Bhi11G000863 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi11G000863
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Unknown protein
Location	chr11 : 30942631 .. 30942966 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAATGAAGTTGGAATGGTAGGGATTGACGGGAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAGCGCTAGCCCGCTCGGAAGCGGAGGGAGATTAACTTTAGGCAAGGTGGGTTGTGGTAAATTTGGAAGAGTAGTAGGGTTTGGCAAGGTCGGCAACGGCGGTATCCCGGTTGGAATCACCGGAAGGTTTGGCACCAAGGGCGGAGCCGTTTGCAAAAGATGGCGGGCAGCTTGGCCGAGGTCGATGCTCGAAAGAGCCAAAGTAGCCATGAAGGCAATGATCAAGAACTTGGAAGAACCCATTTTCTTTCCTTTGAGAAGATGA

mRNA sequence

ATGGAAGGAAATGAAGTTGGAATGGTAGGGATTGACGGGAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAGCGCTAGCCCGCTCGGAAGCGGAGGGAGATTAACTTTAGGCAAGGTGGGTTGTGGTAAATTTGGAAGAGTAGTAGGGTTTGGCAAGGTCGGCAACGGCGGTATCCCGGTTGGAATCACCGGAAGGTTTGGCACCAAGGGCGGAGCCGTTTGCAAAAGATGGCGGGCAGCTTGGCCGAGGTCGATGCTCGAAAGAGCCAAAGTAGCCATGAAGGCAATGATCAAGAACTTGGAAGAACCCATTTTCTTTCCTTTGAGAAGATGA

Coding sequence (CDS)

ATGGAAGGAAATGAAGTTGGAATGGTAGGGATTGACGGGAAGTTCGGAAGTGCCATTGTCGGGAGCGGTGGCAGCGCTAGCCCGCTCGGAAGCGGAGGGAGATTAACTTTAGGCAAGGTGGGTTGTGGTAAATTTGGAAGAGTAGTAGGGTTTGGCAAGGTCGGCAACGGCGGTATCCCGGTTGGAATCACCGGAAGGTTTGGCACCAAGGGCGGAGCCGTTTGCAAAAGATGGCGGGCAGCTTGGCCGAGGTCGATGCTCGAAAGAGCCAAAGTAGCCATGAAGGCAATGATCAAGAACTTGGAAGAACCCATTTTCTTTCCTTTGAGAAGATGA

Protein sequence

MEGNEVGMVGIDGKFGSAIVGSGGSASPLGSGGRLTLGKVGCGKFGRVVGFGKVGNGGIPVGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPIFFPLRR

Homology

[Close]

BLAST of Bhi11G000863 vs. TrEMBL
Match: tr|A0A0A0L0M4|A0A0A0L0M4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31
Identity = 77/108 (71.30%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGSASPLGSGGRLTLGKVGCGKFGRVVGFGKVGNGGIP 60
           MEGNE+GMVGIDGKFGS IVGSGG+ASP+GSGG+L  G VGC              GGI 
Sbjct: 1   MEGNEIGMVGIDGKFGSVIVGSGGNASPIGSGGKLIFGNVGC-XXXXXXXXXXXXXGGIR 60

Query: 61  VGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPIFFP 109
           VGI GRFGTKGG VC+RWRAAWP+ MLERAKVA+KAMIKNLE  IFFP
Sbjct: 61  VGIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107

[Close]

BLAST of Bhi11G000863 vs. TrEMBL
Match: tr|A0A0A0KYM4|A0A0A0KYM4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-27
Identity = 70/102 (68.63%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGSASPLGSGGRLTLGKVGCGKFGRVVGFGKVGNGGIP 60
           MEGNE+GMVGIDGKFGS IVGSGG+ SP+ SGG+LT G VGCG              GI 
Sbjct: 1   MEGNEIGMVGIDGKFGSVIVGSGGNGSPIESGGKLTFGNVGCG-XXXXXXXXXXXXXGIR 60

Query: 61  VGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLE 103
           VGI GRFGTKGG VC+RWR AWP+ MLERAKVA+KAMIKN E
Sbjct: 61  VGIAGRFGTKGGVVCQRWRVAWPKLMLERAKVAVKAMIKNFE 101

[Close]

BLAST of Bhi11G000863 vs. TrEMBL
Match: tr|A0A0A0L399|A0A0A0L399_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-21
Identity = 64/108 (59.26%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGSASPLGSGGRLTLGKVGCGKFGRVVGFGKVGNGGIP 60
           MEGNE+GMVGI G FGS IV             +L  G VGC              GGI 
Sbjct: 1   MEGNEIGMVGIGGNFGSVIVXXXXXXXXXXXXXKLIFGNVGC-XXXXXXXXXXXXXGGIR 60

