CSPI01G13840 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G13840
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionDouble-stranded RNA-binding
LocationChr1 : 9437316 .. 9442385 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAATTTTGTTTTCTCTCTCTTCTCCTTTCTCTCTCACGAACTAGCCTCAGGGCTCTCTCTCTCTCTCTCTCTCTGAAAAGTGAAGGGAAAAAACCCCTAAAAACCTTTGATCTCGCCGGGTCTTCATCTCCGTCACCGACGACGGTGAGATTATTCTACTGTAGTTTGAATTGTTTTCACAGATTGCGGCGGATCGGATCTGGGCTAGGGTTTTTGGTTTCTGTGGAAAGCCCTATTGGTGGAGGGAGGAGGAGGAGGAGGTTAATTTGTCAAGTGAGGGGAAGGAGTGAAGTGGAGCTGACACCGAATCGGAGCAGAAATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTTAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCAAGGTTTAAAGCTACTGTTAACTTCAATGGTGAGATCTTTGAATGTCCTCAGTACTGCTCTACTCTCCGCCAGGCTGAGCACTCCGCCGCTGAGGTCGCCTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCAGCTAGAATCCTGGTGAGTCCTTTTTCTTTTTTTTCTTTTTAAACTTTGGTCAAACGGTTTAGTTTTTGTTCTTCTCTTCCGGCTTGCTTCTCTGCTTGATCTTCATTTCTGGGTTGTTGTTTTTTTTTTTTTTTTTTGTTTAACGAATTGATGGTACTGTTTACAGTAGGATTTTCTTCTACGAGCTGGGAAAATTTGTCGTTAGTTTTAGGTTTTTTGTTATGTTAGTGTTTTTCGTGCATTTTGTCTTGTTCTCCTCCTCTGAGCTTCCTCTTATCATGGCTGGTTTGTGAGGTTAAGAAGCTAGGTAATATAGGAATTGCACTATAGTGCGTTTAGTTAAACCATGAATATCTCGGTCGGTGGGTTATATAACTGAGATCTAAGAAGGATGGTTGTTCTGGTATTTGGTTTTGAAATGGTGGTTGTGCCATGGACTAGGGTGGCATTTTTCTTCTAACTTATGAGATAATCTTCTGATCTCTCTGATCGGCCGGAATTCTCTGACTAGGGCTACGGTTTGGGTGATCTTTGAACGAAAAGTGTGAACTTGTGACGCCTCTTTGAAGGTCCGTTCCATGAGAAGAAGTATCAAAGTTTTTTGTTTACCTTATTATCTCGGAGCCAGCTGTCGGGAGTAGTCTTCTTGGGCAAGTTGGTGTAATTAATTTTCTCATTAATGGGTTTGTCGGTCATCCAATTGTGTTTTTGGTAGCTCCCAACTTTGGCCCATTTTATTTCTCCGATCTAATAAATGATCAGATGGGTATCGTAGAAACGGCAGGGACCAAGAATCCAACACCAATTGTGATAAATTTGTTGGAAGCTGAGTTTCAGATAGAGATTATTCAAGTAGACCAATTAGAAATTAGGAGGTTGTTTCTATTATCTTTGTTACTATAAGTCTTAGAGGCTTTAAAAAACTTGGGTTCATCAATTATTTTATGTAATTACTCCTCACCGGTTTTGGGTACAATTGTTTGACTAACTTTTCTTCTTTGTTGTTTTTAAAAGTTATCCTCTTTCGCCGTTCGAGAAAATGTGTGCATGTGTCTCTGTCAACTTTATTGTGATTTAAAAACCGTTTATCTTGGTGTTTGAAGAGGGAGATGAGGAATTTTCGGTGGATATTTAGGGTTACTTTTCTCCATGGGCGTCCTTGTGTTCCAATAAGATGAATGCCCTGATATGGGGCTTTCTATTGTATCGCACTAGTGATTTAGTAAAATCAGGATTTGTTTGCCATAAGCATACTTGCAAAAAAGATCAAATATTTTGTTTCTGTTGGTTGCCGAGGCGCACGGCCTGGTTAGTTTATGTTTCTTAGGTTGAGTAATTTATTGCTCATTACCTTGTTTTTTTAACCCATTTAATGAGGTTTAATTGGTTTAAAGTTATTAGCTATGCTTCAATTTCTCTCATCCCTCAGTTAACATCTCTTTTAAAAAATAAAGACTAAAGATATCCTTCATAATCGGGGAATGTATCTGATGTTTGATATAACTATTTAGCAACCGTGCTCTTTAATAACTATTTCTCTACTGTAAACTCCAAATTGTAATTTTTGAACTTTTTTCCAAAAAGGTTTGGCCATGAAATAGAGTTCTAGTGGTTATGTGGTGGTGGCCTGGTGTGTGTAGACTGATGAAACAACACTCCACTTTATGGAGTTTCACTATGCAAAGCAATAGTTTAATGCTTATAGTGGTTGGAGCTCAGATAGCTTACTATTCATATGCAGCGTAGAAATTGTTTTGAATAAATTAGGAAAAACATCTTATAGAATTCAATTGTATTCAGTTCCAAACAGTAAACGCATTACAAATCAAATTATGATGTTGATTAGCTTCAAGTTCAGATTACCTCGGATTTAATGGAATCTGCAATTGCTATTATTAGTGATGAAGATAGTTTTCCGGGCAGCAGATCTCTGGAATGAAATTATTATTTAAAAAGTGTTTTTAGATTTATATAGTGTTGAGAACATGAAGTACATTATGATTAATTGAAAACATGAAATGCATTCATACCTGTAGTTACTTTCTGGTTAGTTTATTGTGTACTGTCTGCTAAAATGTAAAATGCATCTAAGATATTTTCATTGAATTGTCGTAAAAGAAAATATTGTGTGGAATCTACCAAACCTCTCGGGCATAGAATTTGTGAACAACTTTTCTGATATCGTTCATCTGTCTGTAAAATGTTTTTGAATTGAACTAAAGATGCTGCTAATATCTTATGGACGAGTAGGCTTGGCCGATTTTTAGTTCAATTACTTACTATAATCATCTGTGATCAGGATGAAACAGGAGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCATTGCCACAATATACAACATTCAGGTCAGGCCTTGGCCACCTACCTGTTTTTACGGGGATAGTAGAATTGGCTGGAATAACGTTTACTGGAGAACCTGCCAAGAACAAAAAACAGGCAGAGAAAAATGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATGTGAGTTATATATATACATACATAATACATGCATGTATATAATTTAAAACGGATACCATCACTATTATCCTGATGAAAAAGATAATAGATCATCTTTTTTTCTCACAGTTGATGTATGCAAGCATATGTGATATTACTATCTGCTGGAACATCGAGTTTAAATTCAAAAGTTTCTCTGTGAAATGTTTATGGGAACGTTCTTTATTATAGTGTTATTACTTCCTATCGAAGCTAGATATCCTATCCTGATGGCTTCCGCAATTCTTAAAAAATATTTTGCCCTCATCAGTTTTTATGATGATAGTCTGAAAACGTGGCTAAGATTTTTGAGACTAAGAGCACACATCACTGGATTACCTCTTAATGTAATGTCAATCGCGAACATATTTTACCACAATTCAAGAAAATTGTTCATCTTCCCATGGTGCTTCCTTTTTTTACTCGTTTTTTCTAATGTTTTGTTTTTAATTTTGACTAGTGGCTAAAGAATCAGCAAGCTCTTCGTCAGAACCAGAAAACAATGATGAGCTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAAGAAAAATTGGCTATGTCAAATCCAAATGCAACGATACCATTCCACAAAAAACTTCAAATTCAGACTCCAAGGCCAACTAGTCCCCAACGACCCCCTGCTCCCACATCGAAGATTCTTCCCCTAATTTGCCAGAAGGCAGCTCCTCGAAGCAGAGCTCCATTTTCAGCAAATAAAATTCCCATTCCTCAATCTCAAACTCCTGCACTAGAAGGCTCTGGACCCCGCCCCCAGAAGTTCAGTGCCGGAACCGCTCTTTCTTATATTCCTGTTCAGCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTTACAATTAGAACAGCAATGCCTGTGTTTTCTGCCCCGCCTCTACCGCAACCTTCAAAGCTTCCACCACAGCAAGTAATTCGAGTCCCTCCCATACGGATTGCCCCACCGGTTTCTATTAGGCAAGCAATTCCTGTCTTTGCTGCTCCCCCAGTACGCAAAGAAAATCCTCCTGTAGTTAAAAAAGAAGAATGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCACCTGCTCTTTCCGCACCTGTGACCGTGACTGTGCCCTCGCCGCCTACTGTAGTATCAACTGCTGAAGTAGAACAAGCTACATTTACAGTGGTGAACAGTCCGGAAGAAACTAAGACATTAGAGAACCTTGAGGAACTCAAAATTTGATGAGGTGATTCATTAGGAAAAGACCACATAGGAGATTGTCGTATGGTTTTGCAGTAAAGTTAGGTTATCTCATCTTGTCTGCATCTTATTTTGAGTGTCAACCCTTTTCTCTTTTCATCTTTTTTTTTTCTTTTTTTCTTTTTTTTTTAATCTTTTTCTCTTTTTCTCTTTTTTTCTTTTTGCCCCGTTTTGTTAAACATGAGTTGTTGAGAGGTGGAAAAATTAGTATGAGCATCCCTGCAGCATTGCCATTTCAACAGCCACTGTGTCAACTTATGTACTTATATATTAGTATCTTTGGGCATGTTGTCCCATCTTCTCCGAAAACTCTCTTCTGATCTGCATCCCCAAGACCAGCTCGATGAGGGTGCACCGAACATATTAAGTTCGTCATCCAGCGGTTCTGGTAACCATCTCATCGCTCGGGATCCTTCATTTCCATTTTTTGCTATTCTGTATTTTCATGCATGTATATATATAATATTTGCTAATCTTGTCTAGACAGTGATTCTGAATGGCCCCTAAAAGAGGTTGGGTTGGTGAAATTTCGAGGTGAACGATCCTTGTATTTCAGGTGTTGAAAATTGCTGTTTGCTAAGGAAGAGAAATAGTTCATCTTCCTCAAACTCATAAGCAGTTTTTGAGGATGGAGATCAAAATTGATATAGATTCAATTCGATTTAGTAAAATGCCCAATGAAACTTTGATTGATTCTCTCGTCTCTCAAGTCTAATTGTT

