CSPI04G08250 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G08250
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Homeobox leucine zipper protein
Location	Chr4 : 5987775 .. 5988862 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAAAAGGAGGTTTAGTGATGAACAAATTAAAACACTGGAGGCAATATATTATTTGACTGAATCGAAGTTGAATTCGAGGCAGGTGATCAAGCTAGCAACTAAGTTGGGACTGCAACCTCAACAGATTACTATATGGTTTCAGAACAAAAGAGCAAGATGGAAGTCCAAAGAGAAGCAGGAGAATTTCAAAAGCCTAAGAGCCAAGTGTGATGATCTAGCATCTCAGTTTGAAACGTTACAGGAAGAGAACAACTCCTTGCGCTCACAGGTACCAAAACTCTTCTTCATTTTCCTTTATTCGTCCTTATGTAGCCAAGCATTTTCATTAGTTGCAATAGGCATTTGAAACAGTTGCAGAAGCTAACCGTTCTTCAAGGACCTTGTGAGGGCACTATCATTCGAATGACATTGAAAAAAACAACTCATGAAACTCATGAAAAGCCAAAAAACTTACCAGATGCATTGGAACAGATGTATTCGAACAATAACTATAACACAAAATGTTTAGTGATTGGAGAAGGTGAACTTCAAATGACCCATTTGTTGGAAGGCAGAAGCGACCGCATTATGCCACATTGAGAAGCAACTTTTGAACCCAAATGGATCCTTTGAAACATCTGACACATGGTGCATTTTTTATGCCGATGGTGGTGTCTATGAATATCAGTCGTGTAGCAGTTTGCAGGGACAGAGTTTCTGGGGATAAAGAAAGATAAGATGGCCCATAATTTCATGACTTATTACTACCAGCTGAAAAATTGCCATTTAGACAACAGATATGAACAAAACTGAGGAACTGCCAACTGCTGCTAGCTGTTTTAGCAAGTACATTCCTTCCTTATCTTTGTGCAATTTACGAAAAGAAGAGACATTGGAACTGTATTACTTTGAAATGCATTAGTAGCATCCAAGAAGTAACGCAGACAGCTCAATCAATCGACCTTTTTAGGTGATGCACACACAATTGCTGAACTTCATTTCTTTTCTGGGGGGGCCTCTTGTTATGACTTCTGAGCAACATCTGTTAACTAAGATCAGTAGTTGATCAACAAGTTAAAAAAAAGTATATTTTATATGATCTTT

mRNA sequence

ATGAACAAAAGGAGGTTTAGTGATGAACAAATTAAAACACTGGAGGCAATATATTATTTGACTGAATCGAAGTTGAATTCGAGGCAGGTGATCAAGCTAGCAACTAAGTTGGGACTGCAACCTCAACAGATTACTATATGGTTTCAGAACAAAAGAGCAAGATGGAAGTCCAAAGAGAAGCAGGAGAATTTCAAAAGCCTAAGAGCCAAGTGTGATGATCTAGCATCTCAGTTTGAAACGTTACAGGAAGAGAACAACTCCTTGCGCTCACAGTTGCAGAAGCTAACCGTTCTTCAAGGACCTTGTGAGGGCACTATCATTCGAATGACATTGAAAAAAACAACTCATGAAACTCATGAAAAGCCAAAAAACTTACCAGATGCATTGGAACAGATGTATTCGAACAATAACTATAACACAAAATGTTTAGTGATTGGAGAAGGTGAACTTCAAATGACCCATTTGTTGGAAGGCAGAAGCGACCGCATTATGCCACATTGA

Coding sequence (CDS)

ATGAACAAAAGGAGGTTTAGTGATGAACAAATTAAAACACTGGAGGCAATATATTATTTGACTGAATCGAAGTTGAATTCGAGGCAGGTGATCAAGCTAGCAACTAAGTTGGGACTGCAACCTCAACAGATTACTATATGGTTTCAGAACAAAAGAGCAAGATGGAAGTCCAAAGAGAAGCAGGAGAATTTCAAAAGCCTAAGAGCCAAGTGTGATGATCTAGCATCTCAGTTTGAAACGTTACAGGAAGAGAACAACTCCTTGCGCTCACAGTTGCAGAAGCTAACCGTTCTTCAAGGACCTTGTGAGGGCACTATCATTCGAATGACATTGAAAAAAACAACTCATGAAACTCATGAAAAGCCAAAAAACTTACCAGATGCATTGGAACAGATGTATTCGAACAATAACTATAACACAAAATGTTTAGTGATTGGAGAAGGTGAACTTCAAATGACCCATTTGTTGGAAGGCAGAAGCGACCGCATTATGCCACATTGA

