CmoCh10G001530 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh10G001530
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Succinate dehydrogenase subunit 7B, mitochondrial
Location	Cmo_Chr10 : 703341 .. 706682 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGACCTCACCGTATTTCTTATTAATCTCCCTGTCACCCAATGCTTTTTTTCTTTCTCGCATATTGTGGAACAATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTTCTTTCTCATTCAATCGCCTCTTTGTTTCTCTTTTTTAATCGTTTTTTCGCTCTCTCGCTCAATCTTTTGAGTTTTTGGTTGACGGGTAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACATCGAACCAGGGACTCGTGAAAAGGCTGTAAGCATATCTAACTTCTTGTTATTTTCTATCTTTAATTGCCAGTGTAGTGGTCTATTTCACCGTTTGGACATTTAGTTCCTTATAGCTTACCGCTGCTCCATTAAGTTAATTGATATTTCGCATGATTGTCAATCTAGTTCATTTCGCTTTATCGTTGTTCAATCTTTCGACGCCATTATAGATGGAAGCTTTTCGAATCTGTTCAGATCAAACTGCTTGAACTCCTGTATTTAGGTCCATGAAATTAGAGGGAAGGTTTCCGTGTTGTTTTCTACACTAATCTGTTGCCATGCTATGCCATGAAACCCTGGTGAAATCTGTTAAGTTCCTTATATTGGTGTATAGTGCGGGTTTGCTTTGCATGCGTGTTCTCAAACTCCGCAAGTATAGTTTCCACTCCAATATTGAACTATTTTCGAAAATATTTATTACTTACATTTCACGAAGGACTTTTCAATACTTGGCTCACCTCTTGCATTTTGTTGATGCAGTTTAGTTGCTAAGTATGTGATTGCAATGATTTATTGTTGAATTGAGTTTCACTATGTTGAAATCTGGCAGTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAAAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGTATTAGTCTTTTTTTCATTAATAAAATACTTTTCTCTTTGTCCTGTGGGTCCTAGCTCTGCCATTTACCATTATAGCAACATTGATGTAAACTATGTGCGGTTGAATCTTTTGGATGATGTATGTTTCTATACCGATACAAGTTTGTCAAATTTTTACAAGCTTCTTAGAGGTGAAAATTGGCTTCATACCCTTCGAATGAAAACAAGCATATGGCATATGCTTGTTTTTTTGGTTGATTCTTAGTAATACGTTAGATGAAAAGTATCTTAAACTTAGAAGGCAAAATAATGCTACAGAAATGGAAGATTGGGGTAGCGGCTGTATTGTATGGTTTGTTTTTAGTAGTCTCACCGGGTATCAATGACTGCAAAAGAAGGAACTTGAGATTCAAAAGAAGAACAACGTGGTCTTTGTTCAAATAAACGCTAATGCTTAAGTTGATTGAAATTGTAGACCACCTCTGAACTCCATCATATTCCCCAACTAAACAGGCAACTCTGTGTTTCCAGAGTTCGATACAACAATATTATTAGATTAGTTTTGTTTTTGGGGGTAAAGAATTGGGCTTTCATTGATAAGAAATGGAAGAAAAAGAAAGGGAGCATTAAAAAAAACAGGCCACAAAAAAGGGAGGAGTCCCAACTACTACAAAAAGAGCTCCAATCCAATAAAATCGAGCCAGGATCATAATTACAAAAGAGTGTTGATAGACACCCACAAAGAGGCTTAAATCGAGTTCCCTACCTCTCCTCACTGGATCTTCCAACCTCTCTAAAAATCCTATTATTTCCCTCTAGCCAAATACTCAAAACAATAGCAAAAAAGCTCTTTTGCCGCAACATAAGGCCATGCTCACGAAAGGGCGAACTCAAAAGGACTTCCTTAATCACAGAGAAACAAACTCTCCACACCGAAAGTCCTCAACCATCTAGTCTAAATAGACTGCGCAAAGTTAATAATGCTAGAGCCCTCATCCCCAAAAGAATTCATGTCTTTCGTTTATATTCAACAAGGGCTAACAATGCTTCTCTATCATTCTAAACTTCTCCCAAAATGATAATCCAAATTAGTTGAAAATGAACGTTTTACCTGTTAGTTCAGTGAAGGAGCAATCAATTTTGAGTTCTTCACATGTGCATCGGGCTATGTTAAGTGAATTGGCATGTTGCCAGGAAACGTAATTGATTTCTTTTCTTTTTATTTAAATTTCTACAATGTTACCATCATCTTTTTTTTTATTTTTTATTAAGAAACAAAACATTTATTATCGAAAGGGATATAGAAAAAGATGGGAGAGATGCAATTTATCCACACACCGAGTTTCTGTCCAGCTTGGCCACTGAAAACATCTTTGAACTTTATTATTGGTTCAATTCAATGCCCTCTTACTTTAATTCAATGACCAAGAAGGACGGGCACTTGACTAGGCAGATTTGGAAGACGAGAACTCCTTGTACCCTAGTCTACAAGAACATCAACACTCAAAAAAGTATTTAAAAGGAAAACCCACTCTACGTGCTATACCCCCAAGCATGCCAAAACTAGTCTCTTCTATGAAGAGACCTTTCATAATGTTTTTAATTTTCCAGCTACTTTTCTCTAGCAGATTATTGGTTTCAGTTATGTAATATGTTCAACATAGAACGGTGCTTCCAAAAGGATCCAATTATACTTCCTGAGATTATTTTGGTTTAGTGGTTAAGTGGAAAGCAAAGATTATTGGTAATGAAGGCTTCATGAGCTATTTGTGGGTCATTGGGTTATAAAGAAATGACAGAATTTCAAACCACATTCATAGAAATTCTAGAGAAATTTGAGAGAATGTAAGGCCACAGAGCCTCCCTTTGGTCGAAGTCTTACAAATGTTTTGATAATTTATCTTCTTTCGTCAAGAGGACTCTTTTTCTTCATCTCATCATGCCTGATGGTGGGAAGAATATCTCTTTGTGTATGTTTAGTTCCTTTGGAATGAAATTTTTTCGTCCCGAAGAAAAGAAAAACTTTAATCCTTGTCATTATATTTTTTTTCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGTACATGATGGAATTTGTATCCAGTGACTAATAAAATGTCTCACAAAGGTTTTTAATGCTTTCAGCTAAATAAAGGTTTTGAAGCACCAGTTCTATTTCCCCCATTTCTTGTAGGTTGGTTTTAATCATCAATAATTTCTTCATGATACTTCAATTGGCATGCAAAACCGAGAAGGAACTTCCTTATTCACTCAAATTTCTGTGTGAAATAGATGCCAGGAACTTCCTTATTCACTCAAATTTCTGTGTGAAATAGATGCCAGGAACTTCCTTATTCACTCAAA

