Cucsa.197150 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.197150
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionSuccinate dehydrogenase subunit 7, mitochondrial
Locationscaffold01357 : 648310 .. 652440 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTTTCAAACTTCTCCCTTCTTCCTTCTCGCATTTCCTACTCTTCAACAATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTTCTTTCTCCCTCAATCCCTTCTTTCTTTATCTCTTCGTTCAATCTTTTCACCTTTTGGCCCATCCACAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTGTAAGCATATCTATCTATCTTCTTATTTTCCATCTTTAATTGTTATTCTACCTGTTTATTGCATCGGTTTGGATATTTAATTAATTCCTTGTTTACCTCATACTAGCTCCATTAAGTTGATTGATCTCTCGTATGTATTTGAATTTTTCCATGTCAGTATAGATGGAACTTTTTCGAAGCTGTTCAGATCGAACTGCTTGAGCTTCTACATTTAGGTTCATGAAATTGACGGCTGCTGTTTTCTACATTAATCTGTTACGATGCTATGGCATGAAACCTTTGTGAAATTTTTTTTCTTTTATTGGTTGTGAATATTAAAGGGTTGATTTGCATGCGTGTTCTCGAACTTTGCAACTATACATTCCACACCGATACTTGGAAATTGGAACTATTTTAGAAAATATATATTCCCTTTCATTTCGCGAAGGATTTTGCTATACATGTGGATAGGTTAACATGTCTACCAAAATTTTGGTTCATCTCTTGTATTTTGTTGATGCACTTTTGTTGCTGTGTATGTGATTGCAATGACTTATTGGCATTGAATTTTATTATGTTGAATGTCTGGCAGTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTGCAGGTATTGGCCCTTTTTTCTTTTAATAAATAAAATATGTTTCTCTTTGTCCCATGGGGTTCTTGCTCTGCACTTTTTGCCATTATAGCTACACATGTGATTGGTGTGTGTGTGGATGAAACTTTTGGATGGTGTATTTCCTTATTGTGTTACAAGAATGTCACATCTTTACTTGCTCCTTAGAGGTGAAAATTAGCTCTAGCCATTTTGGTTCGGTTAATTCTTAGTATTGTATTAGCTGAAAAGTATCTTAGGTGAACTCAGAAGGTAGAAATAATACCTACTGAAGTGGAAGAAAGGGGCAGCAGCTTGTATGGGGTGTTTTTAGTAGAAACGTTGGGTTTCAATGACTGCAAAAGAAGAAACTTGAGACTCAAATTTAGAACAAAGTAGTGTTTAGTTAAATAAGTGCCAATGTTTAAGTTGATCGAAATTTTGGATTTATCTTATAAGAACTTTTACTGATATGTGAATTTTGGAGATGGTATTTCTTTTAGTACTAACGATCATTTAAACATGCCACTCCGTTGACCAATTCAGGTACAGGTTTTCTTAATTTAGGATAGTAGTGACTGCCAGATTAATATTAGTTTCATTTACAGTTTAGTGGCCTCAACCTTGAGTTCTATCTAAGGATGTTATTAGGTGATACAGCTAGCTAATAACAGTTCAATTGAAAGTCTAAGTAGCTATTTTTCCTGTTTATTTAAGTATCATGATGACACTTGGTCGTAGACAATAGATCAACTGGTAAAGGCACATACAAGTTACTTATTTTCTTTGCAATTTTGATTCTCTTTACAATAAAAAGTAGAAGAGGAGGAATACAATCAAATTCTTCAAGATATTATATAACAAACAGGATAATAATGTAGTATGACTCTCCTTGAAGAGAACAGCAAAACAAAACACTCTTCCAGACATTGTTCATATGAGCTTTTCTGTCTTCAAAAGATTCTTCTCGTTCTTTCTTTTTAGTTCCCTTAATTCTCAACAAAAACTGGAATAACTATACTGAATATGATCTTGGTTGCCAGTGATGCCAATTGCCGCCATATAATTTGGGGTCCTTAATAATTCTGCAGAAGCCCAATCAGGTTAAAGATTTTCGGCTACTTCCATTGAAGTGGTCAAGAGACCAACTTCTAGGGACCTGGTAATCTAGTTCTCCAATGAGCTTTCACCACCTTGAGGTTTCATGTGTGTGCTCGTGGACACTCATATATATATGAAAATATGTCTGTCAAGCAGGTCATGAGTGTTGATTGATCTGCGAAGCAGTAAGAAAATGAAGATTGAAGACCACCTCTAAGCTGCACATCATATTCACCAACTTATTAGGCAATTCTGCGTTTCCATAGTTTGATTCAGCAATATTGCATTAGTTGAACTTGATATTAGCTTCCAGCCTCCATATGCTAGAGCCTAGTGCCCTCATCTCCAAAAACATTCGTAAGGATGCCAATAATGCTTCTCTATTATTCAGATTTCTCCAAAAGTGTCAATTCAAACTTGTAGAAAACGAACAGTTTAAGTTTAACGGTAAGTCCAGTGAAGCGTGGGCAATATCTTGTTTGCTGTGCCTAAGTCAACTGAGCTCGTACACTAACATTTGATCTCCCCACAATCTTTATTTCCATGACTAGAATGTGGACAGTGAAGCTTTTCTCTCTCTCCAGTTTTGAGTGCCTCACATTTGCACTAGGTTGCTGTTAGGAACCAAGGTAGTTATGAGATGCCTTTGTATTGTAGGAACCAAGGTAGGTATGCGATGCTTTGTGTCCCCATCAGTAGAATGGGATGACCAATATGGTATTCAAGTGGCTTGGCTCTCCCATCTCAATAGCTGGATTTTGGGATGTAGTTCTCTAAGGTGCTTAAGTACCTAACAATAGTATCAGAGCTGGTTGTCAATGTTTCAGAGTGGAACCGGTGGGACATCGACTTTCCGGGAATGGGTACTGTTAGAAATCAAGGTAGTTATGGGATTACCAATATGGTACTTAAGCGGCTTGGTTCTCCCACCCCAATTGTTGACTTGGGGTGTGGTTCTCCAAGGTGCTTAAGGTACCTAACAGCTGCCTGATGTGTGAATTGGCATGATGTCGAAACATCTTTGATTTTTTTCCTCTTTTGATGTTCTTTGTTCTGAGCTCTCCCGGTCATTAGAAGGTTCTTTTTTTCTTCCTTATTTTAATTTCTGCAATGTTACCATTATCTTTGTTTTTATTTCAAGAAATAAAAACATTCATTATCAAAGGGATATACAAAAAGATGGGGGAAATGGGATATATCCACACATCAAGTATAGGAGGGTAAAATTTTCAATATATGACGGTACTTCCAGTTTTTCCTGAAAATATTTTGGTTAGGTGGTTAAGTGAAGCTTGGGAGTGAAAGCGTCAAGATCTGTTTTGTGGGCCACTTGTTTAGAAAGAAATGACACAATTTCTAACACAACATGCATAGCATTTTAAGAGATGGAAAATTTCTCTGGTCAAAATCTTACAAATCATTCGTTAATTTATCCTCTTTCGTCAAGGGTATTCTTTTGTTCTTTTATCTACCCATGTTCGATGGTAGGAAGGATATCTTTTAAAGGATGTTTGGCAACTTATAACTCAATTCACTAGCTTCATTAGTGTTCGTTATTGAAGTTTGTACTATATCTTCTCTTCTAGACTAAACAACTCTACACTCTAAACATGGATTTCATAACTTCAATATGTTAACTCTCAACTTACAACTCAACTCAACCCACCAAACACCTCCTTAGTATCTCTTCCATTCCTTTGAATGACATTTTTACATCTTTTATTTCCCCATCCCCAAAATAAACAAATCTTTGATCTCTATCATCATATTTTTCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACATGATGGAGTTTGTATCCATTTGGCCAATTAAAATGTCTGCCAAAAAGTCCTTAATGCTTTCATCTGTGTGCTAAAATAAAGATCGAGTTTTTTTTTTTTTTCTTGTAGGGTTTTAATCATCAATAATTTCTTTTTGTACCCTTCATTTCATAACATCTCAAGGGGATATCAGAGTACGTTTACATCGTTGTGAACACGTTTTATGAAGCTTACAACATTGCCAGCTTCAAAGCTTGAAATAGAACTTACATGGTCGATTTGTTGGTTT

