CSPI04G06940 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI04G06940
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Glycine-rich protein A3
Location	Chr4 : 4868360 .. 4870710 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATTTATCTATATATATATATATATATATATATAACGATTTCTTCAAGAATTCAAGTCTCCTCCTCTCTATCTTCATATTCCAACAACCAAATCCTCCATTTCATCGGTAAATTCTCTCTCTCTTTTTCTCCTTTACGCGTTTTCTTTGTTTTGGAATTTTATTTTGATCTGCGTAGTACCCACAAATCGGAACTCCAAATATGTTACAATACCAGATTATTGCTTTGCTTTCCTTTTTTATTTCTGAATCTGGAATTTCTGATTATAGATTAATCTTTTTGTTGAAATACGCTGGAATTCATTTTTTTTTAATTAGTGTTATTTGTTGATTTCAAATTATTTTTTGTATGTGTCTTACGTTTCGGGAGATCGTGAATCTACAATTGGTGATCGATTTCGTGTTCTTTATGATTTGTGATCGGTTGTGATTGCGTTTATGGTTGTATCATTTTCTGTCGTGTGTTAATTTCTTTTAGGAAGTGGTATATTATGTAGAGAAGAACGGAGAGGGCAGGTTCAACTATTGATGTTTGAGTTTTTCTCTAATTTGTTCTATTTGAAGTTTCATAATTGAAAGATTACATCTGTAAAAGTTGGAATGCAAATTTCGCTCCTTCTTATAAGTGTTGGGACATGATCATAACATATTATCTACACTACCGAGCTTAGATCTCTTTGGTTTATCAATATAGAAGTTGCATTTTACTCGCACATTGAAGATATTTTTTGTTCATTCTATGTTAGGCATGTTCACATCGTTAACAAGTTTTGTTAAATGTGATCAATCCTTTTTGTCTCGATCTTTCTGGAAAAGAAAAAAGACACTATGGAGATCATTTTAGAGGCTGTCGAGTCATTGGCGTGAAGTCTATTTTTTAAATGTCTTATAAGTTCCAACAAATTAGCGCATCTCGTTGATTGAGAAGCAATCAATTTCTCTTTTCCCCTGGAAGCTGTTTTTGGAATTGTAATTATCTTGAATGGTTCTCCTCTGTGCTAAATGAGGAGTGTTGTGTTCCTAACTTCTCTGGTTTGAGTGAAGTTTGTTTGTCAATTTTCAGTTGTTATTAGAAGCTGATAAATCATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGTATTGATCCAATTTTACATACATCACTGGGAAGTGTATTATTATTATTATTATTATTATTAGATGGTTTGTTTAGTTAAGTTGTTAATTTTAGTTAATTACTTCAATTACTTTGTCAATTAGAATGCAGGAATTAATAATAATTTAGATAATTTTGTTAGACCATCTATAACCCAGGCACTTTTAGGTTGTAATAAGGCTTTTGAAACATTTCATTTTAGAAATTTTGATGTTATCTCCATTGTTCTTGTGATGGATTTTTGCTCCCTACTATGGCTTTTTAAAAACAATCTCATACAAGTACAAAGTTGTCACATAAGGGATTCAATTGATGGTTTTGATAGAAGATCTTTTTACAAAGTTGCTGATTCCAAATCTTTTTAAATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTGATTTTCCAGCCATCTCTTTTCACCGAGCCTTCTTCTTCGTCGGTCGATTTCAAGAATGGTGTCGGTGCAGATAGCGAGCGGCGTTACCATCTTCTTCTCTAATTTCTATAATGTCTTTTAAGACTCTGGATTTCGTATCTACTCTTATTGTCTCGACCACCTTTCTAATGGTTTGTGTACTCTTTTACTCTTTGGACGTCAATAATCTGGATCCATCTTTCCAGTTTTCACCTTATTTTTCTTCCTATTGTAAATTCTTTTGGTTTAACCTATAATTTAAAATGATGAAGATTGTATTATTTGTTTTTTCATTGCTTAAATTATAGGAAGCAATGCTAATATCAATTTTGTGTC

mRNA sequence

ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTGA

Coding sequence (CDS)