Query: 61  VGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPIFFP 109
           VGI GRFGTKGG VC+RWRAAWP+ MLERAKVA+KAMIKNLE  IFFP
Sbjct: 61  VGIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107

[Close]

BLAST of Bhi11G000863 vs. TrEMBL
Match: tr|A0A1S4DZT7|A0A1S4DZT7_CUCME (uncharacterized PE-PGRS family protein PE_PGRS33 OS=Cucumis melo OX=3656 GN=LOC107991270 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-07
Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 2   EGNEVGMVGIDGKFGSAIVGSGGSAS-------PLGSGGRLTLGKVGCGKFGRVVGFGKV 61
           +G+ VG+ G DGKFGS +VG GG+A+        LGSGG ++LG+ G GKFG     G V
Sbjct: 33  DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 92

Query: 62  GNGGIPVGITG----RFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPI 106
                     G      G K G VC+R R     S LE AKV MKA +K L+E I
Sbjct: 93  XXXXXXXXADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 147

[Close]

BLAST of Bhi11G000863 vs. NCBI nr
Match: KGN54594.1 (hypothetical protein Csa_4G374620 [Cucumis sativus])

HSP 1 Score: 144.8 bits (364), Expect = 1.7e-31
Identity = 77/108 (71.30%), Postives = 84/108 (77.78%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGSASPLGSGGRLTLGKVGCGKFGRVVGFGKVGNGGIP 60
           MEGNE+GMVGIDGKFGS IVGSGG+ASP+GSGG+L  G VGC              GGI 
Sbjct: 1   MEGNEIGMVGIDGKFGSVIVGSGGNASPIGSGGKLIFGNVGC-XXXXXXXXXXXXXGGIR 60

Query: 61  VGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPIFFP 109
           VGI GRFGTKGG VC+RWRAAWP+ MLERAKVA+KAMIKNLE  IFFP
Sbjct: 61  VGIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107

[Close]

BLAST of Bhi11G000863 vs. NCBI nr
Match: KGN54598.1 (hypothetical protein Csa_4G375140 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 3.4e-27
Identity = 70/102 (68.63%), Postives = 77/102 (75.49%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGSASPLGSGGRLTLGKVGCGKFGRVVGFGKVGNGGIP 60
           MEGNE+GMVGIDGKFGS IVGSGG+ SP+ SGG+LT G VGCG              GI 
Sbjct: 1   MEGNEIGMVGIDGKFGSVIVGSGGNGSPIESGGKLTFGNVGCG-XXXXXXXXXXXXXGIR 60

Query: 61  VGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLE 103
           VGI GRFGTKGG VC+RWR AWP+ MLERAKVA+KAMIKN E
Sbjct: 61  VGIAGRFGTKGGVVCQRWRVAWPKLMLERAKVAVKAMIKNFE 101

[Close]

BLAST of Bhi11G000863 vs. NCBI nr
Match: KGN54596.1 (hypothetical protein Csa_4G374640 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21
Identity = 64/108 (59.26%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 1   MEGNEVGMVGIDGKFGSAIVGSGGSASPLGSGGRLTLGKVGCGKFGRVVGFGKVGNGGIP 60
           MEGNE+GMVGI G FGS IV             +L  G VGC              GGI 
Sbjct: 1   MEGNEIGMVGIGGNFGSVIVXXXXXXXXXXXXXKLIFGNVGC-XXXXXXXXXXXXXGGIR 60

Query: 61  VGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPIFFP 109
           VGI GRFGTKGG VC+RWRAAWP+ MLERAKVA+KAMIKNLE  IFFP
Sbjct: 61  VGIAGRFGTKGGVVCERWRAAWPKLMLERAKVAVKAMIKNLEVAIFFP 107

[Close]

BLAST of Bhi11G000863 vs. NCBI nr
Match: XP_016901486.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS33, partial [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-07
Identity = 50/115 (43.48%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 2   EGNEVGMVGIDGKFGSAIVGSGGSAS-------PLGSGGRLTLGKVGCGKFGRVVGFGKV 61
           +G+ VG+ G DGKFGS +VG GG+A+        LGSGG ++LG+ G GKFG     G V
Sbjct: 33  DGSVVGIDGRDGKFGSEVVGRGGNATLVGMFMGRLGSGGSVSLGREGSGKFGMDGILGPV 92

Query: 62  GNGGIPVGITG----RFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPI 106
                     G      G K G VC+R R     S LE AKV MKA +K L+E I
Sbjct: 93  XXXXXXXXADGLGSDGIGGKFGIVCRRCREVRAASTLENAKVTMKARMKQLKEAI 147

