Bhi10G000329 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi10G000329
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Mitochondrial distribution and morphology protein 34
Location	chr10 : 9087521 .. 9089775 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAATTATTTTGTACCATTTTCCCTTCTTTTGCAATCTGGAAACGGCAATAAAACTGCAAATTTGAGATCAAAGAACCTTAAAACTTGAACTTTGAAGGACTGAGGATGAAAATTTCAGAGCTTTCAAATCCAACGAATACTGCAGATTGCAAGGACAGGCCCCAAAAGCCCCAGTTCAGGCCTGCTAAAGATGATACCAAGCTTGTTCTCCAAGATCCGGTTCTCCCTTTCCCAAATTAACTCTTACTACTAATTCTTTCCTTCTACTTTCGTTCTTGAATTTTGTTGTATCAATGTCCACCATCTGAAGATTGTTCCCATTTCTTTCTTTTGCTATAGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCGATTTTTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGAAAGAAAAATGTTAAATTTCTTATTTTCATGTTATGCCTGTTCTTGTTGGTCCATGCCATGAATTATCACGTTGTGAAATATCGAACATTTAATGAAAATAGAAGTCCATTAGTTTCTATGGAGACTAGTAATAGAATTCCCACTATCCACTTGAATCCAAATTTGCTTATAAGTTATATAACTTTTTACTTTGGTGTTACAAAAGAATGGTGATCCTCATTAGTCATCAATGACATGATCGTGCGTGCCAAGTATTCGACGAAATGCTTAAGTGGGAAGTAAGCTTTGAGACGACCAATTTACTTTTTTCTACAGACGCCTACAAGTGTTGATTTGTCTCTGTCCGTTCGGACTGATGAAAGACAACCGGGAGAGGCTTTTGGATCATTCAGTGCTGATTCTAATCTCCATAACCAAATGAGAGAAGATACAGGTACGCCCACGCTATCTATATGTCCTCTTGCTTCATCGGCTTCCAAAATGCAAAATTTTGGGCATTTATATACTTGTTTAGATGAACCTCATTTACTTTGAAATGGAATTACAGTTTGGCTCAAGCCAAGCGTCCAAACTGGCCATATTTTTTAGAACTCAACTAATAGTTGTACAACTTATAGAACAAATCCTATTCAAGTAAGAAGGTTTTTTTGATACAAGCTGATCTTAGTTGATCTGATACCGGAGTTCAATGGTAGAGTTCAGCTAAATCTAGTTGGTCTAAGTCAAAGGCAAACCAAATCCCGGACTCCTCATATCACCACCCAAATTAGGCTAGTTCACGAACCCTTTTGGTGTGGGGCTTCATGTAAGCTTACTCTCACTTATCAACAATCAATACATTAGCAATGACTGTCCGTAAACAAACCATAGTGAAAAGGTCTTATAAAGATGCACCCATTGTCGAAACTGTTAGGTGTAAACAAAGTCTCACATTTGTTGAGAATGAGAATGATCATGAGTATACAAATTTGGACCATTATCTTCGTTGGTATGAGGCCTTTTGAGTGGTTCTAAAAGCAAAGTCTTGAGGGTTTATGTTCAAAGTGGATTATATCATACTATTGTGGAGATGAGTGGAGGTTCCATTGACTTTATTATTCAACACATCGCATTTAATATCGTCCTGGTGGAGGTTCCATTGACTTTATTATGCCCACATCGCATTTAATATCGTCCTAGCTACTACCACCTATGACTAAATTGTGATGATTATGCTTCTCTTATTTACTGGTTAGGTTGAATATGCTTATTATTACTTTCAAGAACCCTGTCTTGCACAGTTCAAGTTTAATTTGACTGAAATATCAGAAAACATTGGTGTCTTGTCTAATAGCTTTACTGCTGCAAATGCTGTTTGATCACTTTCATCTTTGTTGCGATGTCATTGTTGGTTGATGCTAGCAATAGCATATATTGCGAATAAGCTTTACTCAGTTCAACAGCCAAGCTTTACTCAATTGTATTGAAAAGGGGAGGAGTTGATGAAATTATGTGGAGGAACAAG