ATGGGGGGTGGAAAAGATAAACATGATGAATCTGACAAAGGTTTATTCTCCCATCTGGCTCATGGTGTTGCCCATGGAGCTGGATATCCTTCCCATGGATACCCACCTCCTGGCGGGTATCCACCTCCTGGAGGGTATCCACCTCCTGGAGGGTATCCCCCACCCGGAGGATATCCTCCATCTCATGGCTATCCACCCCAAGGATATCCCCCAGCTGGCTACCCTCCAGGCGCTCATCCTCCTGGTGCTTATCCTGGACCCTCTGCTCCACACCATTCAGGGCACGGTGTAGCAGGAATGCTCGCCGGAGGTGCTGCAGCTGCAGCAGCGGCATATGGAGCTCATCACGTGGCCCATAGCGCTGGTCATCATTACCCCCATGGTGTTGCTCATTATGGTCATGGTCACGGTCACGGTGGAAAATTCAAGCACCATGGGAAGTTCAAGCACGGAAAGTTTGGGAAACACAAACATGGGAAACACGGGATGTTTGGCGGAGGAAAATTCAAGAAGTGGAAGTGA

Homology

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BLAST of CSPI04G06940 vs. Swiss-Prot
Match: GRP3_DAUCA (Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.7e-24
Identity = 89/145 (61.38%), Postives = 99/145 (68.28%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGG D H++ DKGLFS+LA G+A G  YP   YPP  G  PP GYPP GG  PP GYPP
Sbjct: 1   MGGG-DGHNDQDKGLFSNLAGGLAGGGHYPPGQYPPAAGGYPPQGYPPAGGGYPPQGYPP 60

Query: 61  S-HGYPPQGYPPA--GYPPGAHPP-GAYPGPSAPHHSGH-GVAGMLAGGAAAAAAAYGAH 120
           +  GYPPQGYPPA  GYPP  +PP G + G SAPHHSGH GVAGM+AGG AAAAAAYG H
Sbjct: 61  AGGGYPPQGYPPAGGGYPPQGYPPAGHHSGSSAPHHSGHGGVAGMVAGGRAAAAAAYGVH 120

Query: 121 HVAHSAGHHYPHGVAHYGHGHGHGG 141
           H+    G H  HG    G+ HG  G
Sbjct: 121 HMTQGHGSHGGHG----GYAHGAMG 140

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BLAST of CSPI04G06940 vs. Swiss-Prot
Match: ANXA7_DICDI (Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.5e-06
Identity = 43/76 (56.58%), Postives = 45/76 (59.21%), Query Frame = 1


Query: 28  GYP-SHGYPPPGGYPPPGGYPPPGGYPPPGGYPPSHGYPPQGYPP-AGYPPGAHPPGA-- 87
           GYP   GYPP  GYPP  GYPP  GYPP  GYPP  GYPPQGYPP  GYPP   P G   
Sbjct: 81  GYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQGYPPQQGYPPVGVPVGVPV 140

Query: 88  --YPGPSAPHHSGHGV 98
              PG    +H G+ V
Sbjct: 141 GFAPGMVVGYHQGYFV 156

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BLAST of CSPI04G06940 vs. TrEMBL
Match: A0A0A0KV55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056610 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 9.2e-91
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60

Query: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120
           SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS
Sbjct: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120

Query: 121 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 174
           AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Sbjct: 121 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173

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BLAST of CSPI04G06940 vs. TrEMBL
Match: F6HJ21_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00780 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 5.0e-44
Identity = 136/191 (71.20%), Postives = 141/191 (73.82%), Query Frame = 1


Query: 1   MGGGKDKH-DESDKGLFSHLAHGVA-HGAG-YPSHGYPPPG------GYPPPGG--YPPP 60
           MGGGKD H DESDKGLFS LAH  A H +G YP  GYPP G      GYPP GG  YPP 
Sbjct: 1   MGGGKDTHHDESDKGLFSQLAHAAAGHSSGQYPPQGYPPQGYPQHGGGYPPHGGGGYPPH 60

Query: 61  G--GYPPPGGYPPSHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAG-MLAGGAA 120
           G  GYPP GGYPP  GYPPQGYP AGYPPG++PP AYPGPSAP HSGHG  G MLAGGAA
Sbjct: 61  GGGGYPPQGGYPPQGGYPPQGYPQAGYPPGSYPPAAYPGPSAP-HSGHGGMGTMLAGGAA 120