mRNA sequence

AGGTTTCAAACTTCTCCCTTCTTCCTTCTCGCATTTCCTACTCTTCAACAATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACATGATGGAGTTTGTATCCATTTGGCCAATTAAAATGTCTGCCAAAAAGTCCTTAATGCTTTCATCTGTGTGCTAAAATAAAGATCGAGTTTTTTTTTTTTTTCTTGTAGGGTTTTAATCATCAATAATTTCTTTTTGTACCCTTCATTTCATAACATCTCAAGGGGATATCAGAGTACGTTTACATCGTTGTGAACACGTTTTATGAAGCTTACAACATTGCCAGCTTCAAAGCTTGAAATAGAACTTACATGGTCGATTTGTTGGTTT

Coding sequence (CDS)

ATGGCGTTTTTCCTCAACAAATCCACTCTTGCCTCTCATTTCCGATCTCAATCTCAGGTGGATCCTTCCTCACTTTCTCGACGTGGATTCCACGTCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTGTCTTAGGCGGTTCAGATCACATAAGAAAGCTGTCTCTCGACTCAAAAGAGTTGGAGATGTTTTGACAATTGTGGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGACGACAGGCAAAGACAGGTAGCGGAAGTACATGA

Protein sequence

MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST*
Homology
[Close]
BLAST of Cucsa.197150 vs. Swiss-Prot
Match: SDH7B_ARATH (Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana GN=SDH7B PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.0e-31
Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKA 60
          MAF LN ++++SH RS S     D  S+SRRGFH+EPGTREKALLAED  L+RF+SHKK+
Sbjct: 1  MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61 VSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT 97
          V +LKR+GDVLT+VVVAGCCYEIYVKA M++EA    K+
Sbjct: 61 VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKS 99

[Close]
BLAST of Cucsa.197150 vs. Swiss-Prot
Match: SDH7A_ARATH (Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana GN=SDH7A PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 6.7e-26
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN S ++SH RS SQ    +L  SRRGFHVE G REKALLAED  LRRF+SHKK V
Sbjct: 1  MAFLLNTS-ISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR 92
           RLKR+GDVLT+VVVAGCCYEIY +  MR+EA+
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQ 91

[Close]
BLAST of Cucsa.197150 vs. Swiss-Prot
Match: SDH7_ORYSJ (Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH7 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 9.4e-12
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1 

Query: 8  STLASHFRSQSQVDPS----SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKR 67
          S L S  RS     P+       RRGFHVE G REKALL ED  L+RF+S+K +V ++ +
Sbjct: 8  SALRSRLRSPQPQAPALPHLQPPRRGFHVELGAREKALLEEDTALKRFKSYKNSVKQVSK 67

Query: 68 VGDVLTIVVVAGCCYEIYVKA 85
          VG++LT VV+  C YEI   A
Sbjct: 68 VGNILTGVVLFACAYEIVALA 88

[Close]
BLAST of Cucsa.197150 vs. TrEMBL
Match: A0A0A0LUC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005670 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.3e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60
          MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR
Sbjct: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 98
          LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
Sbjct: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 97

[Close]
BLAST of Cucsa.197150 vs. TrEMBL
Match: D7SHW9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07810 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-32
Identity = 75/96 (78.12%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LNK+T  SHFRS SQ   D  SLSRRGFHVEPG REKALLA++P L+RF+SHK+ V
Sbjct: 1  MAFLLNKATALSHFRSHSQKTEDSFSLSRRGFHVEPGPREKALLADNPSLKRFKSHKRNV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQA 95
           RLKRVGDVLTIVVVAGCCYEIYVKA MREEAR+QA
Sbjct: 61 WRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARKQA 96

[Close]
BLAST of Cucsa.197150 vs. TrEMBL
Match: A0A061FTE5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011992 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.7e-31
Identity = 72/102 (70.59%), Postives = 82/102 (80.39%), Query Frame = 1 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSR--RGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
           MAFFL KS+LA+HFRS  Q    SL+   R  HVEPG RE+ALLAEDP LRRF+S+KK+V
Sbjct: 1   MAFFLKKSSLANHFRSSYQKTEGSLAAPSRALHVEPGARERALLAEDPSLRRFKSYKKSV 60