mRNA sequence

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTTAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCAAGGTTTAAAGCTACTGTTAACTTCAATGGTGAGATCTTTGAATGTCCTCAGTACTGCTCTACTCTCCGCCAGGCTGAGCACTCCGCCGCTGAGGTCGCCTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCAGCTAGAATCCTGGATGAAACAGGAGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCATTGCCACAATATACAACATTCAGGTCAGGCCTTGGCCACCTACCTGTTTTTACGGGGATAGTAGAATTGGCTGGAATAACGTTTACTGGAGAACCTGCCAAGAACAAAAAACAGGCAGAGAAAAATGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATTGGCTAAAGAATCAGCAAGCTCTTCGTCAGAACCAGAAAACAATGATGAGCTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAAGAAAAATTGGCTATGTCAAATCCAAATGCAACGATACCATTCCACAAAAAACTTCAAATTCAGACTCCAAGGCCAACTAGTCCCCAACGACCCCCTGCTCCCACATCGAAGATTCTTCCCCTAATTTGCCAGAAGGCAGCTCCTCGAAGCAGAGCTCCATTTTCAGCAAATAAAATTCCCATTCCTCAATCTCAAACTCCTGCACTAGAAGGCTCTGGACCCCGCCCCCAGAAGTTCAGTGCCGGAACCGCTCTTTCTTATATTCCTGTTCAGCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTTACAATTAGAACAGCAATGCCTGTGTTTTCTGCCCCGCCTCTACCGCAACCTTCAAAGCTTCCACCACAGCAAGTAATTCGAGTCCCTCCCATACGGATTGCCCCACCGGTTTCTATTAGGCAAGCAATTCCTGTCTTTGCTGCTCCCCCAGTACGCAAAGAAAATCCTCCTGTAGTTAAAAAAGAAGAATGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCACCTGCTCTTTCCGCACCTGTGACCGTGACTGTGCCCTCGCCGCCTACTGTAGTATCAACTGCTGAAGTAGAACAAGCTACATTTACAGTGGTGAACAGTCCGGAAGAAACTAAGACATTAGAGAACCTTGAGGAACTCAAAATTTGA

Coding sequence (CDS)

ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGTTGCTTTAATCTTCCCTCGTATACCTGCATTAGGGAAGGACCAGACCATGCGCCAAGGTTTAAAGCTACTGTTAACTTCAATGGTGAGATCTTTGAATGTCCTCAGTACTGCTCTACTCTCCGCCAGGCTGAGCACTCCGCCGCTGAGGTCGCCTTGAACGCCCTCTCTAACCGTGGTCCCCCTCATTCGCTTGCAGCTAGAATCCTGGATGAAACAGGAGTTTACAAGAACCTCCTGCAGGAAATTGCCCAAAGAGTTGGAGCGCCATTGCCACAATATACAACATTCAGGTCAGGCCTTGGCCACCTACCTGTTTTTACGGGGATAGTAGAATTGGCTGGAATAACGTTTACTGGAGAACCTGCCAAGAACAAAAAACAGGCAGAGAAAAATGCTGCAATGGCAGCTTGGTCAGCTTTAAAACAATTGGCTAAAGAATCAGCAAGCTCTTCGTCAGAACCAGAAAACAATGATGAGCTGGAGCAGATCACTATAGCTCGAGCCTTATTGAATTATCGCCAAAAAGAAAAATTGGCTATGTCAAATCCAAATGCAACGATACCATTCCACAAAAAACTTCAAATTCAGACTCCAAGGCCAACTAGTCCCCAACGACCCCCTGCTCCCACATCGAAGATTCTTCCCCTAATTTGCCAGAAGGCAGCTCCTCGAAGCAGAGCTCCATTTTCAGCAAATAAAATTCCCATTCCTCAATCTCAAACTCCTGCACTAGAAGGCTCTGGACCCCGCCCCCAGAAGTTCAGTGCCGGAACCGCTCTTTCTTATATTCCTGTTCAGCAGTTTAGGACATCTTGCCATGGTATTGCCCCACCAGTTACAATTAGAACAGCAATGCCTGTGTTTTCTGCCCCGCCTCTACCGCAACCTTCAAAGCTTCCACCACAGCAAGTAATTCGAGTCCCTCCCATACGGATTGCCCCACCGGTTTCTATTAGGCAAGCAATTCCTGTCTTTGCTGCTCCCCCAGTACGCAAAGAAAATCCTCCTGTAGTTAAAAAAGAAGAATGTCCAGCTCCAGCTGCTCCAAAAGAAGACCCACCTGCTCTTTCCGCACCTGTGACCGTGACTGTGCCCTCGCCGCCTACTGTAGTATCAACTGCTGAAGTAGAACAAGCTACATTTACAGTGGTGAACAGTCCGGAAGAAACTAAGACATTAGAGAACCTTGAGGAACTCAAAATTTGA
Homology
[Close]
BLAST of CSPI01G13840 vs. Swiss-Prot
Match: DRB2_ARATH (Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 2.9e-128
Identity = 276/436 (63.30%), Postives = 312/436 (71.56%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKLAM-SNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q  RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPQSQTPALEG-SGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A    I +    ALE  S  RPQ+  A     Y+P++QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVFSAPPLPQP-----SKLP-----PQQVIRVPPIRIAPPVSIRQAIPVFA-APPVR--- 360
           PVFSAPP+P P     ++LP     P  +   PP+RIAPPV+IR A+PVFA APPVR   
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 KENPPVVKKEECPAPAAPKEDPPALSAPVTVTVPSPPTVV------STAEVEQATFTVVN 415
              P V   E   +    KE  P L   + + V      +      ++ E E+A F   +
Sbjct: 361 AVKPTVEAGETRISSVQEKESIPVLPDSLEIGVEGSTITITDCEKTASKETERAEFKDSS 420

[Close]
BLAST of CSPI01G13840 vs. Swiss-Prot
Match: DRB6_ORYSJ (Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE=2 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 6.5e-112
Identity = 230/354 (64.97%), Postives = 263/354 (74.29%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLP+YTC+REGPDHAPRFKA VNFNGE FE P + +TLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPAYTCLREGPDHAPRFKAAVNFNGEQFESPGFFTTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL AL+ RGP +SLAARILDETGVYKNLLQE+AQRVGAPLP YTT RSGLGHLPVFT
Sbjct: 61  AEVALAALARRGPSYSLAARILDETGVYKNLLQEVAQRVGAPLPSYTTERSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAGITFTG+PAKNKKQAEKNAA AAWS+L+QL ++ ASSS+EPE+NDE EQI IAR
Sbjct: 121 CTVELAGITFTGDPAKNKKQAEKNAASAAWSSLRQLVRQEASSSNEPESNDEQEQIRIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTS-PQRPPAPTSKILPLICQKAAPRSR 240
           ALLNYR KEK+AM+N     PF KK  +Q  R T+ PQ   +  SKILPL   K+  RSR
Sbjct: 181 ALLNYRLKEKMAMANNPHASPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSR 240