mRNA sequence

TTGACCTCACCGTATTTCTTATTAATCTCCCTGTCACCCAATGCTTTTTTTCTTTCTCGCATATTGTGGAACAATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACATCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAAAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGTACATGATGGAATTTGTATCCAGTGACTAATAAAATGTCTCACAAAGGTTTTTAATGCTTTCAGCTAAATAAAGGTTTTGAAGCACCAGTTCTATTTCCCCCATTTCTTGTAGGTTGGTTTTAATCATCAATAATTTCTTCATGATACTTCAATTGGCATGCAAAACCGAGAAGGAACTTCCTTATTCACTCAAATTTCTGTGTGAAATAGATGCCAGGAACTTCCTTATTCACTCAAATTTCTGTGTGAAATAGATGCCAGGAACTTCCTTATTCACTCAAA

Coding sequence (CDS)

ATGCTTTTTTTCTTTCTCGCATATTGTGGAACAATGGCGTTTTTGCTCACCAAAACCTCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACATCGAACCAGGGACTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCGCTCGAATCAAAAAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCAAAGGCAGCTAGCGAAAGTACATGA

Homology

[Close]

BLAST of CmoCh10G001530 vs. Swiss-Prot
Match: SDH7B_ARATH (Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana GN=SDH7B PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.0e-29
Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKG 71
           MAFLL   S++SH RS S     D  S SRRGFHIEPGTREKALLAED +L+RF+SHKK 
Sbjct: 1   MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 72  VARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS 109
           V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Sbjct: 61  VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 100

