CSPI01G01680 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G01680
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Succinate dehydrogenase subunit 7, mitochondrial
Location	Chr1 : 1120897 .. 1124711 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTTCTTTCTCCCTCAATCCCTTCTTTCTTTATCTCTTCCTTCAATCTTTTCACCTTTTGGCCCATCCACAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTGTAAGCATATCTATCTATCTTCTTATTTTCCATCTTTAATTGTTATTCTACCTGTTTATTGCATCGGTTTGGATATTTAGTTAATTCCTTGTTTACCTCATACTAGCTCCATTAAGTTGATTGATCTCTCGTATGTATTTGAATTTTTCCATGTCAGTATAGATGGAACTTTTTCGAAGCTGTTCAGATCGAACTGCTTGAGCTTCTACATTTAGGTTCATGAAATTGACGGCTGCTGTTTTCTACATTAATCTGTTACGATGCTATGGCATGAAACCTTTGTGATTTTTTTTTTCTTTTATTGGTTGTGAATATTAAAGGGTTGATTTGCATGCGTGTTCTCGAACTTTGCAACTATACATTCCACACCGATACTTGGAAATTGGAACTATTTTAGAAAATATATATTCCCTTCATTTCGCGAAGGATTTTGCTATACATGTGGATAGGTTAACATGTCTACCAAAATCTTGGTTCATCTCTTGTATTTTGTTGATGCACTTTTGTTGCTGTGTATGTGATTGCAATGACTTATTGGCATTGAATTTTATTATGTTGAATGTCTGGCAGTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTGCAGGTATTGGCCCTTTTTTCTTTTAATAAATAAAATATGTTTCTCTTTGTCCCGTGGGGTTCTTGCTCTGCTCTTTTTGCCATTATAGCTACACATGTGATTGGTGTGTGTGTGGATGAAACTTTTGGATGGTGTATTTCCTTATTGTGTTACAAGAATGTCACGTCTTTACTTGCTCCTTAGAGGTGAAAATTAGCTCTAGCCATTTTGGTTCGGTTAATTCTTAGTATTGTATTAGCTGAAAAGTATCTTAGGTGAACTCAGAAGGTAGAAATAATACCTACTGAAGTGGAAGAAAGGGGCAGCAGCTTGTATGGGGTGTTTTTAGTAGAAACGTTGGGTTTCAATGACTGCAAAAGAAGAAACTTGAGACTCAAATTTAGAACAAAGTAGTGTTTAGTTAAATAAGTGCCAATGTTTAAGTTGATCGAAATTTTGGATTTATCTTATAAGAACTTTTACTGATATGTGAATTTTGGAGATGGTATTTCTTTTAGTACTAACGATCATTTAAACATGCCACTCCGTTGACCAATTCAGGTACAGGTTTTCTTAATTTAGGATAGTAGTGACTGCCAGATTAATATTAGTTTCATTTACAGTTTAGTGGCCTCAACCTTGAGTTCTATCTAAGGATGTTATTAGGTGATACAGCTAGCTAATAACAGTTCAATTGAAAGTCTAAGTAGCTATTTTTCCTGTTTATTTAAGTATCATGATGACACTTGGTCGTAGACAATAGATCAACTGGTAAATGCACATACAAGTTACTTATTTTCTTTGCAATTTTGATTCTCTTTACAATAAAAAGTAGAAGAGGAGGAATACAATCAAATTCTTCAAGATATTATATAACAAACAGGATAATAATGTAGTATGACTCTCCTTGAAGAGAACAGCAAAACAAAACACTCTTCCAGACATTGTTCATATGAGCTTTTCTGTCTTCAAAAGATTCTTCTCGTTCTTTCTTTTTAGTTCCCTTAATTCTCAACAAAAACTGGAATAACTATACTGAATATGATCTTGGTTGCCAGTGATGCCAATTGCCGCCATATAATTTGGGGTCCTTAATAATTCTGCAGAAGCCCAATCAGGTTAAAGATTTTCGGCTACTTCCATTGAAGTGGTCAAGAGACCAACTTCTAGGGACCTGGTAATCTAGTTCTCCAATGAGCTTTCACCACCTTGAGGTTTCATGTGTGTGCTCGTGGACACTCATATATATATGAAAATATGTCTGTCAAGCAGGTCATGAGTGTTGATTGATCTGCGAAGCAGTAAGAAAATGAAGATTGAAGACCACCTCTAAGCTGCACATCATATTCACCAACTTATTAGGCAATTCTGCGTTTCCATAGTTTGATTCAGCAATATTGCATTAGTTGAACTTGATATTAGCTTCCAGCCTCCATATGCTAGAGCCTAGTGCCCTCATCTCCAAAAACATTCGTAAGGATGCCAATAATGCTTCTCTATTATTCAGATTTCTCCAAAAATGTCAATTCAAACTTGTAGAAAACGAACAGTTTAAGTTTAACGGTAAGTCCAGTGAAGCGTGGGCAATATCTTGTTTGCTGTGCCTAAGTCAACTGAGCTCGTACACTAACATTTGATCTCCCCAAAATCTTTATTTCCATGACTAGAATGTGGACAGTGAAGCTTTTCTCTCTCCAGTTTTGAGTGCCTCACATTTGCGCTAGGTTGCTGTTAGGAACCAAGGTAGTTATGAGACGCCTTTGTATTGTAGGAACGAAGGTAGGTATGCGATGCTTTGTGTCCCCATCATTAGAATGGGATGACCAATATGGTATTCAAGTGGCTTGGCTCTCCCATCTCAATAGCTGGATTTTGGGATGTAGTTCTCTAAGGTGCTTAAGTACCTAACAATAGTATCAGAGCTGGTTGTCAATGTTTCAGAGTGGAACCGGTGGGACATCGACTTTCCGGGAATGGGTACTGTTAGAAATCAAGGTAGTTATGGGATTACCAATATGGTACTTAAGCGGCTTGGCTCTCCCACCCCAATTGTTGACTTGGGGTGTGGTTCTCCAAGGTGCTTAAGGTACCTAACAGCTGCCTGATGTGTGAATTGGCATGATGTCGAAACATCTTTGATTTTTTTCCTCTTTTGATGTTCTTTGTTCTGAGCTCTCCCGGTCATTAGAAGGTTCTTTTTTTCTTCCTTATTTTAATTTCTGCAATGTTACCATTATCTTTGTTTTTATTTCAAGAAATAAAAACATTCATTATCAAAGGGATATACAAAAAGATGGGGGAAATGGGATAAATCCACACATCAAGTATAGGAGGGTAAAATTTTCAATATATGACAGTACTTCCAGTTTTTCCTGAAAATATTTTGGTTAGGTGGTTAAGTGAAGCTTGGGAGTGAAAGCGTCAAGATCTGTTTTGTGGGCCACTTGTTTAGAAAGAAATGACACAATTTCTAACACAACATGCATAGCATTTTAAGAGATGGAAAGTTTCTCTGGTCAAAATCTTACAAATCATTCGTTAATTTATCCTCTTTCGTCAAGGGTATTCTTTTGTTCTTTTATCTACCCATGTTCGATGGTAGGAAGGATATCTTTTAAGGGATGTTTGGTCTACCAACTTATAACTCAATTCACTAGCTTCATTAGTGTTCGTTATTGAAGTTTGTACTATATCTTCTCTTCTAGACTAAACAACTCTACACTCTAAACATGGATTTCATAACTTCAATATGTTAACTCTCAACTTACAACTCAACTCAACCCACCAAACACCTCCTTAGTATCTCTTCCATTCCTTTGAATGACATTTTTACATCTTTTATTTCCCCACCCCCAAAATAAACAAATCTTTGATCTCTATCATCATATTTTTCAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACA

mRNA sequence

ATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACA

Coding sequence (CDS)

ATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCGACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACA

Homology

[Close]

BLAST of CSPI01G01680 vs. Swiss-Prot
Match: SDH7B_ARATH (Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana GN=SDH7B PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-30
Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKA 60
          MAF LN ++++SH RS S     D  S+SRRGFH+EPGTREKALLAED  L+RF+SHKK+
Sbjct: 1  MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61 VSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT 97
          V +LKR+GDVLT+VVVAGCCYEIYVKA M++EA    K+
Sbjct: 61 VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKS 99

[Close]

BLAST of CSPI01G01680 vs. Swiss-Prot
Match: SDH7A_ARATH (Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana GN=SDH7A PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 8.6e-26
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN S ++SH RS SQ    +L  SRRGFHVE G REKALLAED  LRRF+SHKK V
Sbjct: 1  MAFLLNTS-ISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR 92
           RLKR+GDVLT+VVVAGCCYEIY +  MR+EA+
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQ 91

[Close]

BLAST of CSPI01G01680 vs. Swiss-Prot
Match: SDH7_ORYSJ (Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH7 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-11
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1


Query: 8  STLASHFRSQSQVDPS----SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKR 67
          S L S  RS     P+       RRGFHVE G REKALL ED  L+RF+S+K +V ++ +
Sbjct: 8  SALRSRLRSPQPQAPALPHLQPPRRGFHVELGAREKALLEEDTALKRFKSYKNSVKQVSK 67

Query: 68 VGDVLTIVVVAGCCYEIYVKA 85
          VG++LT VV+  C YEI   A
Sbjct: 68 VGNILTGVVLFACAYEIVALA 88

[Close]

BLAST of CSPI01G01680 vs. TrEMBL
Match: A0A0A0LUC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005670 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.1e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60
          MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR
Sbjct: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 98
          LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
Sbjct: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 97

[Close]

BLAST of CSPI01G01680 vs. TrEMBL
Match: D7SHW9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07810 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-32
Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LNK+T  SHFRS SQ   D  SLSRRGFHVEPG REKALLA++P L+RF+SHK+ V
Sbjct: 1  MAFLLNKATALSHFRSHSQKTEDSFSLSRRGFHVEPGPREKALLADNPSLKRFKSHKRNV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQA 95
           RLKRVGDVLTIVVVAGCCYEIYVKA MREEAR+QA
Sbjct: 61 WRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARKQA 96

[Close]

BLAST of CSPI01G01680 vs. TrEMBL
Match: A0A061FTE5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011992 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 8.1e-31
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 1


Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSR--RGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
           MAFFL KS+LA+HFRS  Q    SL+   R  HVEPG RE+ALLAEDP LRRF+S+KK+V
Sbjct: 1   MAFFLKKSSLANHFRSSYQKTEGSLAAPSRALHVEPGARERALLAEDPSLRRFKSYKKSV 60

Query: 61  SRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS 101
            R+KR+GDVLT+VVVAGCCYEIYVKA MREEAR QAK   GS
Sbjct: 61  WRVKRIGDVLTVVVVAGCCYEIYVKAVMREEARNQAKAAGGS 102

[Close]

BLAST of CSPI01G01680 vs. TrEMBL
Match: A9P9R2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-30
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 1


Query: 6  NKSTLASHFRSQSQVDPS-SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRV 65
          N ST+ SH+RSQSQ   + SLSRRGFHVEPG RE+ALLAEDP L+RF+SHKK+V RLKR 
Sbjct: 7  NYSTITSHYRSQSQTQGAFSLSRRGFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRF 66

Query: 66 GDVLTIVVVAGCCYEIYVKATMREEARRQAK 96
          GDVLT+VVVAGCCYEIYVK  MREEAR+QAK
Sbjct: 67 GDVLTLVVVAGCCYEIYVKTVMREEARKQAK 97