Query: 61  SRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGS 101
            R+KR+GDVLT+VVVAGCCYEIYVKA MREEAR QAK   GS
Sbjct: 61  WRVKRIGDVLTVVVVAGCCYEIYVKAVMREEARNQAKAAGGS 102

[Close]
BLAST of Cucsa.197150 vs. TrEMBL
Match: A9P9R2_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-30
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 1 

Query: 6  NKSTLASHFRSQSQVDPS-SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRV 65
          N ST+ SH+RSQSQ   + SLSRRGFHVEPG RE+ALLAEDP L+RF+SHKK+V RLKR 
Sbjct: 7  NYSTITSHYRSQSQTQGAFSLSRRGFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRF 66

Query: 66 GDVLTIVVVAGCCYEIYVKATMREEARRQAK 96
          GDVLT+VVVAGCCYEIYVK  MREEAR+QAK
Sbjct: 67 GDVLTLVVVAGCCYEIYVKTVMREEARKQAK 97

[Close]
BLAST of Cucsa.197150 vs. TrEMBL
Match: A9PJS2_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-30
Identity = 70/91 (76.92%), Postives = 79/91 (86.81%), Query Frame = 1 

Query: 6  NKSTLASHFRSQSQVDPS-SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRV 65
          N ST+ SH+RSQSQ   + SLSRRGFHVEPG RE+ALLAEDP L+RF+SHKK+V RLKR 
Sbjct: 7  NYSTITSHYRSQSQTQGAFSLSRRGFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRF 66

Query: 66 GDVLTIVVVAGCCYEIYVKATMREEARRQAK 96
          GDVLT+VVVAGCCYEIYVK  MREEAR+QAK
Sbjct: 67 GDVLTLVVVAGCCYEIYVKTVMREEARKQAK 97

[Close]
BLAST of Cucsa.197150 vs. TAIR10
Match: AT5G62575.2 (AT5G62575.2 unknown protein)

HSP 1 Score: 134.0 bits (336), Expect = 5.1e-32
Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQV---DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKA 60
          MAF LN ++++SH RS S     D  S+SRRGFH+EPGTREKALLAED  L+RF+SHKK+
Sbjct: 1  MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 61 VSRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKT 97
          V +LKR+GDVLT+VVVAGCCYEIYVKA M++EA    K+
Sbjct: 61 VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKS 99

[Close]
BLAST of Cucsa.197150 vs. TAIR10
Match: AT3G47833.1 (AT3G47833.1 unknown protein)

HSP 1 Score: 117.9 bits (294), Expect = 3.8e-27
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQVDPSSL--SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN S ++SH RS SQ    +L  SRRGFHVE G REKALLAED  LRRF+SHKK V
Sbjct: 1  MAFLLNTS-ISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEAR 92
           RLKR+GDVLT+VVVAGCCYEIY +  MR+EA+
Sbjct: 61 HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQ 91

[Close]
BLAST of Cucsa.197150 vs. NCBI nr
Match: gi|449440710|ref|XP_004138127.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 5.6e-49
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60
           MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 102
           LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST
Sbjct: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 101

[Close]
BLAST of Cucsa.197150 vs. NCBI nr
Match: gi|700208510|gb|KGN63606.1| (hypothetical protein Csa_1G005670 [Cucumis sativus])

HSP 1 Score: 194.5 bits (493), Expect = 9.0e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60
          MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR
Sbjct: 1  MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 98
          LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG
Sbjct: 61 LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTG 97

[Close]
BLAST of Cucsa.197150 vs. NCBI nr
Match: gi|659105547|ref|XP_008453123.1| (PREDICTED: uncharacterized protein LOC103493932 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 6.0e-43
Identity = 95/102 (93.14%), Postives = 97/102 (95.10%), Query Frame = 1 

Query: 1   MAFFLNKSTLASHFRSQSQVDPSSL-SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
           MAFFLNKSTLASHFRSQSQVDPSSL SRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 61  RLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 102
           RLK  GDVLTIVV+AGCCYEIYVKATMR+EA RQAKTGS ST
Sbjct: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEA-RQAKTGSEST 101