Query: 241 APFSANKIPIPQSQTPALEGSGPRPQ-KFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A       SQTP      P P+ +F A  A  Y+PV  FR  CH +APPVT+RT++
Sbjct: 241 PESPA--ASDAASQTPFRPTESPNPRSRFPAAEAAPYVPVGHFRMPCHSMAPPVTVRTSI 300

Query: 301 PVFSAPPLPQP----SKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENP 349
           PVFSAPPLP P     +LPP  +   PPIR+A PV IR A P+F    V+   P
Sbjct: 301 PVFSAPPLPPPGARTQQLPP-LMSHPPPIRMASPVRIRPAPPLFTPSAVQGPKP 351

[Close]
BLAST of CSPI01G13840 vs. Swiss-Prot
Match: DRB2_ORYSJ (Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica GN=DRB2 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.5e-71
Identity = 150/227 (66.08%), Postives = 170/227 (74.89%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGE FE P +CSTLR AEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGETFESPAFCSTLRLAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LS RGP  SLAA++LDETG+YKNLLQE A R G  LP YTT RSG GH PVFT
Sbjct: 61  AEVALNELSKRGPSSSLAAKVLDETGIYKNLLQETAHRAGLKLPVYTTIRSGPGHTPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAK--ESASSSSEPE-NNDELEQIT 180
             VELAG+TFTG P K KKQA+KNAAMAAWS LKQL +  E +SSS  P+ ++D+ EQI 
Sbjct: 121 CTVELAGMTFTGNPGKTKKQAQKNAAMAAWSELKQLPRVGEPSSSSCPPDHDDDDQEQII 180

Query: 181 IARALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTS 225
           +AR L +  Q      +N   T P  K+ Q  + RP+S +RP  P S
Sbjct: 181 VARTLASLNQ------TNGGKT-PQQKEKQQSSNRPSS-RRPSYPKS 219

[Close]
BLAST of CSPI01G13840 vs. Swiss-Prot
Match: DRB5_ARATH (Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana GN=DRB5 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 5.2e-69
Identity = 164/343 (47.81%), Postives = 204/343 (59.48%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KLAMSNPNATIPFHKKLQIQTPRPTS----------- 240
            L  ++ KE                  SN +  I   + + + T + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEGSGPRPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S+    E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 SAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPVFSAPPLPQPS 311
                  Y  V     + + +AP V +R+ +PVF+APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]
BLAST of CSPI01G13840 vs. Swiss-Prot
Match: DRB3_ARATH (Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=1 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.7e-67
Identity = 172/363 (47.38%), Postives = 213/363 (58.68%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I+T R    Q     T+    L+C+K       
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLR----- 240

Query: 241 PFSANKIPIPQSQTPALEGSGPRPQKF---SAGTALSYIPVQQFRTSCHGIA-------- 300
             S N        T     S P PQ+F             V+     C   A        
Sbjct: 241 --SIN------LYTNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDD 300

Query: 301 --PPVTIRTA--MPVFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRK 349
             P + I+T+   P+ S+      SKL P     +   ++AP V IR  IPV +APP  K
Sbjct: 301 PKPEMRIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PK 335

[Close]
BLAST of CSPI01G13840 vs. TrEMBL
Match: A0A0A0LSF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132060 PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 1.1e-227
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360
           FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 415
           APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI
Sbjct: 361 APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]
BLAST of CSPI01G13840 vs. TrEMBL
Match: M5WM87_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024708mg PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 1.2e-149
Identity = 289/375 (77.07%), Postives = 312/375 (83.20%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 94  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 153

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 154 AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 213

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKE+ASSSSEPENNDELEQITIAR
Sbjct: 214 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 273

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALL YR KEK  M+NP A I F KK  +  PRPTSPQ P A TSKILPLICQK APRSR 
Sbjct: 274 ALLTYRLKEK--MANPTAPILFPKKFPVHNPRPTSPQPPSAHTSKILPLICQKQAPRSRL 333

Query: 241 PFSA-NKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
             +A N   IP SQ   LE    RP +F A  A  Y+P++Q RT CHGIAPPVTIRTA+P
Sbjct: 334 QSNATNDNRIPSSQPSPLESRVLRPHRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVP 393

Query: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECP-- 360
           VFSAPPLP P  + P Q +RVPP+R+APPV++RQA+PVF+APP+RK++PP  +KE+ P  
Sbjct: 394 VFSAPPLPPPPVM-PCQAMRVPPLRVAPPVTMRQAVPVFSAPPIRKDDPPTTRKEDPPII 453

Query: 361 ----APAAPKEDPPA 369
                P   K DPPA
Sbjct: 454 VKEDLPVIRKADPPA 465

[Close]
BLAST of CSPI01G13840 vs. TrEMBL
Match: A5B1V2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005501 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 9.7e-147
Identity = 299/425 (70.35%), Postives = 333/425 (78.35%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE P YC+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN+LSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKE+ASSSSE ENNDELEQITIAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAASSSSETENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSN-PNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           ALLNYR KEK+A++N P+ T+ F KK  IQ  R  SPQ PP  TSKILPLICQK  PR+R
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 241 APF-SAN---------KIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIA 300
            P  +AN         K P+P SQ  AL+    RPQ+F A  A+ Y+P++QFRT  HGIA
Sbjct: 241 PPSPTANDDPRQQHQVKNPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIRQFRTPYHGIA 300