[Close]

BLAST of CmoCh10G001530 vs. Swiss-Prot
Match: SDH7A_ARATH (Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana GN=SDH7A PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.6e-26
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPSS--PSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGV 71
           MAFLL  TS++SH RS SQ    +   SRRGFH+E G REKALLAED SLRRF+SHKKGV
Sbjct: 1   MAFLLN-TSISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 72  ARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQA 105
            R+K+IGDVLT+VVVAGCCYEIY +  MR+EA+ A
Sbjct: 61  HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQAA 93

[Close]

BLAST of CmoCh10G001530 vs. Swiss-Prot
Match: SDH7_ORYSJ (Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH7 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-12
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 19 TSLASHFRSQSQVDPS----SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVARIKK 78
          ++L S  RS     P+     P RRGFH+E G REKALL ED +L+RF+S+K  V ++ K
Sbjct: 8  SALRSRLRSPQPQAPALPHLQPPRRGFHVELGAREKALLEEDTALKRFKSYKNSVKQVSK 67

Query: 79 IGDVLTIVVVAGCCYEIYVKA 96
          +G++LT VV+  C YEI   A
Sbjct: 68 VGNILTGVVLFACAYEIVALA 88

[Close]

BLAST of CmoCh10G001530 vs. TrEMBL
Match: A0A0A0LUC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005670 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.9e-37
Identity = 82/95 (86.32%), Postives = 89/95 (93.68%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVAR 71
           MAF L K++LASHFRSQSQVDPSS SRRGFH+EPGTREKALLAEDP LRRFRSHKK V+R
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 72  IKKIGDVLTIVVVAGCCYEIYVKATMREEA-RQAK 106
           +K++GDVLTIVVVAGCCYEIYVKATMREEA RQAK
Sbjct: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAK 95

[Close]

BLAST of CmoCh10G001530 vs. TrEMBL
Match: D7SHW9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07810 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.9e-30
Identity = 71/100 (71.00%), Postives = 83/100 (83.00%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQV--DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGV 71
           MAFLL K +  SHFRS SQ   D  S SRRGFH+EPG REKALLA++PSL+RF+SHK+ V
Sbjct: 1   MAFLLNKATALSHFRSHSQKTEDSFSLSRRGFHVEPGPREKALLADNPSLKRFKSHKRNV 60

Query: 72  ARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASE 110
            R+K++GDVLTIVVVAGCCYEIYVKA MREEAR+  AA+E
Sbjct: 61  WRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARKQAAANE 100

[Close]

BLAST of CmoCh10G001530 vs. TrEMBL
Match: V4KNY4_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10005150mg PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.7e-29
Identity = 70/99 (70.71%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQV--DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGV 71
           MAFLL   S++SHFRS SQ   D  S SRRGFHIEPGTREKALLAED +L+RF+SHKKGV
Sbjct: 20  MAFLLNNASISSHFRSSSQKTGDALSLSRRGFHIEPGTREKALLAEDATLKRFKSHKKGV 79

Query: 72  ARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS 109
            R++KIGDVLT+VV+AGCCYEIYVKA M+ EA+ A  +S
Sbjct: 80  HRLRKIGDVLTVVVIAGCCYEIYVKAVMKNEAKAAGKSS 118

[Close]

BLAST of CmoCh10G001530 vs. TrEMBL
Match: M5WEL7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013774mg PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-28
Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKG 71
           MAFLL + S+ SHF+S SQ    D  S SRR FH+EPG REKALLAEDPSL+RF+SHKKG
Sbjct: 1   MAFLL-RNSITSHFQSHSQRAQNDSLSQSRRQFHVEPGPREKALLAEDPSLKRFKSHKKG 60

Query: 72  VARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS 109
           VARIK++GDVLT+VVVA CCYEIYV+A MREEAR+   AS
Sbjct: 61  VARIKRLGDVLTVVVVASCCYEIYVRAVMREEARKQAGAS 99

[Close]

