MELO3C021150 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021150
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSeed nucellus-specific protein
Locationchr11 : 28854386 .. 28854930 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTCATACAAATATAGAGAAATTATACAAAGCAAGCTTAGATGATGATGATTGGTAAGAATCTCGTTGCCGTGCTTGCAATCTCGACACTGGTAATGATGTTTATGGAAAATGTTGAAGGAGGAAGAGAGATGGGCTTGAAGGAAGCAACAAAAGCTTACAATGGTCACGTTTTGAATGAAAACGTGGATTACAAACCTAAGGAGGAAGATGGTTGCGATGGATACAAATATAAAGATAAAGATTGTTATGAATATGGTAACTGTGGCAAATCCCCCTATCCCGACTATGACGATGGCCAATATAATTGGAATTCGCACATGAAACCAGTGCCAAAGCCGAAAGAGATGGATGAAAAGTACAAGAATATCCCCCGAGAGTAGCAATGCTAAAACAAACCCCATAAGCATAGTATTGTTTATGGATCCTATGAATAAAAAATGAGTATAGGTCTAATATTTGAGGCCAATGTAATGGAATGAAAATCTTTGTTAAGTATGCTATTTTCTAATCAATACTATACTCTCCTCCATGTTTAATCTTTTC

mRNA sequence

ACTCATACAAATATAGAGAAATTATACAAAGCAAGCTTAGATGATGATGATTGGTAAGAATCTCGTTGCCGTGCTTGCAATCTCGACACTGGTAATGATGTTTATGGAAAATGTTGAAGGAGGAAGAGAGATGGGCTTGAAGGAAGCAACAAAAGCTTACAATGGTCACGTTTTGAATGAAAACGTGGATTACAAACCTAAGGAGGAAGATGGTTGCGATGGATACAAATATAAAGATAAAGATTGTTATGAATATGGTAACTGTGGCAAATCCCCCTATCCCGACTATGACGATGGCCAATATAATTGGAATTCGCACATGAAACCAGTGCCAAAGCCGAAAGAGATGGATGAAAAGTACAAGAATATCCCCCGAGAGTAGCAATGCTAAAACAAACCCCATAAGCATAGTATTGTTTATGGATCCTATGAATAAAAAATGAGTATAGGTCTAATATTTGAGGCCAATGTAATGGAATGAAAATCTTTGTTAAGTATGCTATTTTCTAATCAATACTATACTCTCCTCCATGTTTAATCTTTTC

Coding sequence (CDS)

ATGATGATGATTGGTAAGAATCTCGTTGCCGTGCTTGCAATCTCGACACTGGTAATGATGTTTATGGAAAATGTTGAAGGAGGAAGAGAGATGGGCTTGAAGGAAGCAACAAAAGCTTACAATGGTCACGTTTTGAATGAAAACGTGGATTACAAACCTAAGGAGGAAGATGGTTGCGATGGATACAAATATAAAGATAAAGATTGTTATGAATATGGTAACTGTGGCAAATCCCCCTATCCCGACTATGACGATGGCCAATATAATTGGAATTCGCACATGAAACCAGTGCCAAAGCCGAAAGAGATGGATGAAAAGTACAAGAATATCCCCCGAGAGTAG

Protein sequence

MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVLNENVDYKPKEEDGCDGYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKEMDEKYKNIPRE*
Homology
[Close]
BLAST of MELO3C021150 vs. TrEMBL
Match: A0A0A0KAR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109680 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-42
Identity = 85/111 (76.58%), Postives = 93/111 (83.78%), Query Frame = 1 

Query: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVLNENVDYKPKEED-GC 60
           MM  GKNLVAVLA STL MMFMENVEG R+MGLKEATKAYNG VLNE ++Y P E++  C
Sbjct: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60

Query: 61  DGYKYKDKDCYEYGNCGKSPY--PDYDDGQYNWNSHMKPVPKPKEMDEKYK 109
           DGYKYKDKDCY+YGNC KSPY   D DDGQYNWNS+  PVPKPKE+DEKYK
Sbjct: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYK 111

[Close]
BLAST of MELO3C021150 vs. TrEMBL
Match: O22351_CITLA (Seed nucellus-specific protein OS=Citrullus lanatus GN=WM403 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.4e-31
Identity = 70/109 (64.22%), Postives = 82/109 (75.23%), Query Frame = 1 

Query: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVLNENVD-YKPKEEDGC 60
           M ++GK LVA+L IS + M  +ENVEGGREMGLKEAT     HVLNE  + YKPKE+  C
Sbjct: 1   MKIVGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYEC 60

Query: 61  DGYKYKDKDCYEYGNCGKSPY-PDYDDGQYNWNSHMKPVPKPKEMDEKY 108
           DGYKYKDK+CYEYGNC KSPY  + DD QYN + + KP+PKPKEM  KY
Sbjct: 61  DGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKY 109

[Close]
BLAST of MELO3C021150 vs. TrEMBL
Match: A0A0A0L8T2_CUCSA (Seed nucellus-specific protein OS=Cucumis sativus GN=Csa_3G630260 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 6.2e-27
Identity = 64/125 (51.20%), Postives = 76/125 (60.80%), Query Frame = 1 

Query: 2   MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVLNENVD----------- 61
           M I K LVA+L +S + M F+ENVEGGREM LK+ T       L+EN +           
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 62  --------YKPKEEDGCDGYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKE 108
                   YKPKE+  CDGYKY DKDCYEYGNC KSPY +  D QYNW  + KP+ KPKE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

