Bhi12G001899 (gene) Wax gourd

Overview
NameBhi12G001899
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionSeed nucellus-specific protein
Locationchr12 : 66229373 .. 66229708 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGATAGGTAAGAATCTCGTCGTCGTGCTCGTAGTCTCGACGTTGGCAATGGTGTTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCCTTGAAAGAAGCAGCAAAAGCTGATTACAATCCCCACATTTTGAATGAAAATGTGGAATATAAACCCAAGGAGGAATATGACTGTGATGGATATAGATACACAGATAGAGATTGTTATGAATATGGCAAATGTGACAACTTCTCCTATCTCGACGACGACGACCGTCAATACAATTGGAATTCCTATAAAAAATCGGTGGCAGAGGTGGTCGGAAAGTATGGAGTTCAGAAGAATTTCCCCTGA

mRNA sequence

ATGACGATAGGTAAGAATCTCGTCGTCGTGCTCGTAGTCTCGACGTTGGCAATGGTGTTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCCTTGAAAGAAGCAGCAAAAGCTGATTACAATCCCCACATTTTGAATGAAAATGTGGAATATAAACCCAAGGAGGAATATGACTGTGATGGATATAGATACACAGATAGAGATTGTTATGAATATGGCAAATGTGACAACTTCTCCTATCTCGACGACGACGACCGTCAATACAATTGGAATTCCTATAAAAAATCGGTGGCAGAGGTGGTCGGAAAGTATGGAGTTCAGAAGAATTTCCCCTGA

Coding sequence (CDS)

ATGACGATAGGTAAGAATCTCGTCGTCGTGCTCGTAGTCTCGACGTTGGCAATGGTGTTTCTGGAAAATGTTGAAGGAGGAAGAGAGATGGCCTTGAAAGAAGCAGCAAAAGCTGATTACAATCCCCACATTTTGAATGAAAATGTGGAATATAAACCCAAGGAGGAATATGACTGTGATGGATATAGATACACAGATAGAGATTGTTATGAATATGGCAAATGTGACAACTTCTCCTATCTCGACGACGACGACCGTCAATACAATTGGAATTCCTATAAAAAATCGGTGGCAGAGGTGGTCGGAAAGTATGGAGTTCAGAAGAATTTCCCCTGA

Protein sequence

MTIGKNLVVVLVVSTLAMVFLENVEGGREMALKEAAKADYNPHILNENVEYKPKEEYDCDGYRYTDRDCYEYGKCDNFSYLDDDDRQYNWNSYKKSVAEVVGKYGVQKNFP
Homology
[Close]
BLAST of Bhi12G001899 vs. TrEMBL
Match: tr|O22351|O22351_CITLA (Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.9e-24
Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 0 

Query: 3   IGKNLVVVLVVSTLAMVFLENVEGGREMALKEAAKADYNPHILNENVE-YKPKEEYDCDG 62
           +GK LV +LV+S +AM  LENVEGGREM LKEA    Y PH+LNE  E YKPKE+Y+CDG
Sbjct: 4   VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAY-PHVLNEKYEGYKPKEDYECDG 63

Query: 63  YRYTDRDCYEYGK-XXXXXXXDDDDRQYNWNSYKKSV---AEVVGKYGVQKNFP 112
           Y+Y D++CYEYG         ++DDRQYN + YKK +    E+  KYGV  NFP
Sbjct: 64  YKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]
BLAST of Bhi12G001899 vs. TrEMBL
Match: tr|A0A0A0L8T2|A0A0A0L8T2_CUCSA (Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-17
Identity = 59/133 (44.36%), Postives = 74/133 (55.64%), Query Frame = 0 

Query: 1   MTIGKNLVVVLVVSTLAMVFLENVEGGREMALKEAAKADYNPHILNENVE-YKP------ 60
           MTI K LV +L+VS +AM FLENVEGGREMALK+     Y+   L+EN E YKP      
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQE-LDENYEGYKPXXXXXX 60

Query: 61  ------------KEEYDCDGYRYTDRDCYEYGKXXXXXXXDDDDRQYNWNSYKKSVA--- 112
                            CDGY+Y+D+DCYEYG        +D D QYNW   KK +A   
Sbjct: 61  XXXXXXXXXXXXXXXXXCDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPK 120

[Close]
BLAST of Bhi12G001899 vs. TrEMBL
Match: tr|A0A0A0KAR7|A0A0A0KAR7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 8.8e-16
Identity = 67/117 (57.26%), Postives = 73/117 (62.39%), Query Frame = 0 