Homology

[Close]

BLAST of CSPI04G08250 vs. Swiss-Prot
Match: ATHB7_ARATH (Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=1 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 5.6e-22
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQIK+LE ++  +E++L  R+ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ +
Sbjct: 32  NQRRFSDEQIKSLEMMFE-SETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--------QGPCEGTIIRMTLKK 121
             +  LR   D+LASQFE+L++E  +L S+LQ+L           +  C G    + L  
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSS 151

Query: 122 TTHET------HEKPKNLPDALEQMYSNNNYNTKC 143
           T HE+        KP+ +   +E      ++   C
Sbjct: 152 THHESENEENRRRKPEEVRPEMEMKDDKGHHGVMC 185

[Close]

BLAST of CSPI04G08250 vs. Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-20
Identity = 57/147 (38.78%), Postives = 96/147 (65.31%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N++RFS+EQIK+LE I+  +E++L  R+ +++A +LGLQP+Q+ IWFQNKRARWK+K+ +
Sbjct: 30  NQKRFSEEQIKSLELIFE-SETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLE 89

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP--------CEGTIIRMTLK 121
           + + +LRA  ++LASQFE +++E  SL S+LQ+L   +Q P        C    + ++  
Sbjct: 90  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSSS 149

Query: 122 KTTHETHEKPKNLPDALEQMYSNNNYN 140
             +H    +P+   D    + ++ +YN
Sbjct: 150 TESHNGKSEPEGRLDQGSVLCNDGDYN 175

[Close]

BLAST of CSPI04G08250 vs. Swiss-Prot
Match: HOX6_ORYSJ (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.9e-19
Identity = 51/100 (51.00%), Postives = 75/100 (75.00%), Query Frame = 1


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           K+RFS+EQIK+LE+++  T++KL  RQ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ + 
Sbjct: 31  KKRFSEEQIKSLESMF-ATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 90

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP 102
            + +LR   D L   +E+L++E  +L  QL+KL  +LQ P
Sbjct: 91  EYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEP 129

[Close]

BLAST of CSPI04G08250 vs. Swiss-Prot
Match: HOX6_ORYSI (Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 9.9e-19
Identity = 51/100 (51.00%), Postives = 75/100 (75.00%), Query Frame = 1


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           K+RFS+EQIK+LE+++  T++KL  RQ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ + 
Sbjct: 31  KKRFSEEQIKSLESMF-ATQTKLEPRQKLQLARELGLQPRQVAIWFQNKRARWKSKQLER 90

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP 102
            + +LR   D L   +E+L++E  +L  QL+KL  +LQ P
Sbjct: 91  EYSALRDDYDALLCSYESLKKEKLALIKQLEKLAEMLQEP 129

[Close]

BLAST of CSPI04G08250 vs. Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 3.8e-18
Identity = 45/93 (48.39%), Postives = 72/93 (77.42%), Query Frame = 1


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           KRRF++EQI++LE++++   +KL  R+  +LA +LGLQP+Q+ IWFQNKRARW+SK+ + 
Sbjct: 74  KRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRSKQLEH 133

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKL 96
           ++ +LR+K D L S+ E+L++E  +L  QL +L
Sbjct: 134 DYAALRSKYDALHSRVESLKQEKLALTVQLHEL 166

[Close]

BLAST of CSPI04G08250 vs. TrEMBL
Match: A0A067JIR4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27169 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-22
Identity = 62/104 (59.62%), Postives = 81/104 (77.88%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQI+ LE+I+  +E+KL  R+ ++LA +LGLQP+Q+ IWFQN+RARWKSK+ +
Sbjct: 32  NKRRFSDEQIRLLESIFE-SETKLEPRKKLQLAGELGLQPRQVAIWFQNRRARWKSKQIE 91

