CSPI04G10870 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI04G10870
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr4 : 9175127 .. 9175564 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTGGGTTAATTGGAGATTGTTATGGGGAGGAGGCTTTACCCTAATTCTTCTTGTAAGCTTTCATTTTCTCGCCGGCCAAACAGCGGTGGAAAAGGTTGAAATGAAGGAATTCCAACGGTTTCATTTTGGAATGTATCCAAAAAATATTCCTATTCCTCCCTCTGCACCCAGCAACAGAAATTCGGACCATTCTCCTTCTCCTCCGCCGCCCCCGCTGCCATCGGCCCGTTTGTTCCGATGATCAGCAACACTCCCAAACTGCTTGCTTTGGAGGAGCAGTACTCCGATTGTTGGCTTTGCTAGTGAGAGTATTGAGGGTTTTCAATCTATTTTGTTTCCATATTTTGCATTTCAAGTGTTTGATTTCTTTTTGTTAGTGTTGCCTTTCGAGGTTGGTGACATGCATGCTCTCATGTTTGTTCAACTTAGGTAG

mRNA sequence

ATGGAGTGGGTTAATTGGAGATTGTTATGGGGAGGAGGCTTTACCCTAATTCTTCTTGTAAGCTTTCATTTTCTCGCCGGCCAAACAGCGGTGGAAAAGCAACAGAAATTCGGACCATTCTCCTTCTCCTCCGCCGCCCCCGCTGCCATCGGCCCGTTTGTTCCGATGATCAGCAACACTCCCAAACTGCTTGCTTTGGAGGAGCAGTACTCCGATTTGTTGCCTTTCGAGGTTGGTGACATGCATGCTCTCATGTTTGTTCAACTTAGGTAG

Coding sequence (CDS)

ATGGAGTGGGTTAATTGGAGATTGTTATGGGGAGGAGGCTTTACCCTAATTCTTCTTGTAAGCTTTCATTTTCTCGCCGGCCAAACAGCGGTGGAAAAGCAACAGAAATTCGGACCATTCTCCTTCTCCTCCGCCGCCCCCGCTGCCATCGGCCCGTTTGTTCCGATGATCAGCAACACTCCCAAACTGCTTGCTTTGGAGGAGCAGTACTCCGATTTGTTGCCTTTCGAGGTTGGTGACATGCATGCTCTCATGTTTGTTCAACTTAGGTAG
Homology
[Close]
BLAST of CSPI04G10870 vs. TrEMBL
Match: A0A0A0KW99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G187300 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.5e-44
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MEWVNWRLLWGGGFTLILLVSFHFLAGQTAVEKQQKFGPFSFSSAAPAAIGPFVPMISNT 60
          MEWVNWRLLWGGGFTLILLVSFHFLAGQTAVEKQQKFGPFSFSSAAPAAIGPFVPMISNT
Sbjct: 1  MEWVNWRLLWGGGFTLILLVSFHFLAGQTAVEKQQKFGPFSFSSAAPAAIGPFVPMISNT 60

Query: 61 PKLLALEEQYSDLLPFEVGDMHALMFVQLR 91
          PKLLALEEQYSDLLPFEVGDMHALMFVQLR
Sbjct: 61 PKLLALEEQYSDLLPFEVGDMHALMFVQLR 90

[Close]
BLAST of CSPI04G10870 vs. NCBI nr
Match: gi|700198742|gb|KGN53900.1| (hypothetical protein Csa_4G187300 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 2.2e-44
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 1 

Query: 1  MEWVNWRLLWGGGFTLILLVSFHFLAGQTAVEKQQKFGPFSFSSAAPAAIGPFVPMISNT 60
          MEWVNWRLLWGGGFTLILLVSFHFLAGQTAVEKQQKFGPFSFSSAAPAAIGPFVPMISNT
Sbjct: 1  MEWVNWRLLWGGGFTLILLVSFHFLAGQTAVEKQQKFGPFSFSSAAPAAIGPFVPMISNT 60

Query: 61 PKLLALEEQYSDLLPFEVGDMHALMFVQLR 91
          PKLLALEEQYSDLLPFEVGDMHALMFVQLR
Sbjct: 61 PKLLALEEQYSDLLPFEVGDMHALMFVQLR 90

The following BLAST results are available for this feature:
BLAST of CSPI04G10870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI04G10870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KW99_CUCSA1.5e-44100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G187300 PE=4 SV=1[more]
BLAST of CSPI04G10870 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI04G10870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700198742|gb|KGN53900.1|2.2e-44100.00hypothetical protein Csa_4G187300 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI04G10870.1CSPI04G10870.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI04G10870Csa4G187300Cucumber (Chinese Long) v2cpicuB183
CSPI04G10870CsaV3_4G011940Cucumber (Chinese Long) v3cpicucB213
CSPI04G10870CsGy4G010460Cucumber (Gy14) v2cgybcpiB168
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI04G10870Wax gourdcpiwgoB412
CSPI04G10870Cucumber (Gy14) v1cgycpiB499
CSPI04G10870Melon (DHL92) v3.5.1cpimeB323
CSPI04G10870Watermelon (97103) v1cpiwmB344
CSPI04G10870Melon (DHL92) v3.6.1cpimedB314