BLAST of CmoCh10G001530 vs. TrEMBL
Match: A0A061FTE5_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011992 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-27
Identity = 73/103 (70.87%), Postives = 82/103 (79.61%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPSS---PSRRGFHIEPGTREKALLAEDPSLRRFRSHKKG 71
           MAF L K+SLA+HFRS  Q    S   PSR   H+EPG RE+ALLAEDPSLRRF+S+KK 
Sbjct: 1   MAFFLKKSSLANHFRSSYQKTEGSLAAPSR-ALHVEPGARERALLAEDPSLRRFKSYKKS 60

Query: 72  VARIKKIGDVLTIVVVAGCCYEIYVKATMREEAR-QAKAASES 111
           V R+K+IGDVLT+VVVAGCCYEIYVKA MREEAR QAKAA  S
Sbjct: 61  VWRVKRIGDVLTVVVVAGCCYEIYVKAVMREEARNQAKAAGGS 102

[Close]

BLAST of CmoCh10G001530 vs. TAIR10
Match: AT5G62575.2 (AT5G62575.2 unknown protein)

HSP 1 Score: 127.9 bits (320), Expect = 4.0e-30
Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQV---DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKG 71
           MAFLL   S++SH RS S     D  S SRRGFHIEPGTREKALLAED +L+RF+SHKK 
Sbjct: 1   MAFLLNNASISSHLRSSSSQKTGDALSISRRGFHIEPGTREKALLAEDSALKRFKSHKKS 60

Query: 72  VARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAAS 109
           V ++K+IGDVLT+VVVAGCCYEIYVKA M++EA  A  +S
Sbjct: 61  VHKLKRIGDVLTVVVVAGCCYEIYVKAVMKKEALAAGKSS 100

[Close]

BLAST of CmoCh10G001530 vs. TAIR10
Match: AT3G47833.1 (AT3G47833.1 unknown protein)

HSP 1 Score: 118.2 bits (295), Expect = 3.1e-27
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPSS--PSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGV 71
           MAFLL  TS++SH RS SQ    +   SRRGFH+E G REKALLAED SLRRF+SHKKGV
Sbjct: 1   MAFLLN-TSISSHLRSSSQKTDGALAQSRRGFHVELGAREKALLAEDASLRRFKSHKKGV 60

Query: 72  ARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQA 105
            R+K+IGDVLT+VVVAGCCYEIY +  MR+EA+ A
Sbjct: 61  HRLKRIGDVLTVVVVAGCCYEIYAR-VMRKEAQAA 93

[Close]

BLAST of CmoCh10G001530 vs. NCBI nr
Match: gi|449440710|ref|XP_004138127.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial [Cucumis sativus])

HSP 1 Score: 165.2 bits (417), Expect = 6.3e-38
Identity = 85/101 (84.16%), Postives = 92/101 (91.09%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVAR 71
           MAF L K++LASHFRSQSQVDPSS SRRGFH+EPGTREKALLAEDP LRRFRSHKK V+R
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 72  IKKIGDVLTIVVVAGCCYEIYVKATMREEA-RQAKAASEST 112
           +K++GDVLTIVVVAGCCYEIYVKATMREEA RQAK  S ST
Sbjct: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGSGST 101

[Close]

BLAST of CmoCh10G001530 vs. NCBI nr
Match: gi|659105547|ref|XP_008453123.1| (PREDICTED: uncharacterized protein LOC103493932 [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 8.3e-38
Identity = 84/101 (83.17%), Postives = 91/101 (90.10%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPSS-PSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVA 71
           MAF L K++LASHFRSQSQVDPSS  SRRGFH+EPGTREKALLAEDP LRRFRSHKK V+
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVS 60

Query: 72  RIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASEST 112
           R+K  GDVLTIVV+AGCCYEIYVKATMR+EARQAK  SEST
Sbjct: 61  RLKTFGDVLTIVVIAGCCYEIYVKATMRQEARQAKTGSEST 101

[Close]

BLAST of CmoCh10G001530 vs. NCBI nr
Match: gi|700208510|gb|KGN63606.1| (hypothetical protein Csa_1G005670 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 7.0e-37
Identity = 82/95 (86.32%), Postives = 89/95 (93.68%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVAR 71
           MAF L K++LASHFRSQSQVDPSS SRRGFH+EPGTREKALLAEDP LRRFRSHKK V+R
Sbjct: 1   MAFFLNKSTLASHFRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 72  IKKIGDVLTIVVVAGCCYEIYVKATMREEA-RQAK 106
           +K++GDVLTIVVVAGCCYEIYVKATMREEA RQAK
Sbjct: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAK 95