[Close]

BLAST of CSPI01G01680 vs. TrEMBL
Match: A9PJS2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-30
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 1


Query: 6  NKSTLASHFRSQSQVDPS-SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRV 65
          N ST+ SH+RSQSQ   + SLSRRGFHVEPG RE+ALLAEDP L+RF+SHKK+V RLKR 
Sbjct: 7  NYSTITSHYRSQSQTQGAFSLSRRGFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRF 66

Query: 66 GDVLTIVVVAGCCYEIYVKATMREEARRQAK 96
          GDVLT+VVVAGCCYEIYVK  MREEAR+QAK
Sbjct: 67 GDVLTLVVVAGCCYEIYVKTVMREEARKQAK 97

[Close]

BLAST of CSPI01G01680 vs. TAIR10
Match: AT5G62575.2 (AT5G62575.2 unknown protein)

HSP 1 Score: 133.3 bits (334), Expect = 8.6e-32
Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKA 60
          MAF LN ++++SH RS S     D  S+SRRGFH+EPGTREKALLAED  L+RF+SHKK+
Sbjct: 1  MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61 VSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT 97
          V +LKR+GDVLT+VVVAGCCYEIYVKA M++EA    K+
Sbjct: 61 VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKS 99

[Close]

BLAST of CSPI01G01680 vs. TAIR10
Match: AT3G47833.1 (AT3G47833.1 unknown protein)

HSP 1 Score: 117.5 bits (293), Expect = 4.9e-27
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN S ++SH RS SQ    +L  SRRGFHVE G REKALLAED  LRRF+SHKK V
Sbjct: 1  MAFLLNTS-ISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR 92
           RLKR+GDVLT+VVVAGCCYEIY +  MR+EA+
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQ 91

[Close]

BLAST of CSPI01G01680 vs. NCBI nr
Match: gi|449440710|ref|XP_004138127.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial [Cucumis sativus])

HSP 1 Score: 200.7 bits (509), Expect = 1.2e-48
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1


Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60
           MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 102
           LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST
Sbjct: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 101

[Close]

BLAST of CSPI01G01680 vs. NCBI nr
Match: gi|700208510|gb|KGN63606.1| (hypothetical protein Csa_1G005670 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-46
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60
          MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR
Sbjct: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 98
          LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
Sbjct: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 97

[Close]

BLAST of CSPI01G01680 vs. NCBI nr
Match: gi|659105547|ref|XP_008453123.1| (PREDICTED: uncharacterized protein LOC103493932 [Cucumis melo])

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-42
Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 1


Query: 1   MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAFFLNKSTLASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 61  RLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 102
           RLK  GDVLTIVV+AGCCYEIYVKATMR+EA RQAKTGS ST
Sbjct: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEA-RQAKTGSEST 101

[Close]

BLAST of CSPI01G01680 vs. NCBI nr
Match: gi|802652520|ref|XP_012080126.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X2 [Jatropha curcas])

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-34
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQVDPS-SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
          MAF LN ST++SHFRSQSQ   S SLSRRGFHVEPG REKALLAEDP L+RF+SHKK+V 
Sbjct: 1  MAFLLNNSTISSHFRSQSQTQDSLSLSRRGFHVEPGVREKALLAEDPVLKRFKSHKKSVW 60

Query: 61 RLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQ 94
          RLKRVGDVLTIVVVAGCCYEIYVKA MREEARR+
Sbjct: 61 RLKRVGDVLTIVVVAGCCYEIYVKAVMREEARRK 94

[Close]

BLAST of CSPI01G01680 vs. NCBI nr
Match: gi|802652517|ref|XP_012080125.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas])

HSP 1 Score: 152.1 bits (383), Expect = 5.1e-34
Identity = 78/95 (82.11%), Postives = 84/95 (88.42%), Query Frame = 1


