CSPI01G00460 (gene) Wild cucumber (PI 183967)

NameCSPI01G00460
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionProtein of unknown function (DUF 3339)
LocationChr1 : 249163 .. 250183 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACAATTCTTACAATTGAAAAGCCTAATACCAAAGTACATTAAATTTTAGGTCATAAAGTTTGTGAGACGATGACAGAAAAAAACAAATAAAAGAAATGGGAAAGGCTCATCCGTCCACGTGAAGCATCAAGATCAACGCAGTTGTCGAATCAGTGTCCAGCTTCCAAGTTTCAAAACCACTCCATTTCTTTACCCTTCTCAAATCTTCTCAACTTAAAACCACACCATCCCTATTCATCCCCAATCCCAAATCCCACTTTCTTTCTTCTTTAATCTTTAGTTTTAAGACTCATAATGGCTGATTGGGGGCCGGTGATTATAGCGGTGGTGCTCTTCGTCCTGCTCAGTCCAGGCCTTCTCTTTCAGATCCCAGCCAAAGGAAGAGTTGTTGAATTCGGAAACATGCAGACTAGTGGGGCTTCCATTTTAGTCCATGCCATCATCTACTTTGGCCTCATCACTATCTTCCTCATCGCCATCGGTGTTCATATCTACACTGGCTAAAACCCAACTCCCCTCTTCTCTTTAATCTACTCTGTACTGCCTTTTCTTTCTCTTTCTTGTTCTATAATCGATGGATTGTTGTCTGTTATGTGACTTGTGACTTTTACTGTCTAGTTGGAGTTTCAACGATTGCGATTGTAAAATTGGTTTGATTTTAAACGCGATTTATAAATTGAATGGCTGCTGTTGGGTGTTGGGTGTTGGGTGTTTGGTACAGATTCAGGGAAAAAGATTCCGATATACGATTCCCATAGGGTTTATATGACCATTTACATCTGCTTTTACCGTTTCATTCTCTTTCTCGTCGTTTGGGTTTCGATGGCCCCCGCCACCGCTTCTGGGCGGTGGTAGTTCCCGTCGGTGCACGTGGACCCAATTGAAGGCGGCCCTACAGTTACGTTTCTTTTTAACATTTGTTTAATTATAATTTGAGGCTTTTTTTCTTAGAAAAGAATATTCGAGTATTTTGATAAAGGCGTTTCTTCGAAATAAGAAATAATAATACACAAGGCGGT

mRNA sequence

ATGGCTGATTGGGGGCCGGTGATTATAGCGGTGGTGCTCTTCGTCCTGCTCAGTCCAGGCCTTCTCTTTCAGATCCCAGCCAAAGGAAGAGTTGTTGAATTCGGAAACATGCAGACTAGTGGGGCTTCCATTTTAGTCCATGCCATCATCTACTTTGGCCTCATCACTATCTTCCTCATCGCCATCGGTGTTCATATCTACACTGGCTAA

Coding sequence (CDS)

ATGGCTGATTGGGGGCCGGTGATTATAGCGGTGGTGCTCTTCGTCCTGCTCAGTCCAGGCCTTCTCTTTCAGATCCCAGCCAAAGGAAGAGTTGTTGAATTCGGAAACATGCAGACTAGTGGGGCTTCCATTTTAGTCCATGCCATCATCTACTTTGGCCTCATCACTATCTTCCTCATCGCCATCGGTGTTCATATCTACACTGGCTAA
BLAST of CSPI01G00460 vs. TrEMBL
Match: A0A0A0LNK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001470 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.2e-28
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI
Sbjct: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60

Query: 61 AIGVHIYTG 70
          AIGVHIYTG
Sbjct: 61 AIGVHIYTG 69

BLAST of CSPI01G00460 vs. TrEMBL
Match: I1K6N1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G204400 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.2e-27
Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1   MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
           MADWGPV+IAVVLFVLLSPGLLFQ+PA+GRV EFGNMQTSGASILVHAIIYFGLITIFLI
Sbjct: 35  MADWGPVVIAVVLFVLLSPGLLFQMPARGRVAEFGNMQTSGASILVHAIIYFGLITIFLI 94

Query: 61  AIGVHIYTG 70
           AIGVHIYTG
Sbjct: 95  AIGVHIYTG 103

BLAST of CSPI01G00460 vs. TrEMBL
Match: A0A0B2QV82_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039124 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.2e-27
Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1   MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
           MADWGPV+IAVVLFVLLSPGLLFQ+PA+GRV EFGNMQTSGASILVHAIIYFGLITIFLI
Sbjct: 35  MADWGPVVIAVVLFVLLSPGLLFQMPARGRVAEFGNMQTSGASILVHAIIYFGLITIFLI 94