[Close]

BLAST of CmoCh10G001530 vs. NCBI nr
Match: gi|802652520|ref|XP_012080126.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X2 [Jatropha curcas])

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-30
Identity = 71/100 (71.00%), Postives = 84/100 (84.00%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQVDPS-SPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGVA 71
           MAFLL  ++++SHFRSQSQ   S S SRRGFH+EPG REKALLAEDP L+RF+SHKK V 
Sbjct: 1   MAFLLNNSTISSHFRSQSQTQDSLSLSRRGFHVEPGVREKALLAEDPVLKRFKSHKKSVW 60

Query: 72  RIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASES 111
           R+K++GDVLTIVVVAGCCYEIYVKA MREEAR+ +  S +
Sbjct: 61  RLKRVGDVLTIVVVAGCCYEIYVKAVMREEARRKEGESSA 100

[Close]

BLAST of CmoCh10G001530 vs. NCBI nr
Match: gi|802652517|ref|XP_012080125.1| (PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas])

HSP 1 Score: 139.0 bits (349), Expect = 4.9e-30
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 1


Query: 12  MAFLLTKTSLASHFRSQSQV--DPSSPSRRGFHIEPGTREKALLAEDPSLRRFRSHKKGV 71
           MAFLL  ++++SHFRSQSQ   D  S SRRGFH+EPG REKALLAEDP L+RF+SHKK V
Sbjct: 1   MAFLLNNSTISSHFRSQSQKTQDSLSLSRRGFHVEPGVREKALLAEDPVLKRFKSHKKSV 60

Query: 72  ARIKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASES 111
            R+K++GDVLTIVVVAGCCYEIYVKA MREEAR+ +  S +
Sbjct: 61  WRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARRKEGESSA 101

The following BLAST results are available for this feature:

BLAST of CmoCh10G001530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SDH7B_ARATH	7.0e-29	67.00	Succinate dehydrogenase subunit 7B, mitochondrial OS=Arabidopsis thaliana GN=SDH...	[more]
SDH7A_ARATH	5.6e-26	68.42	Succinate dehydrogenase subunit 7A, mitochondrial OS=Arabidopsis thaliana GN=SDH...	[more]
SDH7_ORYSJ	1.6e-12	46.91	Succinate dehydrogenase subunit 7, mitochondrial OS=Oryza sativa subsp. japonica...	[more]

BLAST of CmoCh10G001530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUC0_CUCSA	4.9e-37	86.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005670 PE=4 SV=1	[more]
D7SHW9_VITVI	9.9e-30	71.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g07810 PE=4 SV=...	[more]
V4KNY4_EUTSA	1.7e-29	70.71	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10005150mg PE=4 SV=1	[more]
M5WEL7_PRUPE	1.4e-28	71.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013774mg PE=4 SV=1	[more]
A0A061FTE5_THECC	1.6e-27	70.87	Uncharacterized protein OS=Theobroma cacao GN=TCM_011992 PE=4 SV=1	[more]

BLAST of CmoCh10G001530 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G62575.2	4.0e-30	67.00	unknown protein	[more]
AT3G47833.1	3.1e-27	68.42	unknown protein	[more]