Query: 121 AAAAAYGAHHVAHSAGHHYPHGVAH--YGHGHGHGGKFKHH-GKFKHGKFGKH-KHGKHG 174
           AAAAAYGAH + H  G H  H V H  YG  HGH GKFKHH GKFKHGK GK  KHG+HG
Sbjct: 121 AAAAAYGAHQLGH--GGHGGHNVGHGFYGGSHGH-GKFKHHGGKFKHGKHGKFGKHGQHG 180

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BLAST of CSPI04G06940 vs. TrEMBL
Match: A0A067KH25_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15382 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.3e-43
Identity = 123/177 (69.49%), Postives = 132/177 (74.58%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGGKDKHDE DKGLF H   G +HG G P +   PPG YPP  G  PP GYPP  GYPP
Sbjct: 1   MGGGKDKHDEHDKGLFGH---GHSHGHGVPGY---PPGQYPPQPGQYPPQGYPPQQGYPP 60

Query: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHG-VAGMLAGGAAAAAAAYGAHHVAH 120
           + GYPP  YPPAGYPPGA+PP  YPGPSA HHSGHG +  MLAGGAAAAAAAYGAHH++H
Sbjct: 61  A-GYPPGAYPPAGYPPGAYPPAGYPGPSAQHHSGHGGIGAMLAGGAAAAAAAYGAHHLSH 120

Query: 121 -SAGHHYPHGVAHYGHGHGHGGKFKHH-GKFK-HGKFGKHKHGKHGMFGGGKFKKWK 174
            S G+H+    AH G    HGGKFKHH GKFK HGKF   KHGKHGMFGGGKFKKWK
Sbjct: 121 GSHGNHHGIPGAHLGGYGSHGGKFKHHGGKFKHHGKFKHGKHGKHGMFGGGKFKKWK 170

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BLAST of CSPI04G06940 vs. TrEMBL
Match: V7CDY8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G278700g PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 131/208 (62.98%), Postives = 135/208 (64.90%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPS-------------HGYPPPGGYPPPGGYP 60
           MGGGKD HDESDKGLFSHLAHG   G GYP               GYPP GGYPP GGYP
Sbjct: 1   MGGGKDTHDESDKGLFSHLAHGAHGGHGYPPGAYPPQPGAYPPHQGYPPAGGYPPAGGYP 60

Query: 61  PPGGYPPPGGYPPSHGYPPQ-GYPPA-GYPPGAHPPGAYPGPS-APHHSGH------GVA 120
           P GGYPP GGYPP+ GYPP  GYPPA GYPP  +PP  YP  S AP H GH      G+ 
Sbjct: 61  PAGGYPPAGGYPPAGGYPPAGGYPPAGGYPPAGYPPAGYPASSHAPGHHGHQGHGHGGMG 120

Query: 121 GMLAGGAAAAAAAYGAHHVAH-------SAGHHYPHGVAHYGH-GHGHGGKFKHH---GK 174
            MLAGGAAAA  AYGAHH+A        S G H  HG AH GH GHGH GKFK H   GK
Sbjct: 121 AMLAGGAAAAGVAYGAHHIAQGSHGSHGSHGAHMAHGYAHGGHMGHGH-GKFKQHGHGGK 180

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BLAST of CSPI04G06940 vs. TrEMBL
Match: A0A0L9URY1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g066300 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.7e-42
Identity = 127/194 (65.46%), Postives = 136/194 (70.10%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGA-GYPSHGYPPPGGYPPPGGYPPPGGYPP----- 60
           MGGGKDKHDE DKGLFS+LA+GVAH A GYPS GYPPPG YPPP GYP   GYPP     
Sbjct: 1   MGGGKDKHDEEDKGLFSNLAYGVAHSAHGYPSGGYPPPGAYPPPQGYPSGHGYPPQQGGY 60

Query: 61  -PGGYPPSHGYPPQGYPPAG-YPPGAHPPG-AYPGPSAPH------------HSGHGVAG 120
            P GYPP+ GYPP GYPPAG YPP  +PP   YP PSAPH            HSG G   
Sbjct: 61  PPAGYPPA-GYPPAGYPPAGGYPPAGYPPQHGYPAPSAPHGYPAPHGSHGSGHSGVGTGA 120