[Close]
BLAST of Cucsa.197150 vs. NCBI nr
Match: gi|802652520|ref|XP_012080126.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X2 [Jatropha curcas])

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-34
Identity = 78/94 (82.98%), Postives = 84/94 (89.36%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQVDPS-SLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60
          MAF LN ST++SHFRSQSQ   S SLSRRGFHVEPG REKALLAEDP L+RF+SHKK+V 
Sbjct: 1  MAFLLNNSTISSHFRSQSQTQDSLSLSRRGFHVEPGVREKALLAEDPVLKRFKSHKKSVW 60

Query: 61 RLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQ 94
          RLKRVGDVLTIVVVAGCCYEIYVKA MREEARR+
Sbjct: 61 RLKRVGDVLTIVVVAGCCYEIYVKAVMREEARRK 94

[Close]
BLAST of Cucsa.197150 vs. NCBI nr
Match: gi|802652517|ref|XP_012080125.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas])

HSP 1 Score: 152.5 bits (384), Expect = 3.9e-34
Identity = 78/95 (82.11%), Postives = 84/95 (88.42%), Query Frame = 1 

Query: 1  MAFFLNKSTLASHFRSQSQV--DPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAV 60
          MAF LN ST++SHFRSQSQ   D  SLSRRGFHVEPG REKALLAEDP L+RF+SHKK+V
Sbjct: 1  MAFLLNNSTISSHFRSQSQKTQDSLSLSRRGFHVEPGVREKALLAEDPVLKRFKSHKKSV 60

Query: 61 SRLKRVGDVLTIVVVAGCCYEIYVKATMREEARRQ 94
           RLKRVGDVLTIVVVAGCCYEIYVKA MREEARR+
Sbjct: 61 WRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARRK 95