[Close]
BLAST of MELO3C021150 vs. NCBI nr
Match: gi|700191369|gb|KGN46573.1| (hypothetical protein Csa_6G109680 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 4.4e-42
Identity = 85/111 (76.58%), Postives = 93/111 (83.78%), Query Frame = 1 

Query: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVLNENVDYKPKEED-GC 60
           MM  GKNLVAVLA STL MMFMENVEG R+MGLKEATKAYNG VLNE ++Y P E++  C
Sbjct: 1   MMTTGKNLVAVLAFSTLAMMFMENVEGERKMGLKEATKAYNGQVLNEKMEYNPNEDEYDC 60

Query: 61  DGYKYKDKDCYEYGNCGKSPY--PDYDDGQYNWNSHMKPVPKPKEMDEKYK 109
           DGYKYKDKDCY+YGNC KSPY   D DDGQYNWNS+  PVPKPKE+DEKYK
Sbjct: 61  DGYKYKDKDCYDYGNCDKSPYDHSDDDDGQYNWNSYKNPVPKPKEVDEKYK 111

[Close]
BLAST of MELO3C021150 vs. NCBI nr
Match: gi|2576407|gb|AAB82329.1| (seed nucellus-specific protein [Citrullus lanatus])

HSP 1 Score: 142.9 bits (359), Expect = 3.5e-31
Identity = 70/109 (64.22%), Postives = 82/109 (75.23%), Query Frame = 1 

Query: 1   MMMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVLNENVD-YKPKEEDGC 60
           M ++GK LVA+L IS + M  +ENVEGGREMGLKEAT     HVLNE  + YKPKE+  C
Sbjct: 1   MKIVGKVLVAMLVISAIAMALLENVEGGREMGLKEATANAYPHVLNEKYEGYKPKEDYEC 60

Query: 61  DGYKYKDKDCYEYGNCGKSPY-PDYDDGQYNWNSHMKPVPKPKEMDEKY 108
           DGYKYKDK+CYEYGNC KSPY  + DD QYN + + KP+PKPKEM  KY
Sbjct: 61  DGYKYKDKNCYEYGNCDKSPYNEEEDDRQYNGSPYKKPIPKPKEMARKY 109

[Close]
BLAST of MELO3C021150 vs. NCBI nr
Match: gi|700203237|gb|KGN58370.1| (Seed nucellus-specific protein [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 8.8e-27
Identity = 64/125 (51.20%), Postives = 76/125 (60.80%), Query Frame = 1 

Query: 2   MMIGKNLVAVLAISTLVMMFMENVEGGREMGLKEATKAYNGHVLNENVD----------- 61
           M I K LVA+L +S + M F+ENVEGGREM LK+ T       L+EN +           
Sbjct: 1   MTISKVLVAILMVSAMAMAFLENVEGGREMALKKPTAKTYSQELDENYEGYKPKEDYEGY 60

Query: 62  --------YKPKEEDGCDGYKYKDKDCYEYGNCGKSPYPDYDDGQYNWNSHMKPVPKPKE 108
                   YKPKE+  CDGYKY DKDCYEYGNC KSPY +  D QYNW  + KP+ KPKE
Sbjct: 61  KPKEDYEGYKPKEDYECDGYKYSDKDCYEYGNCDKSPYNEDIDHQYNWGPNKKPIAKPKE 120

The following BLAST results are available for this feature:
BLAST of MELO3C021150 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAR7_CUCSA3.0e-4276.58Uncharacterized protein OS=Cucumis sativus GN=Csa_6G109680 PE=4 SV=1[more]
O22351_CITLA2.4e-3164.22Seed nucellus-specific protein OS=Citrullus lanatus GN=WM403 PE=4 SV=1[more]
A0A0A0L8T2_CUCSA6.2e-2751.20Seed nucellus-specific protein OS=Cucumis sativus GN=Csa_3G630260 PE=4 SV=1[more]
BLAST of MELO3C021150 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191369|gb|KGN46573.1|4.4e-4276.58hypothetical protein Csa_6G109680 [Cucumis sativus][more]
gi|2576407|gb|AAB82329.1|3.5e-3164.22seed nucellus-specific protein [Citrullus lanatus][more]
gi|700203237|gb|KGN58370.1|8.8e-2751.20Seed nucellus-specific protein [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49851melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021150T1MELO3C021150T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49851MU49851transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021150Csa6G109680Cucumber (Chinese Long) v2cumeB444
MELO3C021150Bhi12G001899Wax gourdmewgoB093
MELO3C021150CSPI06G08860Wild cucumber (PI 183967)cpimeB436
MELO3C021150CsGy6G008990Cucumber (Gy14) v2cgybmeB381
MELO3C021150CsaV3_6G009230Cucumber (Chinese Long) v3cucmeB446
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021150Watermelon (97103) v2mewmbB127
MELO3C021150Cucumber (Gy14) v1cgymeB176
MELO3C021150Cucurbita maxima (Rimu)cmameB313
MELO3C021150Cucurbita maxima (Rimu)cmameB821
MELO3C021150Cucurbita moschata (Rifu)cmomeB306
MELO3C021150Cucurbita moschata (Rifu)cmomeB805
MELO3C021150Watermelon (Charleston Gray)mewcgB124
MELO3C021150Watermelon (97103) v1mewmB137
MELO3C021150Cucurbita pepo (Zucchini)cpemeB112
MELO3C021150Cucurbita pepo (Zucchini)cpemeB285
MELO3C021150Bottle gourd (USVL1VR-Ls)lsimeB017
MELO3C021150Bottle gourd (USVL1VR-Ls)lsimeB018
MELO3C021150Silver-seed gourdcarmeB0563
MELO3C021150Silver-seed gourdcarmeB0603