Query: 121 MLAGGAAAAAAAYGAHHVAHSAGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHG 174
           +LAGGAAAAAAAYGAHH++H  GHH   G  H G+GH   GKFK+HGKFKHGKFGKH   
Sbjct: 121 LLAGGAAAAAAAYGAHHLSH--GHHGYGG--HGGYGHMPHGKFKNHGKFKHGKFGKHGKF 180

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BLAST of CSPI04G06940 vs. TAIR10
Match: AT4G19200.1 (AT4G19200.1 proline-rich family protein)

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-34
Identity = 116/192 (60.42%), Postives = 125/192 (65.10%), Query Frame = 1


Query: 1   MGGGKDKH-DESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYP 60
           MGGGKDKH DE +KG      HG   G  YP    P  GGYPP G YPP  GYPP GGYP
Sbjct: 1   MGGGKDKHHDEQEKGF-----HGFPGGGHYP----PAQGGYPPQG-YPPQQGYPPAGGYP 60

Query: 61  PSHGYPPQGYP--PAGYPP--GAHPPGAYPGPSAPH--HSGHGVAGMLAGGAAAAAAAYG 120
           P+ GYPP  YP  P GYPP  G +PP  YP P A H  HSG G+ GM+AG A AAAAAYG
Sbjct: 61  PA-GYPPGAYPAAPGGYPPAPGGYPPAGYPAPGAHHSGHSGGGLGGMIAGAAGAAAAAYG 120

Query: 121 AHHVAHSAGHHYPHGVAHYGHGH------GHG--GKF---KHHGKFKHGKFGKHKHGKHG 174
           AHHV H++ + Y H V H G+GH      GHG  GKF   KH GKFKHGK G  KHGKHG
Sbjct: 121 AHHVGHASHNPYGHAVGHGGYGHAPAHGFGHGGHGKFKHGKHGGKFKHGKHG--KHGKHG 179

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BLAST of CSPI04G06940 vs. TAIR10
Match: AT5G45350.1 (AT5G45350.1 proline-rich family protein)

HSP 1 Score: 141.0 bits (354), Expect = 7.1e-34
Identity = 111/189 (58.73%), Postives = 121/189 (64.02%), Query Frame = 1


Query: 4   GKDKHDESDKGLFSHLAHGVAHG-----AGYPSHGYPPPGGYPPPGGYPPPGGYPP-PGG 63
           G D  ++ DKG   +   G         AGYP  GYPPP G  PP GY PPG YPP PGG
Sbjct: 2   GGDNDNDKDKGFHGYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGY-PPGAYPPAPGG 61

Query: 64  YPPSHGYPPQGYPPA----GYPP----GAHPPGAYPGPSAPHHSGH--GVAGMLAGGAAA 123
           YPP+ GY   GYPPA    GYPP    G +PP  YP     HHSGH  G+ GM+AG    
Sbjct: 62  YPPAPGY--GGYPPAPGYGGYPPAPGHGGYPPAGYPA----HHSGHAGGIGGMIAG---- 121

Query: 124 AAAAYGAHHVAHSAGHHYPHGVAHYGH--GHGHGGKFKH-HGKFKHGKFGKHKHGKHGMF 174
           AAAAYGAHHVAHS+  H P+G A YGH  GHGHG  + H HGKFKHGK GK KHGKHGMF
Sbjct: 122 AAAAYGAHHVAHSS--HGPYGHAAYGHGFGHGHGYGYGHGHGKFKHGKHGKFKHGKHGMF 177

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BLAST of CSPI04G06940 vs. TAIR10
Match: AT1G31750.1 (AT1G31750.1 proline-rich family protein)

HSP 1 Score: 118.2 bits (295), Expect = 4.9e-27
Identity = 97/175 (55.43%), Postives = 105/175 (60.00%), Query Frame = 1


Query: 4   GKDKHDESDKGLFSHLAHGVAHGAGYPSHGY--PPPGGYPPPGGYPPPGGYPPPGGYPPS 63
           GKD H E DK  FSH  H   HG GYP   Y  PP G YPPPGGYPP  GYP     PP 
Sbjct: 2   GKDDHHEQDKRFFSHHNH---HGHGYPPGAYPPPPQGAYPPPGGYPPQ-GYP-----PPP 61