Query: 1   MTIGKNLVVVLVVSTLAMVFLENVEGGREMALKEAAKADYNPHILNENVEYKPKE-EYDC 60
           MT GKNLV VL  STLAM+F+ENVEG R+M LKEA KA YN  +LNE +EY P E EYDC
Sbjct: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKA-YNGQVLNEKMEYNPNEDEYDC 61

Query: 61  DGYRY--TDRDCYEYGKXXXXXXXDDDDRQYNWNSYKKSV---AEVVGKYGVQKNFP 112
           DGY+Y            XXXXXXX        WNSYK  V    EV  KY V KNFP
Sbjct: 62  DGYKYKXXXXXXXXXXXXXXXXXXXXXXXXXXWNSYKNPVPKPKEVDEKYKVHKNFP 117

[Close]
BLAST of Bhi12G001899 vs. NCBI nr
Match: AAB82329.1 (seed nucellus-specific protein [Citrullus lanatus])

HSP 1 Score: 119.8 bits (299), Expect = 5.9e-24
Identity = 64/114 (56.14%), Postives = 79/114 (69.30%), Query Frame = 0 

Query: 3   IGKNLVVVLVVSTLAMVFLENVEGGREMALKEAAKADYNPHILNENVE-YKPKEEYDCDG 62
           +GK LV +LV+S +AM  LENVEGGREM LKEA    Y PH+LNE  E YKPKE+Y+CDG
Sbjct: 4   VGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAY-PHVLNEKYEGYKPKEDYECDG 63

Query: 63  YRYTDRDCYEYGK-XXXXXXXDDDDRQYNWNSYKKSV---AEVVGKYGVQKNFP 112
           Y+Y D++CYEYG         ++DDRQYN + YKK +    E+  KYGV  NFP
Sbjct: 64  YKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKYGVHHNFP 116

[Close]
BLAST of Bhi12G001899 vs. NCBI nr
Match: KGN58370.1 (Seed nucellus-specific protein [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 4.1e-17
Identity = 59/133 (44.36%), Postives = 74/133 (55.64%), Query Frame = 0 

Query: 1   MTIGKNLVVVLVVSTLAMVFLENVEGGREMALKEAAKADYNPHILNENVE-YKP------ 60
           MTI K LV +L+VS +AM FLENVEGGREMALK+     Y+   L+EN E YKP      
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQE-LDENYEGYKPXXXXXX 60

Query: 61  ------------KEEYDCDGYRYTDRDCYEYGKXXXXXXXDDDDRQYNWNSYKKSVA--- 112
                            CDGY+Y+D+DCYEYG        +D D QYNW   KK +A   
Sbjct: 61  XXXXXXXXXXXXXXXXXCDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPK 120

[Close]
BLAST of Bhi12G001899 vs. NCBI nr
Match: KGN46573.1 (hypothetical protein Csa_6G109680 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15
Identity = 67/117 (57.26%), Postives = 73/117 (62.39%), Query Frame = 0 

Query: 1   MTIGKNLVVVLVVSTLAMVFLENVEGGREMALKEAAKADYNPHILNENVEYKPKE-EYDC 60
           MT GKNLV VL  STLAM+F+ENVEG R+M LKEA KA YN  +LNE +EY P E EYDC
Sbjct: 2   MTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKA-YNGQVLNEKMEYNPNEDEYDC 61

Query: 61  DGYRY--TDRDCYEYGKXXXXXXXDDDDRQYNWNSYKKSV---AEVVGKYGVQKNFP 112
           DGY+Y            XXXXXXX        WNSYK  V    EV  KY V KNFP
Sbjct: 62  DGYKYKXXXXXXXXXXXXXXXXXXXXXXXXXXWNSYKNPVPKPKEVDEKYKVHKNFP 117

The following BLAST results are available for this feature:
BLAST of Bhi12G001899 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi12G001899 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi12G001899 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|O22351|O22351_CITLA3.9e-2456.14Seed nucellus-specific protein OS=Citrullus lanatus OX=3654 GN=WM403 PE=4 SV=1[more]
tr|A0A0A0L8T2|A0A0A0L8T2_CUCSA2.7e-1744.36Seed nucellus-specific protein OS=Cucumis sativus OX=3659 GN=Csa_3G630260 PE=4 S... [more]
tr|A0A0A0KAR7|A0A0A0KAR7_CUCSA8.8e-1657.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109680 PE=4 SV=1[more]
BLAST of Bhi12G001899 vs. NCBI nr
Match NameE-valueIdentityDescription
AAB82329.15.9e-2456.14seed nucellus-specific protein [Citrullus lanatus][more]
KGN58370.14.1e-1744.36Seed nucellus-specific protein [Cucumis sativus][more]
KGN46573.11.3e-1557.26hypothetical protein Csa_6G109680 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi12M001899Bhi12M001899mRNA