Bhi11G000864 (gene) Wax gourd

Overview
NameBhi11G000864
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr11 : 30945507 .. 30946276 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGTCATCCCCTTAGTTTGCACCATCCCAAATCTCAAAAACAAGCCTTCAAAATTCAACTCACACCATCACAGAATCAAAACAATGGCCTCTTCCAAGTACTTGATGATCATAGCTTTCATGGCTATTTTGGTGTTTTCAACCATCGACACCGGCCGAGCTGCTCGTCATCTCTTGCAAACCGCTCCGCCGAACATGCCAGGGTTTCCGTCATTGCCTAAACCGACTGCACTACCGCCTCTACCACCTTTGCCGACGGGACCGGGAATGCCCTCTATTCCAAATCTCCCACAACCAACATTGCCTTCTTCTCTCCCTAAATTACCTCCACTTCCAAGTTTCCCCGGAAACATCCCGGTCACCGGAGTGACACTGCCTCCGCTCCCGACAACTTCACTTCCGACTTTACCTTCCATTCCAACGACTTTCCCGTCTATCCCTTTCCTCACTCCGCCCCCGGCCACCACCTCTTCACCTTGATGAGAGTCCTAGCTAGTCCCTTTGTTCTTCTCTTATTTATTGTTGAGAGTGTATGATTGTGTTTAATTTTATCTACTGTTTTGATATCATCCTATCTTTTATGTTATTTATGTAATATTGTGAGTTTCAGTTTAATCATGTATTGGGTTCTTGTGTACTTTTTGAATGATATGATATACGGATTTATCTTTCTAATTTTTTTTTTTTTTTTTTAAATAGTAAGAGAGATCACAAAACACATTGATGAGCTCAAAATCAAATGAAATTGGTGAAACTCTATCCTTTTCTA

mRNA sequence

AAATGTCATCCCCTTAGTTTGCACCATCCCAAATCTCAAAAACAAGCCTTCAAAATTCAACTCACACCATCACAGAATCAAAACAATGGCCTCTTCCAAGTACTTGATGATCATAGCTTTCATGGCTATTTTGGTGTTTTCAACCATCGACACCGGCCGAGCTGCTCGTCATCTCTTGCAAACCGCTCCGCCGAACATGCCAGGGTTTCCGTCATTGCCTAAACCGACTGCACTACCGCCTCTACCACCTTTGCCGACGGGACCGGGAATGCCCTCTATTCCAAATCTCCCACAACCAACATTGCCTTCTTCTCTCCCTAAATTACCTCCACTTCCAAGTTTCCCCGGAAACATCCCGGTCACCGGAGTGACACTGCCTCCGCTCCCGACAACTTCACTTCCGACTTTACCTTCCATTCCAACGACTTTCCCGTCTATCCCTTTCCTCACTCCGCCCCCGGCCACCACCTCTTCACCTTGATGAGAGTCCTAGCTAGTCCCTTTGTTCTTCTCTTATTTATTGTTGAGAGTGTATGATTGTGTTTAATTTTATCTACTGTTTTGATATCATCCTATCTTTTATGTTATTTATGTAATATTGTGAGTTTCAGTTTAATCATGTATTGGGTTCTTGTGTACTTTTTGAATGATATGATATACGGATTTATCTTTCTAATTTTTTTTTTTTTTTTTTAAATAGTAAGAGAGATCACAAAACACATTGATGAGCTCAAAATCAAATGAAATTGGTGAAACTCTATCCTTTTCTA

Coding sequence (CDS)

AATGTCATCCCCTTAGTTTGCACCATCCCAAATCTCAAAAACAAGCCTTCAAAATTCAACTCACACCATCACAGAATCAAAACAATGGCCTCTTCCAAGTACTTGATGATCATAGCTTTCATGGCTATTTTGGTGTTTTCAACCATCGACACCGGCCGAGCTGCTCGTCATCTCTTGCAAACCGCTCCGCCGAACATGCCAGGGTTTCCGTCATTGCCTAAACCGACTGCACTACCGCCTCTACCACCTTTGCCGACGGGACCGGGAATGCCCTCTATTCCAAATCTCCCACAACCAACATTGCCTTCTTCTCTCCCTAAATTACCTCCACTTCCAAGTTTCCCCGGAAACATCCCGGTCACCGGAGTGACACTGCCTCCGCTCCCGACAACTTCACTTCCGACTTTACCTTCCATTCCAACGACTTTCCCGTCTATCCCTTTCCTCACTCCGCCCCCGGCCACCACCTCTTCACCTTGA