Query: 1  MAFFLNKSTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN ST++SHFRSQSQ   D  SLSRRGFHVEPG REKALLAEDP L+RF+SHKK+V
Sbjct: 1  MAFLLNNSTISSHFRSQSQKTQDSLSLSRRGFHVEPGVREKALLAEDPVLKRFKSHKKSV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQ 94
           RLKRVGDVLTIVVVAGCCYEIYVKA MREEARR+
Sbjct: 61 WRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARRK 95

The following BLAST results are available for this feature:

BLAST of CSPI01G01680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SDH7B_ARATH	1.5e-30	65.66	Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana GN=SDH...	[more]
SDH7A_ARATH	8.6e-26	68.82	Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana GN=SDH...	[more]
SDH7_ORYSJ	1.2e-11	48.15	Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica...	[more]

BLAST of CSPI01G01680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUC0_CUCSA	1.1e-46	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005670 PE=4 SV=1	[more]
D7SHW9_VITVI	5.6e-32	78.13	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07810 PE=4 SV=...	[more]
A0A061FTE5_THECC	8.1e-31	70.59	Uncharacterized protein OS=Theobroma cacao GN=TCM_011992 PE=4 SV=1	[more]
A9P9R2_POPTR	1.8e-30	76.92	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
A9PJS2_9ROSI	1.8e-30	76.92	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]

BLAST of CSPI01G01680 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62575.2	8.6e-32	65.66	unknown protein	[more]
AT3G47833.1	4.9e-27	68.82	unknown protein	[more]

BLAST of CSPI01G01680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440710\|ref\|XP_004138127.1\|	1.2e-48	100.00	PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial [Cucumis sativus]	[more]
gi\|700208510\|gb\|KGN63606.1\|	1.5e-46	100.00	hypothetical protein Csa_1G005670 [Cucumis sativus]	[more]
gi\|659105547\|ref\|XP_008453123.1\|	1.3e-42	93.14	PREDICTED: uncharacterized protein LOC103493932 [Cucumis melo]	[more]
gi\|802652520\|ref\|XP_012080126.1\|	2.3e-34	82.98	PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X2 [Ja...	[more]
gi\|802652517\|ref\|XP_012080125.1\|	5.1e-34	82.11	PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Ja...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function	GO:0008483	transaminase activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005516	calmodulin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G01680.1	CSPI01G01680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36041	FAMILY NOT NAMED	coord: 2..98 score: 7.6
None	No IPR available	PANTHER	PTHR36041:SF1	SUBFAMILY NOT NAMED	coord: 2..98 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G01680	Cla019169	Watermelon (97103) v1	cpiwmB099
CSPI01G01680	Csa1G005670	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G01680	MELO3C017115	Melon (DHL92) v3.5.1	cpimeB055
CSPI01G01680	ClCG06G016770	Watermelon (Charleston Gray)	cpiwcgB083
CSPI01G01680	Lsi06G015270	Bottle gourd (USVL1VR-Ls)	cpilsiB070
CSPI01G01680	MELO3C017115.2	Melon (DHL92) v3.6.1	cpimedB049
CSPI01G01680	CsaV3_1G001750	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G01680	Cla97C06G126390	Watermelon (97103) v2	cpiwmbB079
CSPI01G01680	Bhi02G000310	Wax gourd	cpiwgoB098
CSPI01G01680	Cucsa.197150	Cucumber (Gy14) v1	cgycpiB310
CSPI01G01680	CmoCh11G001150	Cucurbita moschata (Rifu)	cmocpiB079
CSPI01G01680	CmoCh10G001530	Cucurbita moschata (Rifu)	cmocpiB040
CSPI01G01680	Cp4.1LG04g15390	Cucurbita pepo (Zucchini)	cpecpiB656
CSPI01G01680	Cp4.1LG18g08230	Cucurbita pepo (Zucchini)	cpecpiB361
CSPI01G01680	CsGy1G001710	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G01680	Carg18148	Silver-seed gourd	carcpiB0645
CSPI01G01680	Carg10369	Silver-seed gourd	carcpiB0396