Query: 301 PPVTIRTAMPVFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPP 360
           PPVTIR A+PVFSAPP    S LPPQ VIR P +RIAPPV +RQA+PVFAAPPVRKE+P 
Sbjct: 301 PPVTIRNAVPVFSAPP----SGLPPQ-VIRAPHMRIAPPVCVRQAVPVFAAPPVRKEDPL 360

Query: 361 VVKKEECPAPAAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENL 415
           VV+KE+                P   ++PS PT  S A VE+      N  +E + +++L
Sbjct: 361 VVRKED----------------PSAASLPSLPT-KSPAHVEETGSATANDLQEFEAVKSL 403

[Close]
BLAST of CSPI01G13840 vs. TrEMBL
Match: G7IRT5_MEDTR (Double-stranded RNA-binding motif protein OS=Medicago truncatula GN=MTR_2g094490 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 3.1e-145
Identity = 293/430 (68.14%), Postives = 333/430 (77.44%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN+LS+RGP HSLAA+ILDETGVYKNLLQEIAQRVGAPLPQYTT+RSGLGHLPVFT
Sbjct: 61  AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKE+ASSS+EPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR- 240
           ALLNYR KEK++MSNPNA IPF KK QIQ  RPTS Q P A TSKILPLICQK  PR+R 
Sbjct: 181 ALLNYRLKEKMSMSNPNARIPFQKKFQIQNIRPTSSQSP-ATTSKILPLICQKTGPRNRP 240

Query: 241 ---------------APFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTS 300
                          A  +++K  + Q Q+ A+E    RP +F A  A  Y+P++Q R  
Sbjct: 241 SSATPNENPRSRHPQAAATSDKSILQQPQSSAIESRVTRPLRFPAAGAPPYVPIRQMRP- 300

Query: 301 CHGIAPPVTIRTAMPVFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVR 360
           CHGIAP V++RT +PVFSAPPLP P+ +   Q+IR PP+RIAPPVSIRQA+PVFAAPP+R
Sbjct: 301 CHGIAPAVSVRTVIPVFSAPPLPPPTSV--HQIIRAPPVRIAPPVSIRQAVPVFAAPPLR 360

Query: 361 KENPPVVKKEECPAPAAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETK 415
           K+ P  ++K           D PA S PV      P  ++   + E       NSP + +
Sbjct: 361 KDEPAPIQK-----------DLPASSTPVEQD-KLPAKILEMDKTEN------NSPPQPE 408

[Close]
BLAST of CSPI01G13840 vs. TrEMBL
Match: F6GU09_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02810 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 4.1e-145
Identity = 295/435 (67.82%), Postives = 333/435 (76.55%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE P YC+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPNYCTTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN+LSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKE+A+SSSE ENNDELEQITIAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKEAANSSSETENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSN-PNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           ALLNYR KEK+A++N P+ T+ F KK  IQ  R  SPQ PP  TSKILPLICQK  PR+R
Sbjct: 181 ALLNYRLKEKMAIANSPSGTLSFPKKFPIQNSRLFSPQLPPVATSKILPLICQKTPPRNR 240

Query: 241 APF--------------------SANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQ 300
            P                     ++++ P+P SQ  AL+    RPQ+F A  A+ Y+P++
Sbjct: 241 PPSPTANDGSMPSSQPRSRPTSTTSSENPVPPSQPLALDVRAVRPQRFPAAGAVPYVPIR 300

Query: 301 QFRTSCHGIAPPVTIRTAMPVFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFA 360
           QFRT  HGIAPPVTIR A+PVFSAPP    S LPPQ VIR P +RIAPPV +RQA+PVFA
Sbjct: 301 QFRTPYHGIAPPVTIRNAVPVFSAPP----SGLPPQ-VIRAPHMRIAPPVCVRQAVPVFA 360

Query: 361 APPVRKENPPVVKKEECPAPAAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNS 415
           APPVRKE+P VV+KE+                P   ++PS PT  S A VE+      N 
Sbjct: 361 APPVRKEDPLVVRKED----------------PSAASLPSLPT-KSPAHVEETGSATAND 413

[Close]
BLAST of CSPI01G13840 vs. TAIR10
Match: AT2G28380.1 (AT2G28380.1 dsRNA-binding protein 2)

HSP 1 Score: 459.9 bits (1182), Expect = 1.6e-129
Identity = 276/436 (63.30%), Postives = 312/436 (71.56%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE PQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLP+YTTFRSGLGH PVFT
Sbjct: 61  AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTG+PAKNKKQAEKNAAMAAWS+LKQLAKE++SS  EPEN DELEQ+ IAR
Sbjct: 121 GTVELAGITFTGDPAKNKKQAEKNAAMAAWSSLKQLAKETSSSMPEPENIDELEQVIIAR 180

Query: 181 ALLNYRQKEKLAM-SNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSR 240
           AL+NYR KE +   S+ +A +PF KK  +Q  RPTSPQ  PA TS+ILP IC K   RS 
Sbjct: 181 ALINYRIKENIGTGSSSSAPVPFAKKFFMQNLRPTSPQPSPATTSRILPFICPKQPSRSS 240

Query: 241 APFSANKIPIPQSQTPALEG-SGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAM 300
               A    I +    ALE  S  RPQ+  A     Y+P++QFR+ CHG+APPVTIRTA+
Sbjct: 241 RSSLAATSGIDRIMAAALESRSYQRPQQRFANP--PYVPMRQFRSQCHGMAPPVTIRTAV 300