BLAST of CmoCh10G001530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440710\|ref\|XP_004138127.1\|	6.3e-38	84.16	PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial [Cucumis sativus]	[more]
gi\|659105547\|ref\|XP_008453123.1\|	8.3e-38	83.17	PREDICTED: uncharacterized protein LOC103493932 [Cucumis melo]	[more]
gi\|700208510\|gb\|KGN63606.1\|	7.0e-37	86.32	hypothetical protein Csa_1G005670 [Cucumis sativus]	[more]
gi\|802652520\|ref\|XP_012080126.1\|	2.2e-30	71.00	PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X2 [Ja...	[more]
gi\|802652517\|ref\|XP_012080125.1\|	4.9e-30	70.30	PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Ja...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008483	transaminase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh10G001530.1	CmoCh10G001530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36041	FAMILY NOT NAMED	coord: 13..109 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh10G001530	Cucsa.197150	Cucumber (Gy14) v1	cgycmoB0575
CmoCh10G001530	Cla019169	Watermelon (97103) v1	cmowmB064
CmoCh10G001530	Csa1G005670	Cucumber (Chinese Long) v2	cmocuB037
CmoCh10G001530	MELO3C017115	Melon (DHL92) v3.5.1	cmomeB057
CmoCh10G001530	ClCG06G016770	Watermelon (Charleston Gray)	cmowcgB065
CmoCh10G001530	CSPI01G01680	Wild cucumber (PI 183967)	cmocpiB040
CmoCh10G001530	Lsi06G015270	Bottle gourd (USVL1VR-Ls)	cmolsiB058
CmoCh10G001530	Cp4.1LG04g15390	Cucurbita pepo (Zucchini)	cmocpeB070
CmoCh10G001530	Cp4.1LG18g08230	Cucurbita pepo (Zucchini)	cmocpeB055
CmoCh10G001530	MELO3C017115.2	Melon (DHL92) v3.6.1	cmomedB060
CmoCh10G001530	CsaV3_1G001750	Cucumber (Chinese Long) v3	cmocucB0044
CmoCh10G001530	Cla97C06G126390	Watermelon (97103) v2	cmowmbB071
CmoCh10G001530	Bhi02G000310	Wax gourd	cmowgoB0081
CmoCh10G001530	CsGy1G001710	Cucumber (Gy14) v2	cgybcmoB005
CmoCh10G001530	Carg18148	Silver-seed gourd	carcmoB0837
CmoCh10G001530	Carg10369	Silver-seed gourd	carcmoB0493

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh10G001530	CmoCh11G001150	Cucurbita moschata (Rifu)	cmocmoB039

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh10G001530	Silver-seed gourd	carcmoB0667
CmoCh10G001530	Silver-seed gourd	carcmoB1345
CmoCh10G001530	Cucumber (Chinese Long) v3	cmocucB0061
CmoCh10G001530	Cucumber (Chinese Long) v3	cmocucB0083
CmoCh10G001530	Watermelon (97103) v2	cmowmbB040
CmoCh10G001530	Watermelon (97103) v2	cmowmbB064
CmoCh10G001530	Wax gourd	cmowgoB0048
CmoCh10G001530	Cucurbita moschata (Rifu)	cmocmoB051
CmoCh10G001530	Cucurbita moschata (Rifu)	cmocmoB057
CmoCh10G001530	Cucurbita moschata (Rifu)	cmocmoB065
CmoCh10G001530	Cucurbita moschata (Rifu)	cmocmoB073
CmoCh10G001530	Cucumber (Gy14) v1	cgycmoB0201
CmoCh10G001530	Cucurbita maxima (Rimu)	cmacmoB067
CmoCh10G001530	Cucurbita maxima (Rimu)	cmacmoB100
CmoCh10G001530	Cucurbita maxima (Rimu)	cmacmoB208
CmoCh10G001530	Cucurbita maxima (Rimu)	cmacmoB388
CmoCh10G001530	Wild cucumber (PI 183967)	cmocpiB056
CmoCh10G001530	Cucumber (Chinese Long) v2	cmocuB057
CmoCh10G001530	Melon (DHL92) v3.5.1	cmomeB041
CmoCh10G001530	Watermelon (Charleston Gray)	cmowcgB037
CmoCh10G001530	Watermelon (Charleston Gray)	cmowcgB040
CmoCh10G001530	Watermelon (97103) v1	cmowmB054
CmoCh10G001530	Watermelon (97103) v1	cmowmB036
CmoCh10G001530	Cucurbita pepo (Zucchini)	cmocpeB043
CmoCh10G001530	Cucurbita pepo (Zucchini)	cmocpeB058
CmoCh10G001530	Bottle gourd (USVL1VR-Ls)	cmolsiB041
CmoCh10G001530	Cucumber (Gy14) v2	cgybcmoB021
CmoCh10G001530	Cucumber (Gy14) v2	cgybcmoB554
CmoCh10G001530	Melon (DHL92) v3.6.1	cmomedB042
CmoCh10G001530	Melon (DHL92) v3.6.1	cmomedB045
CmoCh10G001530	Melon (DHL92) v3.6.1	cmomedB072