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQG-PCEG 105
           + +K+LRA  D LAS FE+L+ E  SL  QLQKL  L G PCEG
Sbjct: 92  QEYKNLRANYDKLASCFESLKNEKQSLLIQLQKLNQLLGQPCEG 134

[Close]

BLAST of CSPI04G08250 vs. TrEMBL
Match: Q9XH73_PRUAR (Homeobox leucine zipper protein OS=Prunus armeniaca GN=HBLZP PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-21
Identity = 58/104 (55.77%), Postives = 83/104 (79.81%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQI+ LE+I+   +SKL  R+ +++A +LGLQP+Q+ IWFQN+RARWKSK+ +
Sbjct: 34  NQRRFSDEQIRLLESIFE-ADSKLEPRRKVQVARELGLQPRQVAIWFQNRRARWKSKQIE 93

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQG-PCEG 105
           ++F++LRA  D+LAS+FE+L+EE  SL  Q+QKL  L G P +G
Sbjct: 94  QDFRTLRADYDNLASRFESLKEEKQSLLMQMQKLNELVGKPSQG 136

[Close]

BLAST of CSPI04G08250 vs. TrEMBL
Match: I3S3I1_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.4e-21
Identity = 56/97 (57.73%), Postives = 78/97 (80.41%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQI++LE I+  +ESKL  R+ I+LA  LGLQP+Q+ IWFQN+RARWKSK  +
Sbjct: 38  NKRRFSDEQIRSLECIFE-SESKLEPRKKIQLAKDLGLQPRQVAIWFQNRRARWKSKRME 97

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL 99
           + ++ L+ + D+LAS+FE+L+EE  SL+ +LQKL+ L
Sbjct: 98  KEYRKLKDEYDNLASRFESLKEEKESLQLELQKLSYL 133

[Close]

BLAST of CSPI04G08250 vs. TrEMBL
Match: M5XDH8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011221mg PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.6e-21
Identity = 57/104 (54.81%), Postives = 82/104 (78.85%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQI  LE+I+   +SKL  R+ +++A +LGLQP+Q+ IWFQN+RARWKSK+ +
Sbjct: 34  NQRRFSDEQIGLLESIFE-ADSKLEPRRKVQVARELGLQPRQVAIWFQNRRARWKSKQIE 93

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQG-PCEG 105
           ++F++LRA  D+LAS+FE+L+EE  SL  Q+QKL  + G P +G
Sbjct: 94  QDFRTLRADYDNLASRFESLKEEKQSLLMQMQKLNEVVGKPSQG 136

[Close]

BLAST of CSPI04G08250 vs. TrEMBL
Match: A0A067JWT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14207 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.3e-20
Identity = 59/109 (54.13%), Postives = 81/109 (74.31%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQIK+LE ++  +ES+L  R+ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ +
Sbjct: 89  NKRRFSDEQIKSLETMFE-SESRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLE 148

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL------QGPCEG 105
            ++  LRA  ++LAS+FETL++E  +L  QLQKL  L      +G C G
Sbjct: 149 RDYSVLRANYNNLASRFETLKKEKQALAIQLQKLNELIEKPREEGECCG 196

[Close]

BLAST of CSPI04G08250 vs. TAIR10
Match: AT2G46680.1 (AT2G46680.1 homeobox 7)

HSP 1 Score: 105.5 bits (262), Expect = 3.2e-23
Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQIK+LE ++  +E++L  R+ ++LA +LGLQP+Q+ IWFQNKRARWKSK+ +
Sbjct: 32  NQRRFSDEQIKSLEMMFE-SETRLEPRKKVQLARELGLQPRQVAIWFQNKRARWKSKQLE 91

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL--------QGPCEGTIIRMTLKK 121
             +  LR   D+LASQFE+L++E  +L S+LQ+L           +  C G    + L  
Sbjct: 92  TEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEEERQCSGDQAVVALSS 151

Query: 122 TTHET------HEKPKNLPDALEQMYSNNNYNTKC 143
           T HE+        KP+ +   +E      ++   C
Sbjct: 152 THHESENEENRRRKPEEVRPEMEMKDDKGHHGVMC 185