Query: 61  AIGVHIYTG 70
           AIGVHIYTG
Sbjct: 95  AIGVHIYTG 103

BLAST of CSPI01G00460 vs. TrEMBL
Match: A0A067JSU9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26435 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.9e-27
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPVI+AVVLFVLL+PGLLFQIP KGRVVEFGNMQTSGASI+VHAIIYFGL+TIFLI
Sbjct: 1  MADWGPVIVAVVLFVLLTPGLLFQIPGKGRVVEFGNMQTSGASIIVHAIIYFGLLTIFLI 60

Query: 61 AIGVHIYTG 70
          AIGVHIYTG
Sbjct: 61 AIGVHIYTG 69

BLAST of CSPI01G00460 vs. TrEMBL
Match: Q7X9E3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G286200g PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.9e-27
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPVIIAVVLFVLLSPGLLFQIP++GR+ EFGNMQTSGASILVHA+IYFGLITIFLI
Sbjct: 1  MADWGPVIIAVVLFVLLSPGLLFQIPSRGRIAEFGNMQTSGASILVHAVIYFGLITIFLI 60

Query: 61 AIGVHIYTG 70
          AIGVHIYTG
Sbjct: 61 AIGVHIYTG 69

BLAST of CSPI01G00460 vs. TAIR10
Match: AT5G63500.1 (AT5G63500.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 120.9 bits (302), Expect = 3.1e-28
Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPV+IAV+LFV+LSPGLLFQIPA GRVVEFGNMQTSGASILVHAII+FGLITIF I
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AIGVHIYTG 70
          AI VHIY+G
Sbjct: 61 AINVHIYSG 69

BLAST of CSPI01G00460 vs. TAIR10
Match: AT3G48660.1 (AT3G48660.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 120.6 bits (301), Expect = 4.0e-28
Identity = 59/69 (85.51%), Postives = 66/69 (95.65%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPV++AV+LFVLL+PGLLFQIPA+GRVVEFGNMQTSGASILVH II+FGLITIF I
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AIGVHIYTG 70
          AI +HIYTG
Sbjct: 61 AIRLHIYTG 69

BLAST of CSPI01G00460 vs. TAIR10
Match: AT5G40980.1 (AT5G40980.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 100.9 bits (250), Expect = 3.3e-22
Identity = 49/66 (74.24%), Postives = 59/66 (89.39%), Query Frame = 1

Query: 2  ADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLIA 61
          ADWGPVI+AV LF+LLSPGLLFQ+PA+ RV+EFGNM TSG SILVHAIIYF ++TI +IA
Sbjct: 3  ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIA 62

Query: 62 IGVHIY 68
          I +HI+
Sbjct: 63 IQIHIH 68

BLAST of CSPI01G00460 vs. TAIR10
Match: AT3G27027.1 (AT3G27027.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 96.3 bits (238), Expect = 8.0e-21
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 1

Query: 3  DWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLIAI 62
          DWGPVI+AV LF+LLSPGLLFQ+PA+ RVVEFGNM TSG +ILVHA IYF ++TI +IAI
Sbjct: 4  DWGPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVHAFIYFCILTILVIAI 63

Query: 63 GVHIY 68
           +HI+
Sbjct: 64 QIHIH 68

BLAST of CSPI01G00460 vs. TAIR10
Match: AT3G01940.1 (AT3G01940.1 Protein of unknown function (DUF 3339))

HSP 1 Score: 95.5 bits (236), Expect = 1.4e-20
Identity = 47/66 (71.21%), Postives = 58/66 (87.88%), Query Frame = 1

Query: 2  ADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLIA 61
          ADWGPV +AVVLFV+LSPGLLFQ+PA+ RV+E GNM TSG SILVHAI++F +ITI +IA
Sbjct: 4  ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query: 62 IGVHIY 68
          I +HI+
Sbjct: 64 IQIHIH 69

BLAST of CSPI01G00460 vs. NCBI nr
Match: gi|449440538|ref|XP_004138041.1| (PREDICTED: uncharacterized protein LOC101212373 [Cucumis sativus])

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-28
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI
Sbjct: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60

Query: 61 AIGVHIYTG 70
          AIGVHIYTG
Sbjct: 61 AIGVHIYTG 69

BLAST of CSPI01G00460 vs. NCBI nr
Match: gi|1012094223|ref|XP_015955605.1| (PREDICTED: uncharacterized protein LOC107479995 [Arachis duranensis])

HSP 1 Score: 129.4 bits (324), Expect = 2.4e-27
Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPV+IAVVLFVLLSPGLLFQIP +GRVVEFGNMQTSGASI+VHAIIYFGLITIFLI
Sbjct: 1  MADWGPVVIAVVLFVLLSPGLLFQIPGRGRVVEFGNMQTSGASIMVHAIIYFGLITIFLI 60

