1 Score: 136.7 bits (343), Expect = 1.2e-32 Identity = 68/142 (47.89%), Postives = 97/142 (68.31%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TAIR10
Match: AT1G09310.1 (Protein of unknown function, DUF538) HSP 1 Score: 131.3 bits (329), Expect = 5.0e-31 Identity = 64/137 (46.72%), Postives = 95/137 (69.34%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TAIR10
Match: AT5G46230.1 (Protein of unknown function, DUF538) HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27 Identity = 52/143 (36.36%), Postives = 87/143 (60.84%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TAIR10
Match: AT5G49600.1 (Protein of unknown function, DUF538) HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22 Identity = 50/138 (36.23%), Postives = 86/138 (62.32%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TrEMBL
Match: tr|A0A0A0KK90|A0A0A0KK90_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148540 PE=4 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 5.2e-83 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TrEMBL
Match: tr|A0A1S3ATP5|A0A1S3ATP5_CUCME (uncharacterized protein LOC103482858 OS=Cucumis melo OX=3656 GN=LOC103482858 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 3.2e-80 Identity = 148/154 (96.10%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TrEMBL
Match: tr|V4SX21|V4SX21_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022654mg PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 5.6e-61 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TrEMBL
Match: tr|A0A2H5QKM3|A0A2H5QKM3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_236160 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 5.6e-61 Identity = 114/150 (76.00%), Postives = 129/150 (86.00%), Query Frame = 0
BLAST of CsaV3_5G001680 vs. TrEMBL
Match: tr|A0A200Q2U3|A0A200Q2U3_9MAGN (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_1719g100 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.3e-60 Identity = 113/150 (75.33%), Postives = 131/150 (87.33%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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