[Close]

BLAST of CSPI04G08250 vs. TAIR10
Match: AT3G61890.1 (AT3G61890.1 homeobox 12)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 57/147 (38.78%), Postives = 96/147 (65.31%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N++RFS+EQIK+LE I+  +E++L  R+ +++A +LGLQP+Q+ IWFQNKRARWK+K+ +
Sbjct: 30  NQKRFSEEQIKSLELIFE-SETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLE 89

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGP--------CEGTIIRMTLK 121
           + + +LRA  ++LASQFE +++E  SL S+LQ+L   +Q P        C    + ++  
Sbjct: 90  KEYNTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQRPKEEKHHECCGDQGLALSSS 149

Query: 122 KTTHETHEKPKNLPDALEQMYSNNNYN 140
             +H    +P+   D    + ++ +YN
Sbjct: 150 TESHNGKSEPEGRLDQGSVLCNDGDYN 175

[Close]

BLAST of CSPI04G08250 vs. TAIR10
Match: AT2G22430.1 (AT2G22430.1 homeobox protein 6)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-16
Identity = 44/99 (44.44%), Postives = 68/99 (68.69%), Query Frame = 1


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           KRR S  Q+K LE  + L E+KL   + +KLA +LGLQP+Q+ +WFQN+RARWK+K+ ++
Sbjct: 63  KRRLSINQVKALEKNFEL-ENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 122

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKL-TVLQG 101
           ++  L+ + D L   F++L+ +N SL  ++ KL T L G
Sbjct: 123 DYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNG 160

[Close]

BLAST of CSPI04G08250 vs. TAIR10
Match: AT3G01470.1 (AT3G01470.1 homeobox 1)

HSP 1 Score: 81.3 bits (199), Expect = 6.4e-16
Identity = 44/102 (43.14%), Postives = 69/102 (67.65%), Query Frame = 1


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           KRR + EQ+  LE  +  TE+KL   +  +LA KLGLQP+Q+ +WFQN+RARWK+K+ + 
Sbjct: 69  KRRLTTEQVHLLEKSFE-TENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLER 128

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKLT-VLQGPCE 104
           ++  L++  D L S ++++  +N+ LRS++  LT  LQG  E
Sbjct: 129 DYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKLQGKQE 169

[Close]

BLAST of CSPI04G08250 vs. TAIR10
Match: AT4G40060.1 (AT4G40060.1 homeobox protein 16)

HSP 1 Score: 79.7 bits (195), Expect = 1.9e-15
Identity = 39/93 (41.94%), Postives = 65/93 (69.89%), Query Frame = 1


Query: 3   KRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQE 62
           KRR   +Q+K LE  + L E+KL   +  KLA +LGLQP+Q+ +WFQN+RARWK+K+ ++
Sbjct: 60  KRRLKVDQVKALEKNFEL-ENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEK 119

Query: 63  NFKSLRAKCDDLASQFETLQEENNSLRSQLQKL 96
           ++  L+ + D L   F++L+ +N+SL  ++ K+
Sbjct: 120 DYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKI 151

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: gi|449439053|ref|XP_004137302.1| (PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 6.3e-82
Identity = 158/163 (96.93%), Postives = 159/163 (97.55%), Query Frame = 1


Query: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60
           MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK
Sbjct: 1   MNKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEK 60

Query: 61  QENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQGPCEGTIIRMTLKKTTHETHE 120
           QENFKSLRAKCDDLASQFETLQEENNSL SQLQKLTVLQGPCEG IIRMTLKKTTHETHE
Sbjct: 61  QENFKSLRAKCDDLASQFETLQEENNSLLSQLQKLTVLQGPCEGAIIRMTLKKTTHETHE 120

Query: 121 KPKNLPDALEQMYSNNNYNTKCLVIGEGELQMTHLLEGRSDRI 164
           KPK LP ALEQMYSN+NYNTKCLVIGEGELQMTHLLEGRSDRI
Sbjct: 121 KPKTLPHALEQMYSNDNYNTKCLVIGEGELQMTHLLEGRSDRI 163