Query: 61 AIGVHIYTG 70
          AIGVHIYTG
Sbjct: 61 AIGVHIYTG 69

BLAST of CSPI01G00460 vs. NCBI nr
Match: gi|356513423|ref|XP_003525413.1| (PREDICTED: uncharacterized protein LOC100805083 [Glycine max])

HSP 1 Score: 129.0 bits (323), Expect = 3.2e-27
Identity = 65/69 (94.20%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1   MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
           MADWGPV+IAVVLFVLLSPGLLFQ+PA+GRV EFGNMQTSGASILVHAIIYFGLITIFLI
Sbjct: 35  MADWGPVVIAVVLFVLLSPGLLFQMPARGRVAEFGNMQTSGASILVHAIIYFGLITIFLI 94

Query: 61  AIGVHIYTG 70
           AIGVHIYTG
Sbjct: 95  AIGVHIYTG 103

BLAST of CSPI01G00460 vs. NCBI nr
Match: gi|802770909|ref|XP_012090676.1| (PREDICTED: uncharacterized protein LOC105648784 [Jatropha curcas])

HSP 1 Score: 128.6 bits (322), Expect = 4.1e-27
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPVI+AVVLFVLL+PGLLFQIP KGRVVEFGNMQTSGASI+VHAIIYFGL+TIFLI
Sbjct: 1  MADWGPVIVAVVLFVLLTPGLLFQIPGKGRVVEFGNMQTSGASIIVHAIIYFGLLTIFLI 60

Query: 61 AIGVHIYTG 70
          AIGVHIYTG
Sbjct: 61 AIGVHIYTG 69

BLAST of CSPI01G00460 vs. NCBI nr
Match: gi|593793969|ref|XP_007160023.1| (hypothetical protein PHAVU_002G286200g [Phaseolus vulgaris])

HSP 1 Score: 128.6 bits (322), Expect = 4.1e-27
Identity = 64/69 (92.75%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 1  MADWGPVIIAVVLFVLLSPGLLFQIPAKGRVVEFGNMQTSGASILVHAIIYFGLITIFLI 60
          MADWGPVIIAVVLFVLLSPGLLFQIP++GR+ EFGNMQTSGASILVHA+IYFGLITIFLI
Sbjct: 1  MADWGPVIIAVVLFVLLSPGLLFQIPSRGRIAEFGNMQTSGASILVHAVIYFGLITIFLI 60

Query: 61 AIGVHIYTG 70
          AIGVHIYTG
Sbjct: 61 AIGVHIYTG 69

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LNK0_CUCSA1.2e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G001470 PE=4 SV=1[more]
I1K6N1_SOYBN2.2e-2794.20Uncharacterized protein OS=Glycine max GN=GLYMA_05G204400 PE=4 SV=1[more]
A0A0B2QV82_GLYSO2.2e-2794.20Uncharacterized protein OS=Glycine soja GN=glysoja_039124 PE=4 SV=1[more]
A0A067JSU9_JATCU2.9e-2792.75Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26435 PE=4 SV=1[more]
Q7X9E3_PHAVU2.9e-2792.75Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G286200g PE=2 SV=1[more]
Match NameE-valueIdentityDescription
AT5G63500.13.1e-2888.41 Protein of unknown function (DUF 3339)[more]
AT3G48660.14.0e-2885.51 Protein of unknown function (DUF 3339)[more]
AT5G40980.13.3e-2274.24 Protein of unknown function (DUF 3339)[more]
AT3G27027.18.0e-2172.31 Protein of unknown function (DUF 3339)[more]
AT3G01940.11.4e-2071.21 Protein of unknown function (DUF 3339)[more]
Match NameE-valueIdentityDescription
gi|449440538|ref|XP_004138041.1|1.7e-28100.00PREDICTED: uncharacterized protein LOC101212373 [Cucumis sativus][more]
gi|1012094223|ref|XP_015955605.1|2.4e-2794.20PREDICTED: uncharacterized protein LOC107479995 [Arachis duranensis][more]
gi|356513423|ref|XP_003525413.1|3.2e-2794.20PREDICTED: uncharacterized protein LOC100805083 [Glycine max][more]
gi|802770909|ref|XP_012090676.1|4.1e-2792.75PREDICTED: uncharacterized protein LOC105648784 [Jatropha curcas][more]
gi|593793969|ref|XP_007160023.1|4.1e-2792.75hypothetical protein PHAVU_002G286200g [Phaseolus vulgaris][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021775DUF3339
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G00460.1CSPI01G00460.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021775Protein of unknown function DUF3339PFAMPF11820DUF3339coord: 1..67
score: 5.5
NoneNo IPR availablePANTHERPTHR33128FAMILY NOT NAMEDcoord: 1..69
score: 7.4

The following gene(s) are paralogous to this gene:

None