Query: 301 PVFSAPPLPQP-----SKLP-----PQQVIRVPPIRIAPPVSIRQAIPVFA-APPVR--- 360
           PVFSAPP+P P     ++LP     P  +   PP+RIAPPV+IR A+PVFA APPVR   
Sbjct: 301 PVFSAPPMPPPPCTNNTQLPSSVYVPSLMRTAPPVRIAPPVTIRTAVPVFASAPPVRIRT 360

Query: 361 KENPPVVKKEECPAPAAPKEDPPALSAPVTVTVPSPPTVV------STAEVEQATFTVVN 415
              P V   E   +    KE  P L   + + V      +      ++ E E+A F   +
Sbjct: 361 AVKPTVEAGETRISSVQEKESIPVLPDSLEIGVEGSTITITDCEKTASKETERAEFKDSS 420

[Close]
BLAST of CSPI01G13840 vs. TAIR10
Match: AT5G41070.1 (AT5G41070.1 dsRNA-binding protein 5)

HSP 1 Score: 263.1 bits (671), Expect = 2.9e-70
Identity = 164/343 (47.81%), Postives = 204/343 (59.48%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEH+A
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEV+LN LS+R P  SL A+ILDETG+YKNLLQE A R G  LP YT+ RSG  H P F+
Sbjct: 61  AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG+TFTGE AK KKQAEKNAA+AAWS+LK++       SS    ++E EQ  +AR
Sbjct: 121 CTVELAGMTFTGESAKTKKQAEKNAAIAAWSSLKKM-------SSLDSQDEEKEQEAVAR 180

Query: 181 ALLNYRQKE--------------KLAMSNPNATIPFHKKLQIQTPRPTS----------- 240
            L  ++ KE                  SN +  I   + + + T + +S           
Sbjct: 181 VLSRFKPKEVRRRETTNQWRRRTSQQDSNKDLLIERLRWINLLTNQASSSSSTSTPNQHK 240

Query: 241 --------PQRPPAPTSKILPLICQKAAPRSRAPFSANKIPIPQSQTPALEGSGPRPQKF 300
                   P  PP  +SKILP I Q     S+   +     +  S+    E S    ++ 
Sbjct: 241 NSSFISLIPPPPPPKSSKILPFIQQYKDRSSQEAKTETATEMINSKAKVNETSTRLSKQM 300

Query: 301 SAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPVFSAPPLPQPS 311
                  Y  V     + + +AP V +R+ +PVF+APP P+P+
Sbjct: 301 PFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPP-PKPN 335

[Close]
BLAST of CSPI01G13840 vs. TAIR10
Match: AT3G26932.1 (AT3G26932.1 dsRNA-binding protein 3)

HSP 1 Score: 256.9 bits (655), Expect = 2.1e-68
Identity = 172/363 (47.38%), Postives = 213/363 (58.68%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCF+LPSYTC REGPDHAPRFKA+VNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVAL+ALS++GP  SL AR+LDETG+YKNLLQE A R G  LP YT+ RSG GH+P F+
Sbjct: 61  AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
             VELAG++F GE AK KKQAEKNAA+AAW +L+++ +       +P   +E EQ  +AR
Sbjct: 121 CTVELAGMSFNGESAKTKKQAEKNAAIAAWFSLRKMPR------LDPLRGEEKEQEIVAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
            L  +R KE +    PN +    ++  I+T R    Q     T+    L+C+K       
Sbjct: 181 VLSRFRPKE-VKRREPNQS---RRRTVIRTIR----QNTTTTTTTTGDLLCEKLR----- 240

Query: 241 PFSANKIPIPQSQTPALEGSGPRPQKF---SAGTALSYIPVQQFRTSCHGIA-------- 300
             S N        T     S P PQ+F             V+     C   A        
Sbjct: 241 --SIN------LYTNEASSSSPPPQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSLDD 300

Query: 301 --PPVTIRTA--MPVFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRK 349
             P + I+T+   P+ S+      SKL P     +   ++AP V IR  IPV +APP  K
Sbjct: 301 PKPEMRIKTSSPSPLSSSVERNCYSKLLPFPSFVLNHQKLAPAVHIRSVIPVCSAPP-PK 335

[Close]
BLAST of CSPI01G13840 vs. TAIR10
Match: AT3G62800.1 (AT3G62800.1 double-stranded-RNA-binding protein 4)

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-29
Identity = 73/172 (42.44%), Postives = 96/172 (55.81%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           +YK QLQ  A +    LP Y   REGP HAPRF+  V F G+ F+  ++  TL+ AEH+A
Sbjct: 4   VYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAEHAA 63

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           A++A+ +L+ + P     A        YKNLLQEIAQ+  + LP Y T  SG  H P FT
Sbjct: 64  AKIAVASLTPQSPEGIDVA--------YKNLLQEIAQKESSLLPFYATATSGPSHAPTFT 123

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDE 173
             VE AG  F+GE AK KK AE +AA  A+ ++K        S + P    E
Sbjct: 124 STVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQE 167

[Close]
BLAST of CSPI01G13840 vs. TAIR10
Match: AT1G09700.1 (AT1G09700.1 dsRNA-binding domain-like superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 6.9e-19
Identity = 61/183 (33.33%), Postives = 95/183 (51.91%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           ++K++LQE AQ+     P Y  ++EGP H   F++TV  +G  +         + AE SA
Sbjct: 15  VFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSA 74

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFR-SGLGHLPVF 120
           AEVAL  L+         ++ + ETG+ KNLLQE AQ++   +P Y   +   LG +  F
Sbjct: 75  AEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLYQCQKVETLGRVTQF 134

Query: 121 TGIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIA 180
           T  VE+ GI +TG   + KK AE +A   A  A++   K + ++ +        E+ TI 
Sbjct: 135 TCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLANYNTQLTVLPCEKKTIQ 194

Query: 181 RAL 183
            A+
Sbjct: 195 AAI 197

[Close]
BLAST of CSPI01G13840 vs. NCBI nr
Match: gi|449443363|ref|XP_004139447.1| (PREDICTED: double-stranded RNA-binding protein 2 [Cucumis sativus])

HSP 1 Score: 797.0 bits (2057), Expect = 1.6e-227
Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360
           FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 415
           APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI
Sbjct: 361 APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 414

[Close]
BLAST of CSPI01G13840 vs. NCBI nr
Match: gi|659071913|ref|XP_008462570.1| (PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo])

HSP 1 Score: 784.3 bits (2024), Expect = 1.1e-223
Identity = 410/414 (99.03%), Postives = 410/414 (99.03%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR
Sbjct: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA
Sbjct: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240

Query: 241 PFSANKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300
           PFSANKIPI QSQTP LEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV
Sbjct: 241 PFSANKIPISQSQTPVLEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMPV 300

Query: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360
           FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA
Sbjct: 301 FSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAPA 360

Query: 361 APKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 415
           APKEDPPALSAP  VTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI
Sbjct: 361 APKEDPPALSAP--VTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 412

[Close]
BLAST of CSPI01G13840 vs. NCBI nr
Match: gi|645217404|ref|XP_008225693.1| (PREDICTED: double-stranded RNA-binding protein 2 [Prunus mume])

HSP 1 Score: 545.0 bits (1403), Expect = 1.1e-151
Identity = 302/421 (71.73%), Postives = 335/421 (79.57%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKE+ASSSSEPENNDELEQITIAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALL YR KEK  M+NP A I F KK  +   RPTSPQ P A TSKILPLICQK APRSR 
Sbjct: 181 ALLTYRLKEK--MANPTAPILFPKKFPVHNARPTSPQPPSAHTSKILPLICQKQAPRSRL 240

Query: 241 PFSA-NKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
             +A N   IP SQ   LE    RP +F A  A  Y+P++Q RT CHGIAPPVTIRTA+P
Sbjct: 241 QSNATNDNRIPSSQPSPLESRVLRPNRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVP 300

Query: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECP-- 360
           VFSAPPLP P  + P Q +RVPP+R+APPV++RQA+PVF+APP+RK++PP  +KE+ P  
Sbjct: 301 VFSAPPLPPPPVM-PCQAMRVPPLRVAPPVTMRQAVPVFSAPPIRKDDPPTTRKEDPPII 360

Query: 361 ----APAAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELK 415
                P   K DPPA+       + S P     A+VE+      NS +E+KT+++LE+LK
Sbjct: 361 VKEDLPVIRKADPPAV-------IASSPQNDLIAQVEETGSASSNSLQESKTVQSLEQLK 411

[Close]
BLAST of CSPI01G13840 vs. NCBI nr
Match: gi|1009115820|ref|XP_015874436.1| (PREDICTED: double-stranded RNA-binding protein 2-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 544.3 bits (1401), Expect = 1.9e-151
Identity = 296/415 (71.33%), Postives = 333/415 (80.24%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGE FE P YCSTLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGETFESPHYCSTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN+LSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLPQYTT+RSGLGHLPVFT
Sbjct: 61  AEVALNSLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G VELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAK++ASSS EPENNDELEQITIAR
Sbjct: 121 GTVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKDTASSSPEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           AL  YR KEK+AM+NPNA IPF KK  +Q+PRPTSPQ PPA TSKILPLICQKAAPRSR 
Sbjct: 181 ALQIYRLKEKIAMANPNAPIPFPKKFPVQSPRPTSPQPPPATTSKILPLICQKAAPRSRP 240

Query: 241 PFSANKIPIPQSQTPALEG-SGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
             +A       + +P  EG +  RP KF A  A  Y+P++Q RT CHG+APPVTIRTA+P
Sbjct: 241 QLNA------VNDSPLSEGHATTRPLKFPAAGATPYVPIRQLRTPCHGVAPPVTIRTAVP 300

Query: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECPAP 360
           VFSAPP P P  + P QV+R P +RIAPPV+IRQA+PVFA+PPVRKE+ P ++KE+  A 
Sbjct: 301 VFSAPPRPSPPAV-PCQVMRPPHVRIAPPVTIRQAVPVFASPPVRKEDAPAIRKEDPAAI 360

Query: 361 AAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKTLENLEELKI 415
            AP      L                 A+ E+   T VN+P+E +T+++LE+LKI
Sbjct: 361 VAPNMQNKLL-----------------AQREETGSTSVNNPQEVETVQSLEQLKI 391

[Close]
BLAST of CSPI01G13840 vs. NCBI nr
Match: gi|657986387|ref|XP_008385320.1| (PREDICTED: double-stranded RNA-binding protein 2 [Malus domestica])

HSP 1 Score: 542.0 bits (1395), Expect = 9.3e-151
Identity = 296/429 (69.00%), Postives = 335/429 (78.09%), Query Frame = 1 

Query: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFECPQYCSTLRQAEHSA 60
           MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE P YC+TLRQAEHSA
Sbjct: 1   MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCTTLRQAEHSA 60

Query: 61  AEVALNALSNRGPPHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120
           AEVALN LSNRGP HSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT
Sbjct: 61  AEVALNYLSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 120

Query: 121 GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKESASSSSEPENNDELEQITIAR 180
           G+VELAGITFTGEPAKNKKQAEKNAAMAAWS+LKQLAKE+ASSSSEPENNDELEQITIAR
Sbjct: 121 GVVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSSEPENNDELEQITIAR 180

Query: 181 ALLNYRQKEKLAMSNPNATIPFHKKLQIQTPRPTSPQRPPAPTSKILPLICQKAAPRSRA 240
           ALLNYR KEK+ M+NP A I F KK  +Q  RPTSPQ PPA TSKILPLICQK APRSR 
Sbjct: 181 ALLNYRIKEKMTMANPTAPILFPKKFPVQNRRPTSPQPPPAHTSKILPLICQKQAPRSRY 240

Query: 241 PFSA-NKIPIPQSQTPALEGSGPRPQKFSAGTALSYIPVQQFRTSCHGIAPPVTIRTAMP 300
             +A +   +  SQ   L+    RPQ+F A  A  Y+P++Q RT CHGIAPPVTIRTA+P
Sbjct: 241 QSNATHDNRVTSSQASPLDSRVMRPQRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVP 300

Query: 301 VFSAPPLPQPSKLPPQQVIRVPPIRIAPPVSIRQAIPVFAAPPVRKENPPVVKKEECP-- 360
           VFSAPPLP P  + P Q +R+PP+R+APPV++RQA+PVF+APPV+K++PP  +KEE P  
Sbjct: 301 VFSAPPLPPPHAM-PCQTMRIPPLRVAPPVTMRQAVPVFSAPPVKKDDPPTTRKEESPVI 360

Query: 361 ------------APAAPKEDPPALSAPVTVTVPSPPTVVSTAEVEQATFTVVNSPEETKT 415
                       +    KEDPP +       V          +VE+      +  EE+KT
Sbjct: 361 VKEDPXIIVKEDSXIILKEDPPIIPKDPAAVVAPCVQNKPIGQVEETVRXAADDLEESKT 420

The following BLAST results are available for this feature:
BLAST of CSPI01G13840 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DRB2_ARATH2.9e-12863.30Double-stranded RNA-binding protein 2 OS=Arabidopsis thaliana GN=DRB2 PE=1 SV=1[more]
DRB6_ORYSJ6.5e-11264.97Double-stranded RNA-binding protein 6 OS=Oryza sativa subsp. japonica GN=DRB6 PE... [more]
DRB2_ORYSJ2.5e-7166.08Double-stranded RNA-binding protein 2 OS=Oryza sativa subsp. japonica GN=DRB2 PE... [more]
DRB5_ARATH5.2e-6947.81Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana GN=DRB5 PE=1 SV=1[more]
DRB3_ARATH3.7e-6747.38Double-stranded RNA-binding protein 3 OS=Arabidopsis thaliana GN=DRB3 PE=1 SV=1[more]
BLAST of CSPI01G13840 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSF2_CUCSA1.1e-227100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132060 PE=4 SV=1[more]
M5WM87_PRUPE1.2e-14977.07Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024708mg PE=4 S... [more]
A5B1V2_VITVI9.7e-14770.35Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005501 PE=4 SV=1[more]
G7IRT5_MEDTR3.1e-14568.14Double-stranded RNA-binding motif protein OS=Medicago truncatula GN=MTR_2g094490... [more]
F6GU09_VITVI4.1e-14567.82Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02810 PE=4 SV=... [more]
BLAST of CSPI01G13840 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G28380.11.6e-12963.30 dsRNA-binding protein 2[more]
AT5G41070.12.9e-7047.81 dsRNA-binding protein 5[more]
AT3G26932.12.1e-6847.38 dsRNA-binding protein 3[more]
AT3G62800.14.3e-2942.44 double-stranded-RNA-binding protein 4[more]
AT1G09700.16.9e-1933.33 dsRNA-binding domain-like superfamily protein[more]
BLAST of CSPI01G13840 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443363|ref|XP_004139447.1|1.6e-227100.00PREDICTED: double-stranded RNA-binding protein 2 [Cucumis sativus][more]
gi|659071913|ref|XP_008462570.1|1.1e-22399.03PREDICTED: double-stranded RNA-binding protein 2 [Cucumis melo][more]
gi|645217404|ref|XP_008225693.1|1.1e-15171.73PREDICTED: double-stranded RNA-binding protein 2 [Prunus mume][more]
gi|1009115820|ref|XP_015874436.1|1.9e-15171.33PREDICTED: double-stranded RNA-binding protein 2-like isoform X2 [Ziziphus jujub... [more]
gi|657986387|ref|XP_008385320.1|9.3e-15169.00PREDICTED: double-stranded RNA-binding protein 2 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051607 defense response to virus
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0070919 production of siRNA involved in chromatin silencing by small RNA
biological_process GO:0010267 production of ta-siRNAs involved in RNA interference
biological_process GO:0070918 production of small RNA involved in gene silencing by RNA
biological_process GO:0040029 regulation of gene expression, epigenetic
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0003725 double-stranded RNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G13840.1CSPI01G13840.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainGENE3DG3DSA:3.30.160.20coord: 2..68
score: 2.9E-22coord: 88..154
score: 3.5
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 2..68
score: 4.8E-16coord: 88..152
score: 7.5
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 2..69
score: 1.5E-20coord: 88..154
score: 2.8
IPR014720Double-stranded RNA-binding domainPROFILEPS50137DS_RBDcoord: 1..70
score: 11.893coord: 87..155
score: 10
NoneNo IPR availablePANTHERPTHR10910EUKARYOTE SPECIFIC DSRNA BINDING PROTEINcoord: 1..218
score: 5.0E
NoneNo IPR availablePANTHERPTHR10910:SF94SUBFAMILY NOT NAMEDcoord: 1..218
score: 5.0E
NoneNo IPR availableunknownSSF54768dsRNA-binding domain-likecoord: 88..158
score: 9.9E-19coord: 2..68
score: 2.67