Query: 64  HGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHS-GHGVAGMLAGGAAAAAAAYGAHHVAHS 123
           HGYPP  YPP   PPGA+PP  YPGPS P    G GV G++AG A AAAAA G HH    
Sbjct: 62  HGYPPAAYPP---PPGAYPPAGYPGPSGPRPGFGGGVGGLIAGAATAAAAAMGGHH---- 121

Query: 124 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKF--GKHKHGKHGMFGGGKFKKWK 174
           AGHH          G+GH G    HGK+K G F  GK+K GKH MFGGGK+K+ K
Sbjct: 122 AGHH---------GGYGHHG----HGKYKRGFFGGGKYKRGKHSMFGGGKYKRGK 147

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BLAST of CSPI04G06940 vs. TAIR10
Match: AT5G17650.1 (AT5G17650.1 glycine/proline-rich protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 100/187 (53.48%), Postives = 115/187 (61.50%), Query Frame = 1


Query: 4   GKDKHDESDKGLFSHLAHGVA------HGAGYPSHG--------YPPPGGYPPPGGYPPP 63
           G D+H+ SD+G F +LA G A      HG GY  HG        YPPP   PPP GYPP 
Sbjct: 2   GNDQHNHSDRGFFHNLA-GFAGGQYPPHGHGYGHHGHGYGSSYPYPPP---PPPHGYPPV 61

Query: 64  GGYPPPGGYPPSHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAA 123
             YPP GGYPP+ GYPP GYPPAGYP   +P   YP PS   H   G+  ++AGG AAAA
Sbjct: 62  A-YPPHGGYPPA-GYPPAGYPPAGYPAHGYPSHGYPRPSHSGHHHGGIGAIIAGGVAAAA 121

Query: 124 AAYGAHHVAHSAGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFG---G 174
              GAHH++H  G HY H   H+GHG+G+G  +  HGKFKHGKF   K GKHGMFG   G
Sbjct: 122 ---GAHHMSHHHG-HYGH---HHGHGYGYG--YHGHGKFKHGKFKHGKFGKHGMFGKHKG 173

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BLAST of CSPI04G06940 vs. TAIR10
Match: AT5G41390.1 (AT5G41390.1 PLAC8 family protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 38/57 (66.67%), Postives = 39/57 (68.42%), Query Frame = 1


Query: 22  GVAHGAGYPSHGYPPPG-GYPPPGGYPPPG-GYPPPGGYPPSHGYPPQGYPPA-GYP 76
           G     GYP H YP PG GYPP  GYPPPG GYPP  GYPP+ GY P GYPPA GYP
Sbjct: 207 GYPPATGYPQHYYPQPGHGYPPAPGYPPPGHGYPPAPGYPPAPGY-PSGYPPAPGYP 262

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BLAST of CSPI04G06940 vs. NCBI nr
Match: gi|778691231|ref|XP_004150942.2| (PREDICTED: glycine-rich protein A3 [Cucumis sativus])

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-90
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60

Query: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120
           SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS
Sbjct: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120

Query: 121 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 174
           AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Sbjct: 121 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 173

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BLAST of CSPI04G06940 vs. NCBI nr
Match: gi|659101947|ref|XP_008451874.1| (PREDICTED: glycine-rich protein A3-like [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 4.7e-80
Identity = 163/173 (94.22%), Postives = 164/173 (94.80%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPPPGGYPP 60
           MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPP      
Sbjct: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSHGYPPPGGYPPPGGYPPPGGYPP------ 60

Query: 61  SHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120
           SHGYPPQGYPPAGYPPGA+PPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS
Sbjct: 61  SHGYPPQGYPPAGYPPGAYPPGAYPGPSAPHHSGHGVAGMLAGGAAAAAAAYGAHHVAHS 120

Query: 121 AGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 174
           AGH YPHGVAHY  GHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK
Sbjct: 121 AGH-YPHGVAHY--GHGHGGKFKHHGKFKHGKFGKHKHGKHGMFGGGKFKKWK 164

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BLAST of CSPI04G06940 vs. NCBI nr
Match: gi|672180629|ref|XP_008810512.1| (PREDICTED: glycine-rich protein A3-like [Phoenix dactylifera])

HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45
Identity = 133/195 (68.21%), Postives = 143/195 (73.33%), Query Frame = 1