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G01680	Cucurbita moschata (Rifu)	cmocpiB197
CSPI01G01680	Cucurbita moschata (Rifu)	cmocpiB225
CSPI01G01680	Cucurbita moschata (Rifu)	cmocpiB393
CSPI01G01680	Cucurbita moschata (Rifu)	cmocpiB687
CSPI01G01680	Cucumber (Chinese Long) v2	cpicuB008
CSPI01G01680	Cucumber (Chinese Long) v2	cpicuB037
CSPI01G01680	Melon (DHL92) v3.5.1	cpimeB005
CSPI01G01680	Melon (DHL92) v3.5.1	cpimeB015
CSPI01G01680	Watermelon (Charleston Gray)	cpiwcgB002
CSPI01G01680	Watermelon (Charleston Gray)	cpiwcgB005
CSPI01G01680	Watermelon (Charleston Gray)	cpiwcgB018
CSPI01G01680	Watermelon (Charleston Gray)	cpiwcgB066
CSPI01G01680	Watermelon (97103) v1	cpiwmB002
CSPI01G01680	Watermelon (97103) v1	cpiwmB005
CSPI01G01680	Watermelon (97103) v1	cpiwmB039
CSPI01G01680	Watermelon (97103) v1	cpiwmB058
CSPI01G01680	Cucurbita pepo (Zucchini)	cpecpiB020
CSPI01G01680	Cucurbita pepo (Zucchini)	cpecpiB522
CSPI01G01680	Bottle gourd (USVL1VR-Ls)	cpilsiB035
CSPI01G01680	Bottle gourd (USVL1VR-Ls)	cpilsiB047
CSPI01G01680	Melon (DHL92) v3.6.1	cpimedB005
CSPI01G01680	Melon (DHL92) v3.6.1	cpimedB014
CSPI01G01680	Melon (DHL92) v3.6.1	cpimedB059
CSPI01G01680	Cucumber (Gy14) v2	cgybcpiB010
CSPI01G01680	Cucumber (Gy14) v2	cgybcpiB099
CSPI01G01680	Cucumber (Gy14) v2	cgybcpiB204
CSPI01G01680	Silver-seed gourd	carcpiB0532
CSPI01G01680	Silver-seed gourd	carcpiB1042
CSPI01G01680	Cucumber (Chinese Long) v3	cpicucB013
CSPI01G01680	Cucumber (Chinese Long) v3	cpicucB034
CSPI01G01680	Cucumber (Chinese Long) v3	cpicucB044
CSPI01G01680	Watermelon (97103) v2	cpiwmbB004
CSPI01G01680	Watermelon (97103) v2	cpiwmbB063
CSPI01G01680	Watermelon (97103) v2	cpiwmbB091
CSPI01G01680	Wax gourd	cpiwgoB009
CSPI01G01680	Wax gourd	cpiwgoB071
CSPI01G01680	Wild cucumber (PI 183967)	cpicpiB002
CSPI01G01680	Wild cucumber (PI 183967)	cpicpiB020
CSPI01G01680	Wild cucumber (PI 183967)	cpicpiB029
CSPI01G01680	Cucumber (Gy14) v1	cgycpiB108
CSPI01G01680	Cucumber (Gy14) v1	cgycpiB427
CSPI01G01680	Cucumber (Gy14) v1	cgycpiB501
CSPI01G01680	Cucurbita maxima (Rimu)	cmacpiB049
CSPI01G01680	Cucurbita maxima (Rimu)	cmacpiB085
CSPI01G01680	Cucurbita maxima (Rimu)	cmacpiB211
CSPI01G01680	Cucurbita maxima (Rimu)	cmacpiB237
CSPI01G01680	Cucurbita maxima (Rimu)	cmacpiB405
CSPI01G01680	Cucurbita maxima (Rimu)	cmacpiB693