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: gi|802753998|ref|XP_012088620.1| (PREDICTED: homeobox-leucine zipper protein ATHB-12-like [Jatropha curcas])

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 62/104 (59.62%), Postives = 81/104 (77.88%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQI+ LE+I+  +E+KL  R+ ++LA +LGLQP+Q+ IWFQN+RARWKSK+ +
Sbjct: 32  NKRRFSDEQIRLLESIFE-SETKLEPRKKLQLAGELGLQPRQVAIWFQNRRARWKSKQIE 91

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQG-PCEG 105
           + +K+LRA  D LAS FE+L+ E  SL  QLQKL  L G PCEG
Sbjct: 92  QEYKNLRANYDKLASCFESLKNEKQSLLIQLQKLNQLLGQPCEG 134

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: gi|5031277|gb|AAD38144.1|AF139497_1 (homeobox leucine zipper protein [Prunus armeniaca])

HSP 1 Score: 110.9 bits (276), Expect = 2.1e-21
Identity = 58/104 (55.77%), Postives = 83/104 (79.81%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           N+RRFSDEQI+ LE+I+   +SKL  R+ +++A +LGLQP+Q+ IWFQN+RARWKSK+ +
Sbjct: 34  NQRRFSDEQIRLLESIFE-ADSKLEPRRKVQVARELGLQPRQVAIWFQNRRARWKSKQIE 93

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQG-PCEG 105
           ++F++LRA  D+LAS+FE+L+EE  SL  Q+QKL  L G P +G
Sbjct: 94  QDFRTLRADYDNLASRFESLKEEKQSLLMQMQKLNELVGKPSQG 136

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: gi|502136527|ref|XP_004502719.1| (PREDICTED: homeobox-leucine zipper protein ATHB-12-like [Cicer arietinum])

HSP 1 Score: 110.2 bits (274), Expect = 3.6e-21
Identity = 55/101 (54.46%), Postives = 80/101 (79.21%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQI++LE I+  +ESKL  R+ ++LA  LGLQP+Q+ IWFQN+RARWKSK  +
Sbjct: 44  NKRRFSDEQIRSLECIFE-SESKLEPRKKMQLARDLGLQPRQVAIWFQNRRARWKSKRIE 103

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVLQGPC 103
           + ++ L+ + D+LAS+F++L+EE  SL+S+LQKL+ +   C
Sbjct: 104 QEYRKLKDEYDNLASKFQSLKEEKESLQSELQKLSYMMETC 143

[Close]

BLAST of CSPI04G08250 vs. NCBI nr
Match: gi|388493514|gb|AFK34823.1| (unknown [Lotus japonicus])

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-20
Identity = 56/97 (57.73%), Postives = 78/97 (80.41%), Query Frame = 1


Query: 2   NKRRFSDEQIKTLEAIYYLTESKLNSRQVIKLATKLGLQPQQITIWFQNKRARWKSKEKQ 61
           NKRRFSDEQI++LE I+  +ESKL  R+ I+LA  LGLQP+Q+ IWFQN+RARWKSK  +
Sbjct: 38  NKRRFSDEQIRSLECIFE-SESKLEPRKKIQLAKDLGLQPRQVAIWFQNRRARWKSKRME 97

Query: 62  ENFKSLRAKCDDLASQFETLQEENNSLRSQLQKLTVL 99
           + ++ L+ + D+LAS+FE+L+EE  SL+ +LQKL+ L
Sbjct: 98  KEYRKLKDEYDNLASRFESLKEEKESLQLELQKLSYL 133

The following BLAST results are available for this feature:

BLAST of CSPI04G08250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATHB7_ARATH	5.6e-22	40.00	Homeobox-leucine zipper protein ATHB-7 OS=Arabidopsis thaliana GN=ATHB-7 PE=1 SV...	[more]
ATB12_ARATH	2.4e-20	38.78	Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=1 ...	[more]
HOX6_ORYSJ	9.9e-19	51.00	Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. japonica GN=HOX6 PE=...	[more]
HOX6_ORYSI	9.9e-19	51.00	Homeobox-leucine zipper protein HOX6 OS=Oryza sativa subsp. indica GN=HOX6 PE=2 ...	[more]
HOX22_ORYSI	3.8e-18	48.39	Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=...	[more]