Query: 1   MGGGKDKHD---ESDKGLFSHLAHGV---AHGAGYP-SHGYPPPGGYPP-PGGYPP---- 60
           MGGGKDKHD    SD+G  S +AHG+    H +GYP + G  PP GYPP PGGYPP    
Sbjct: 1   MGGGKDKHDGKDSSDRGFLSDMAHGLYPSGHHSGYPPAPGAYPPQGYPPAPGGYPPQGYP 60

Query: 61  --PGGYPP------PGGYPPSHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHG--VA 120
             PGGYPP      PGGYPP  GYPPQGYPP GY PG +PP AYPGPSAP H GHG  + 
Sbjct: 61  SAPGGYPPQGYPSAPGGYPPQ-GYPPQGYPPHGYAPGGYPPAAYPGPSAP-HQGHGSHMG 120

Query: 121 GMLAGGAAAAAAAYGAHHVAHSAGHHYPHGVAHYGHGHGHGGKFKHHGKFKHGKFGKHKH 174
            MLAGGAAAAAAAYGAHH+AH + H   HG A+YGH  GH GKFKHHGKFKHGKFGKHKH
Sbjct: 121 TMLAGGAAAAAAAYGAHHIAHGSHHGATHG-AYYGHMPGHHGKFKHHGKFKHGKFGKHKH 180

[Close]

BLAST of CSPI04G06940 vs. NCBI nr
Match: gi|695055819|ref|XP_009416107.1| (PREDICTED: glycine-rich protein A3-like [Musa acuminata subsp. malaccensis])

HSP 1 Score: 186.4 bits (472), Expect = 4.2e-44
Identity = 131/199 (65.83%), Postives = 139/199 (69.85%), Query Frame = 1


Query: 1   MGGGKDKHDESDKGLFSHLAHGVAHGAGYPSH-GYPP-PGGYPPPGGYPPPGGYPPPGGY 60
           MGGGKDKHDESDKGLFS+LAHG+   AG+  H GYPP PG YPPPG YPP G  P PG Y
Sbjct: 1   MGGGKDKHDESDKGLFSNLAHGL---AGHGQHGGYPPYPGAYPPPGAYPPQGYPPAPGAY 60

Query: 61  P----PSHGYPPQGYPPA---------GYPPGAHPPGAYPGPSAPHHSGHG--VAGMLAG 120
           P    PS GYPPQGYPP+         GYPP  +PP AYPGPSAP H GHG  +  MLAG
Sbjct: 61  PPHGHPSQGYPPQGYPPSGYPGYPPSGGYPPSGYPPAAYPGPSAPSHHGHGSNMGAMLAG 120

Query: 121 GAAAAAAAYGAH---HVAHSAGHHYPHGVAHYG----HGHGHGGKFKHHGKFKHGKFGKH 174
           GAAAAAAAYG H   H  H  GH   HG+ H+G    HG GH GKFKHHGKFKHGKFGKH
Sbjct: 121 GAAAAAAAYGVHQLSHGHHQMGHGMHHGLGHHGKFKHHGFGHHGKFKHHGKFKHGKFGKH 180

[Close]

BLAST of CSPI04G06940 vs. NCBI nr
Match: gi|225427603|ref|XP_002271036.1| (PREDICTED: glycine-rich protein A3 [Vitis vinifera])

HSP 1 Score: 185.7 bits (470), Expect = 7.1e-44
Identity = 136/191 (71.20%), Postives = 141/191 (73.82%), Query Frame = 1


Query: 1   MGGGKDKH-DESDKGLFSHLAHGVA-HGAG-YPSHGYPPPG------GYPPPGG--YPPP 60
           MGGGKD H DESDKGLFS LAH  A H +G YP  GYPP G      GYPP GG  YPP 
Sbjct: 1   MGGGKDTHHDESDKGLFSQLAHAAAGHSSGQYPPQGYPPQGYPQHGGGYPPHGGGGYPPH 60

Query: 61  G--GYPPPGGYPPSHGYPPQGYPPAGYPPGAHPPGAYPGPSAPHHSGHGVAG-MLAGGAA 120
           G  GYPP GGYPP  GYPPQGYP AGYPPG++PP AYPGPSAP HSGHG  G MLAGGAA
Sbjct: 61  GGGGYPPQGGYPPQGGYPPQGYPQAGYPPGSYPPAAYPGPSAP-HSGHGGMGTMLAGGAA 120