[Close]

BLAST of Bhi11G000863 vs. NCBI nr
Match: GAU30557.1 (hypothetical protein TSUD_65670 [Trifolium subterraneum])

HSP 1 Score: 52.8 bits (125), Expect = 8.9e-04
Identity = 48/108 (44.44%), Postives = 56/108 (51.85%), Query Frame = 0


Query: 7   GMVGIDGKFGSAIVGSGGSASPL--------GSGGRLTLGKVGC-GKFGRVVGFGKVGNG 66
           G VGI GKFG  +V     AS L         +GGR   G VG  GK G VVGFGK    
Sbjct: 75  GKVGILGKFGCVVVCKRWRASMLMLDIVTTRSNGGRFPCGNVGIEGKGGNVVGFGK---- 134

Query: 67  GIPVGITGRFGTKGGAVCKRWRAAWPRSMLERAKVAMKAMIKNLEEPI 106
              VGI G+FG     VCKRWRA+    ML+      KAM+K+L + I
Sbjct: 135 ---VGILGKFGCV--VVCKRWRAS--MLMLDIVTTRSKAMMKDLLDAI 171

The following BLAST results are available for this feature:

BLAST of Bhi11G000863 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi11G000863 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi11G000863 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L0M4\|A0A0A0L0M4_CUCSA	1.1e-31	71.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374620 PE=4 SV=1	[more]
tr\|A0A0A0KYM4\|A0A0A0KYM4_CUCSA	2.2e-27	68.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G375140 PE=4 SV=1	[more]
tr\|A0A0A0L399\|A0A0A0L399_CUCSA	1.4e-21	59.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374640 PE=4 SV=1	[more]
tr\|A0A1S4DZT7\|A0A1S4DZT7_CUCME	1.1e-07	43.48	uncharacterized PE-PGRS family protein PE_PGRS33 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Bhi11G000863 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54594.1	1.7e-31	71.30	hypothetical protein Csa_4G374620 [Cucumis sativus]	[more]
KGN54598.1	3.4e-27	68.63	hypothetical protein Csa_4G375140 [Cucumis sativus]	[more]
KGN54596.1	2.1e-21	59.26	hypothetical protein Csa_4G374640 [Cucumis sativus]	[more]
XP_016901486.1	1.7e-07	43.48	PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS33, partial [Cucumis me...	[more]
GAU30557.1	8.9e-04	44.44	hypothetical protein TSUD_65670 [Trifolium subterraneum]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi11M000863	Bhi11M000863	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi11G000863	ClCG10G009580	Watermelon (Charleston Gray)	wcgwgoB078
Bhi11G000863	CmaCh16G002710	Cucurbita maxima (Rimu)	cmawgoB0410
Bhi11G000863	CmoCh16G002910	Cucurbita moschata (Rifu)	cmowgoB0405
Bhi11G000863	Lsi03G009680	Bottle gourd (USVL1VR-Ls)	lsiwgoB292
Bhi11G000863	Carg19731	Silver-seed gourd	carwgoB0381

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi11G000863	Cucumber (Gy14) v1	cgywgoB443
Bhi11G000863	Cucumber (Gy14) v2	cgybwgoB619
Bhi11G000863	Cucurbita maxima (Rimu)	cmawgoB0634
Bhi11G000863	Cucurbita maxima (Rimu)	cmawgoB0814
Bhi11G000863	Cucurbita moschata (Rifu)	cmowgoB0635
Bhi11G000863	Cucurbita moschata (Rifu)	cmowgoB0810
Bhi11G000863	Cucurbita pepo (Zucchini)	cpewgoB0266
Bhi11G000863	Cucurbita pepo (Zucchini)	cpewgoB0311
Bhi11G000863	Cucurbita pepo (Zucchini)	cpewgoB0477
Bhi11G000863	Wild cucumber (PI 183967)	cpiwgoB659
Bhi11G000863	Cucumber (Chinese Long) v3	cucwgoB674
Bhi11G000863	Cucumber (Chinese Long) v2	cuwgoB651
Bhi11G000863	Melon (DHL92) v3.6.1	medwgoB200
Bhi11G000863	Melon (DHL92) v3.5.1	mewgoB198
Bhi11G000863	Watermelon (Charleston Gray)	wcgwgoB010
Bhi11G000863	Watermelon (97103) v2	wgowmbB001
Bhi11G000863	Watermelon (97103) v2	wgowmbB049
Bhi11G000863	Watermelon (97103) v1	wgowmB007
Bhi11G000863	Silver-seed gourd	carwgoB0375
Bhi11G000863	Silver-seed gourd	carwgoB0456