BLAST of CSPI04G08250 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067JIR4_JATCU	1.3e-22	59.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_27169 PE=4 SV=1	[more]
Q9XH73_PRUAR	1.5e-21	55.77	Homeobox leucine zipper protein OS=Prunus armeniaca GN=HBLZP PE=2 SV=1	[more]
I3S3I1_LOTJA	7.4e-21	57.73	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
M5XDH8_PRUPE	9.6e-21	54.81	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011221mg PE=4 SV=1	[more]
A0A067JWT5_JATCU	1.3e-20	54.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14207 PE=4 SV=1	[more]

BLAST of CSPI04G08250 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46680.1	3.2e-23	40.00	homeobox 7	[more]
AT3G61890.1	1.3e-21	38.78	homeobox 12	[more]
AT2G22430.1	2.2e-16	44.44	homeobox protein 6	[more]
AT3G01470.1	6.4e-16	43.14	homeobox 1	[more]
AT4G40060.1	1.9e-15	41.94	homeobox protein 16	[more]

BLAST of CSPI04G08250 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439053\|ref\|XP_004137302.1\|	6.3e-82	96.93	PREDICTED: homeobox-leucine zipper protein ATHB-7-like [Cucumis sativus]	[more]
gi\|802753998\|ref\|XP_012088620.1\|	1.9e-22	59.62	PREDICTED: homeobox-leucine zipper protein ATHB-12-like [Jatropha curcas]	[more]
gi\|5031277\|gb\|AAD38144.1\|AF139497_1	2.1e-21	55.77	homeobox leucine zipper protein [Prunus armeniaca]	[more]
gi\|502136527\|ref\|XP_004502719.1\|	3.6e-21	54.46	PREDICTED: homeobox-leucine zipper protein ATHB-12-like [Cicer arietinum]	[more]
gi\|388493514\|gb\|AFK34823.1\|	1.1e-20	57.73	unknown [Lotus japonicus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001356	Homeobox_dom
IPR003106	Leu_zip_homeo
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G08250.1	CSPI04G08250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 3..56 score: 8.8
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 1..62 score: 4.6
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 1..58 score: 15
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 64..96 score: 5.
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 6..55 score: 4.2
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 3..60 score: 7.27
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 33..56 scor
None	No IPR available	unknown	Coil	Coil	coord: 57..98 scor
None	No IPR available	GENE3D	G3DSA:1.20.5.170		coord: 56..96 score: 1.
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 2..96 score: 2.4
None	No IPR available	PANTHER	PTHR24326:SF122	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-12-RELATED	coord: 2..96 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G08250	Cla002419	Watermelon (97103) v1	cpiwmB317
CSPI04G08250	MELO3C016081	Melon (DHL92) v3.5.1	cpimeB312
CSPI04G08250	ClCG07G009850	Watermelon (Charleston Gray)	cpiwcgB341
CSPI04G08250	Lsi07G003120	Bottle gourd (USVL1VR-Ls)	cpilsiB305
CSPI04G08250	MELO3C032548.2	Melon (DHL92) v3.6.1	cpimedB303
CSPI04G08250	CsaV3_4G008480	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G08250	Bhi01G002526	Wax gourd	cpiwgoB367
CSPI04G08250	Cucsa.273360	Cucumber (Gy14) v1	cgycpiB411
CSPI04G08250	CmaCh18G013380	Cucurbita maxima (Rimu)	cmacpiB418
CSPI04G08250	CmaCh16G000240	Cucurbita maxima (Rimu)	cmacpiB344
CSPI04G08250	CmoCh18G013710	Cucurbita moschata (Rifu)	cmocpiB406
CSPI04G08250	CmoCh16G000280	Cucurbita moschata (Rifu)	cmocpiB335
CSPI04G08250	Carg15041	Silver-seed gourd	carcpiB1028

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G08250	Watermelon (97103) v2	cpiwmbB331
CSPI04G08250	Wax gourd	cpiwgoB382
CSPI04G08250	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G08250	Cucumber (Gy14) v2	cgybcpiB168