The following BLAST results are available for this feature:
BLAST of Cucsa.197150 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDH7B_ARATH9.0e-3165.66Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana GN=SDH... [more]
SDH7A_ARATH6.7e-2668.82Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana GN=SDH... [more]
SDH7_ORYSJ9.4e-1248.15Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of Cucsa.197150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUC0_CUCSA6.3e-47100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005670 PE=4 SV=1[more]
D7SHW9_VITVI3.3e-3278.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07810 PE=4 SV=... [more]
A0A061FTE5_THECC3.7e-3170.59Uncharacterized protein OS=Theobroma cacao GN=TCM_011992 PE=4 SV=1[more]
A9P9R2_POPTR1.4e-3076.92Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1[more]
A9PJS2_9ROSI1.4e-3076.92Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
BLAST of Cucsa.197150 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G62575.25.1e-3265.66 unknown protein[more]
AT3G47833.13.8e-2768.82 unknown protein[more]
BLAST of Cucsa.197150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440710|ref|XP_004138127.1|5.6e-49100.00PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial [Cucumis sativus][more]
gi|700208510|gb|KGN63606.1|9.0e-47100.00hypothetical protein Csa_1G005670 [Cucumis sativus][more]
gi|659105547|ref|XP_008453123.1|6.0e-4393.14PREDICTED: uncharacterized protein LOC103493932 [Cucumis melo][more]
gi|802652520|ref|XP_012080126.1|1.8e-3482.98PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X2 [Ja... [more]
gi|802652517|ref|XP_012080125.1|3.9e-3482.11PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Ja... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function GO:0008483 transaminase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.197150.1Cucsa.197150.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36041FAMILY NOT NAMEDcoord: 2..98
score: 7.6
NoneNo IPR availablePANTHERPTHR36041:SF1SUBFAMILY NOT NAMEDcoord: 2..98
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.197150Cla019169Watermelon (97103) v1cgywmB390
Cucsa.197150Csa1G005670Cucumber (Chinese Long) v2cgycuB299
Cucsa.197150MELO3C017115Melon (DHL92) v3.5.1cgymeB364
Cucsa.197150ClCG06G016770Watermelon (Charleston Gray)cgywcgB368
Cucsa.197150CSPI01G01680Wild cucumber (PI 183967)cgycpiB310
Cucsa.197150CmoCh11G001150Cucurbita moschata (Rifu)cgycmoB0578
Cucsa.197150CmoCh10G001530Cucurbita moschata (Rifu)cgycmoB0575
Cucsa.197150Lsi06G015270Bottle gourd (USVL1VR-Ls)cgylsiB342
Cucsa.197150Cp4.1LG04g15390Cucurbita pepo (Zucchini)cgycpeB0564
Cucsa.197150Cp4.1LG18g08230Cucurbita pepo (Zucchini)cgycpeB0556
Cucsa.197150MELO3C017115.2Melon (DHL92) v3.6.1cgymedB359
Cucsa.197150CsaV3_1G001750Cucumber (Chinese Long) v3cgycucB314
Cucsa.197150Cla97C06G126390Watermelon (97103) v2cgywmbB370
Cucsa.197150Bhi02G000310Wax gourdcgywgoB417
Cucsa.197150Carg10369Silver-seed gourdcarcgyB0423
Cucsa.197150Carg18148Silver-seed gourdcarcgyB0689
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.197150Watermelon (97103) v2cgywmbB362
Cucsa.197150Watermelon (97103) v2cgywmbB366
Cucsa.197150Watermelon (97103) v2cgywmbB371
Cucsa.197150Wax gourdcgywgoB405
Cucsa.197150Wax gourdcgywgoB412
Cucsa.197150Cucumber (Gy14) v1cgycgyB038
Cucsa.197150Cucumber (Gy14) v1cgycgyB113
Cucsa.197150Cucumber (Gy14) v1cgycgyB115
Cucsa.197150Cucurbita maxima (Rimu)cgycmaB0573
Cucsa.197150Cucurbita maxima (Rimu)cgycmaB0576
Cucsa.197150Cucurbita maxima (Rimu)cgycmaB0582
Cucsa.197150Cucurbita maxima (Rimu)cgycmaB0586
Cucsa.197150Cucurbita maxima (Rimu)cgycmaB0588
Cucsa.197150Cucurbita maxima (Rimu)cgycmaB0592
Cucsa.197150Cucurbita moschata (Rifu)cgycmoB0582
Cucsa.197150Cucurbita moschata (Rifu)cgycmoB0586
Cucsa.197150Cucurbita moschata (Rifu)cgycmoB0588
Cucsa.197150Cucurbita moschata (Rifu)cgycmoB0591
Cucsa.197150Wild cucumber (PI 183967)cgycpiB312
Cucsa.197150Wild cucumber (PI 183967)cgycpiB314
Cucsa.197150Wild cucumber (PI 183967)cgycpiB315
Cucsa.197150Cucumber (Chinese Long) v2cgycuB301
Cucsa.197150Cucumber (Chinese Long) v2cgycuB303
Cucsa.197150Melon (DHL92) v3.5.1cgymeB357
Cucsa.197150Melon (DHL92) v3.5.1cgymeB359
Cucsa.197150Watermelon (Charleston Gray)cgywcgB357
Cucsa.197150Watermelon (Charleston Gray)cgywcgB359
Cucsa.197150Watermelon (Charleston Gray)cgywcgB360
Cucsa.197150Watermelon (Charleston Gray)cgywcgB364
Cucsa.197150Watermelon (97103) v1cgywmB379
Cucsa.197150Watermelon (97103) v1cgywmB381
Cucsa.197150Watermelon (97103) v1cgywmB382
Cucsa.197150Watermelon (97103) v1cgywmB385
Cucsa.197150Cucurbita pepo (Zucchini)cgycpeB0553
Cucsa.197150Cucurbita pepo (Zucchini)cgycpeB0559
Cucsa.197150Bottle gourd (USVL1VR-Ls)cgylsiB335
Cucsa.197150Bottle gourd (USVL1VR-Ls)cgylsiB338
Cucsa.197150Melon (DHL92) v3.6.1cgymedB360
Cucsa.197150Melon (DHL92) v3.6.1cgymedB352
Cucsa.197150Melon (DHL92) v3.6.1cgymedB354
Cucsa.197150Silver-seed gourdcarcgyB0570
Cucsa.197150Silver-seed gourdcarcgyB1123
Cucsa.197150Cucumber (Chinese Long) v3cgycucB316
Cucsa.197150Cucumber (Chinese Long) v3cgycucB318
Cucsa.197150Cucumber (Chinese Long) v3cgycucB319