Protein sequence

NVIPLVCTIPNLKNKPSKFNSHHHRIKTMASSKYLMIIAFMAILVFSTIDTGRAARHLLQTAPPNMPGFPSLPKPTALPPLPPLPTGPGMPSIPNLPQPTLPSSLPKLPPLPSFPGNIPVTGVTLPPLPTTSLPTLPSIPTTFPSIPFLTPPPATTSSP
Homology
[Close]
BLAST of Bhi11G000864 vs. NCBI nr
Match: XP_023518061.1 (protein PELPK1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 29 MASSKYLMIIAFMAILVFSTIDTGRAARHLLQTAPPN 66
          MASSKYL IIAFM  L+FS IDTGRAARHLLQTAPPN
Sbjct: 1  MASSKYL-IIAFMVTLMFSAIDTGRAARHLLQTAPPN 36

[Close]
BLAST of Bhi11G000864 vs. NCBI nr
Match: XP_023518060.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-05
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0 

Query: 29 MASSKYLMIIAFMAILVFSTIDTGRAARHLLQTAPPN 66
          MAS KYL IIAF+A LVFS IDTGRAARHLLQTAPPN
Sbjct: 1  MASFKYL-IIAFVATLVFSAIDTGRAARHLLQTAPPN 36

The following BLAST results are available for this feature:
BLAST of Bhi11G000864 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi11G000864 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi11G000864 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Bhi11G000864 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023518061.16.1e-0686.49protein PELPK1-like [Cucurbita pepo subsp. pepo][more]
XP_023518060.11.4e-0586.49proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016301 kinase activity
molecular_function GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi11M000864Bhi11M000864mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..108
NoneNo IPR availablePANTHERPTHR33088FAMILY NOT NAMEDcoord: 29..154
NoneNo IPR availablePANTHERPTHR33088:SF5SUBFAMILY NOT NAMEDcoord: 29..154

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi11G000864Csa4G182290Cucumber (Chinese Long) v2cuwgoB359
Bhi11G000864MELO3C018057Melon (DHL92) v3.5.1mewgoB564
Bhi11G000864ClCG10G009590Watermelon (Charleston Gray)wcgwgoB078
Bhi11G000864CSPI04G11870Wild cucumber (PI 183967)cpiwgoB361
Bhi11G000864Cucsa.331820Cucumber (Gy14) v1cgywgoB666
Bhi11G000864MELO3C018057.2Melon (DHL92) v3.6.1medwgoB569
Bhi11G000864CsaV3_4G014800Cucumber (Chinese Long) v3cucwgoB363
Bhi11G000864Cla006499Watermelon (97103) v1wgowmB007
Bhi11G000864Cla97C10G192660Watermelon (97103) v2wgowmbB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi11G000864Cucumber (Gy14) v1cgywgoB443
Bhi11G000864Cucumber (Gy14) v2cgybwgoB619
Bhi11G000864Cucurbita maxima (Rimu)cmawgoB0410
Bhi11G000864Cucurbita maxima (Rimu)cmawgoB0634
Bhi11G000864Cucurbita maxima (Rimu)cmawgoB0814
Bhi11G000864Cucurbita moschata (Rifu)cmowgoB0405
Bhi11G000864Cucurbita moschata (Rifu)cmowgoB0635
Bhi11G000864Cucurbita moschata (Rifu)cmowgoB0810
Bhi11G000864Cucurbita pepo (Zucchini)cpewgoB0266
Bhi11G000864Cucurbita pepo (Zucchini)cpewgoB0311
Bhi11G000864Cucurbita pepo (Zucchini)cpewgoB0477
Bhi11G000864Wild cucumber (PI 183967)cpiwgoB659
Bhi11G000864Cucumber (Chinese Long) v3cucwgoB674
Bhi11G000864Cucumber (Chinese Long) v2cuwgoB651
Bhi11G000864Bottle gourd (USVL1VR-Ls)lsiwgoB292
Bhi11G000864Melon (DHL92) v3.6.1medwgoB200
Bhi11G000864Melon (DHL92) v3.5.1mewgoB198
Bhi11G000864Watermelon (Charleston Gray)wcgwgoB010
Bhi11G000864Watermelon (97103) v2wgowmbB049
Bhi11G000864Silver-seed gourdcarwgoB0375
Bhi11G000864Silver-seed gourdcarwgoB0381
Bhi11G000864Silver-seed gourdcarwgoB0456