CSPI01G04900 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G04900
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 3146338 .. 3146580 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATGAAAAGAGAGGAGCACCTGGTGGTTGCTGCTGGTAAAGTGGTAGTGGTGGTGACAGAGGAGGATGAGGGCTGTTTCCGCGGTGTCGCTGCTGCTAATGCTTCCCTTCTTTCTTTTCTTCTTCTTCTTTTTCTCTTTCTCTGGGAGCCCAGCCTGCTGTCTCGAATTGAACTCGTGGACCTAAGGCCAGTTAGATACTTTTCGAGGCATTCATTGTTTTTTTCTCCATTATTTTAA

mRNA sequence

ATGGAGATGAAAAGAGAGGAGCACCTGGTGGTTGCTGCTGGTAAAGTGGTAGTGGTGGTGACAGAGGAGGATGAGGGCTGTTTCCGCGGTGTCGCTGCTGCTAATGCTTCCCTTCTTTCTTTTCTTCTTCTTCTTTTTCTCTTTCTCTGGGAGCCCAGCCTGCTGTCTCGAATTGAACTCGTGGACCTAAGGCCAGTTAGATACTTTTCGAGGCATTCATTGTTTTTTTCTCCATTATTTTAA

Coding sequence (CDS)

ATGGAGATGAAAAGAGAGGAGCACCTGGTGGTTGCTGCTGGTAAAGTGGTAGTGGTGGTGACAGAGGAGGATGAGGGCTGTTTCCGCGGTGTCGCTGCTGCTAATGCTTCCCTTCTTTCTTTTCTTCTTCTTCTTTTTCTCTTTCTCTGGGAGCCCAGCCTGCTGTCTCGAATTGAACTCGTGGACCTAAGGCCAGTTAGATACTTTTCGAGGCATTCATTGTTTTTTTCTCCATTATTTTAA
Homology
[Close]
BLAST of CSPI01G04900 vs. TrEMBL
Match: A0A0A0LT29_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G029590 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 9.7e-35
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60
          MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL
Sbjct: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60

Query: 61 VDLRPVRYFSRHSLFFSPLF 81
          VDLRPVRYFSRHSLFFSPLF
Sbjct: 61 VDLRPVRYFSRHSLFFSPLF 80

[Close]
BLAST of CSPI01G04900 vs. NCBI nr
Match: gi|700208836|gb|KGN63932.1| (hypothetical protein Csa_1G029590 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-34
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1 

Query: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60
          MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL
Sbjct: 1  MEMKREEHLVVAAGKVVVVVTEEDEGCFRGVAAANASLLSFLLLLFLFLWEPSLLSRIEL 60

Query: 61 VDLRPVRYFSRHSLFFSPLF 81
          VDLRPVRYFSRHSLFFSPLF
Sbjct: 61 VDLRPVRYFSRHSLFFSPLF 80

The following BLAST results are available for this feature:
BLAST of CSPI01G04900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G04900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT29_CUCSA9.7e-35100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G029590 PE=4 SV=1[more]
BLAST of CSPI01G04900 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G04900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208836|gb|KGN63932.1|1.4e-34100.00hypothetical protein Csa_1G029590 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G04900.1CSPI01G04900.1mRNA