Query: 121 AAAAAYGAHHVAHSAGHHYPHGVAH--YGHGHGHGGKFKHH-GKFKHGKFGKH-KHGKHG 174
           AAAAAYGAH + H  G H  H V H  YG  HGH GKFKHH GKFKHGK GK  KHG+HG
Sbjct: 121 AAAAAYGAHQLGH--GGHGGHNVGHGFYGGSHGH-GKFKHHGGKFKHGKHGKFGKHGQHG 180

The following BLAST results are available for this feature:

BLAST of CSPI04G06940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRP3_DAUCA	3.7e-24	61.38	Glycine-rich protein A3 OS=Daucus carota PE=2 SV=1	[more]
ANXA7_DICDI	4.5e-06	56.58	Annexin A7 OS=Dictyostelium discoideum GN=nxnA PE=1 SV=1	[more]

BLAST of CSPI04G06940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV55_CUCSA	9.2e-91	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G056610 PE=4 SV=1	[more]
F6HJ21_VITVI	5.0e-44	71.20	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0087g00780 PE=4 SV=...	[more]
A0A067KH25_JATCU	9.3e-43	69.49	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15382 PE=4 SV=1	[more]
V7CDY8_PHAVU	1.2e-42	62.98	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G278700g PE=4 SV=1	[more]
A0A0L9URY1_PHAAN	2.7e-42	65.46	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g066300 PE=4 SV=1	[more]

BLAST of CSPI04G06940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19200.1	2.4e-34	60.42	proline-rich family protein	[more]
AT5G45350.1	7.1e-34	58.73	proline-rich family protein	[more]
AT1G31750.1	4.9e-27	55.43	proline-rich family protein	[more]
AT5G17650.1	1.4e-26	53.48	glycine/proline-rich protein	[more]
AT5G41390.1	1.3e-06	66.67	PLAC8 family protein	[more]

BLAST of CSPI04G06940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691231\|ref\|XP_004150942.2\|	1.3e-90	100.00	PREDICTED: glycine-rich protein A3 [Cucumis sativus]	[more]
gi\|659101947\|ref\|XP_008451874.1\|	4.7e-80	94.22	PREDICTED: glycine-rich protein A3-like [Cucumis melo]	[more]
gi\|672180629\|ref\|XP_008810512.1\|	1.3e-45	68.21	PREDICTED: glycine-rich protein A3-like [Phoenix dactylifera]	[more]
gi\|695055819\|ref\|XP_009416107.1\|	4.2e-44	65.83	PREDICTED: glycine-rich protein A3-like [Musa acuminata subsp. malaccensis]	[more]
gi\|225427603\|ref\|XP_002271036.1\|	7.1e-44	71.20	PREDICTED: glycine-rich protein A3 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI04G06940.1	CSPI04G06940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31248	FAMILY NOT NAMED	coord: 1..173 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI04G06940	CsaV3_4G007150	Cucumber (Chinese Long) v3	cpicucB213
CSPI04G06940	Carg13143	Silver-seed gourd	carcpiB0051
CSPI04G06940	Carg11420	Silver-seed gourd	carcpiB0687

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI04G06940	Cucurbita maxima (Rimu)	cmacpiB342
CSPI04G06940	Cucurbita maxima (Rimu)	cmacpiB714
CSPI04G06940	Cucurbita moschata (Rifu)	cmocpiB332
CSPI04G06940	Cucurbita moschata (Rifu)	cmocpiB473
CSPI04G06940	Cucurbita moschata (Rifu)	cmocpiB707
CSPI04G06940	Cucumber (Chinese Long) v2	cpicuB182
CSPI04G06940	Melon (DHL92) v3.5.1	cpimeB294
CSPI04G06940	Watermelon (Charleston Gray)	cpiwcgB341
CSPI04G06940	Watermelon (97103) v1	cpiwmB314
CSPI04G06940	Cucurbita pepo (Zucchini)	cpecpiB223
CSPI04G06940	Cucurbita pepo (Zucchini)	cpecpiB396
CSPI04G06940	Bottle gourd (USVL1VR-Ls)	cpilsiB304
CSPI04G06940	Melon (DHL92) v3.6.1	cpimedB289
CSPI04G06940	Cucumber (Gy14) v2	cgybcpiB168
CSPI04G06940	Watermelon (97103) v2	cpiwmbB331
CSPI04G06940	Wax gourd	cpiwgoB367