mRNA sequence

CGGAATTATTTTGTACCATTTTCCCTTCTTTTGCAATCTGGAAACGGCAATAAAACTGCAAATTTGAGATCAAAGAACCTTAAAACTTGAACTTTGAAGGACTGAGGATGAAAATTTCAGAGCTTTCAAATCCAACGAATACTGCAGATTGCAAGGACAGGCCCCAAAAGCCCCAGTTCAGGCCTGCTAAAGATGATACCAAGCTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCGATTTTTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGAAAGAAAAATGTTAAATTTCTTATTTTCATGTTATGCCTGTTCTTGTTGGTCCATGCCATGAATTATCACGTTGTGAAATATCGAACATTTAATGAAAATAGAAGTCCATTAGTTTCTATGGAGACTAGTAATAGAATTCCCACTATCCACTTGAATCCAAATTTGCTTATAAGTTATATAACTTTTTACTTTGGTGTTACAAAAGAATGGTGATCCTCATTAGTCATCAATGACATGATCGTGCGTGCCAAGTATTCGACGAAATGCTTAAGTGGGAAGTAAGCTTTGAGACGACCAATTTACTTTTTTCTACAGACGCCTACAAGTGTTGATTTGTCTCTGTCCGTTCGGACTGATGAAAGACAACCGGGAGAGGCTTTTGGATCATTCAGTGCTGATTCTAATCTCCATAACCAAATGAGAGAAGATACAGCATATATTGCGAATAAGCTTTACTCAGTTCAACAGCCAAGCTTTACTCAATTGTATTGAAAAGGGGAGGAGTTGATGAAATTATGTGGAGGAACAAG

Coding sequence (CDS)

ATGAAAATTTCAGAGCTTTCAAATCCAACGAATACTGCAGATTGCAAGGACAGGCCCCAAAAGCCCCAGTTCAGGCCTGCTAAAGATGATACCAAGCTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCGATTTTTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGA

Protein sequence

MKISELSNPTNTADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFDFSVPKSKNPSQMG

Homology

[Close]

BLAST of Bhi10G000329 vs. TAIR10
Match: AT2G20480.1 (unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 3.8e-10
Identity = 32/45 (71.11%), Postives = 34/45 (75.56%), Query Frame = 0


Query: 18 RPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFDFSVP 63
          + QKP FRPA DDTK VLQDPI RSDP+ETEEAVLR P F    P
Sbjct: 16 KTQKPPFRPAVDDTKPVLQDPILRSDPMETEEAVLRLPSFPMIRP 60

[Close]

BLAST of Bhi10G000329 vs. TrEMBL
Match: tr|A0A0A0KWV8|A0A0A0KWV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.1e-27
Identity = 61/71 (85.92%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MKISELSNPTNTADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFDFS 60
          MK SELS+P+NT +CK+RPQKP FRPAKDDTKL+LQDPIRRSDPIETEEAVLRPPPF FS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

[Close]

BLAST of Bhi10G000329 vs. TrEMBL
Match: tr|W9QLE6|W9QLE6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-10
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1  MKISELS-NPTNT-ADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFD 60
          MK SE S  P+N     +++P KP FRPAKDDTK +LQDPI RSDPIETEEAVLR PPF 
Sbjct: 1  MKASESSVKPSNNYPQNREKPTKPSFRPAKDDTKPILQDPILRSDPIETEEAVLRLPPFP 60

Query: 61 FSVPKSKNP 68
          F+  ++ NP
Sbjct: 61 FA--RTTNP 67

[Close]

BLAST of Bhi10G000329 vs. TrEMBL
Match: tr|A0A1U7ZV42|A0A1U7ZV42_NELNU (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.7e-10
Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1  MKISELSNPTN-----TADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPP 58
          MK SE+   T+     T    D+PQKP FRPAKDDTK +LQDPI RSDPIETEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

[Close]

BLAST of Bhi10G000329 vs. TrEMBL
Match: tr|A0A1Q3CXU0|A0A1Q3CXU0_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.6e-10
Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = 0


Query: 1  MKISELSNPTNTADCK-----DRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPP 60
          M+ +E+S  +N+   +     D+PQKP FRPAKDDTK  L DP+ RSDPIETEEAVLR P
Sbjct: 1  MRATEISKKSNSNSNQSQLKTDKPQKPPFRPAKDDTKPALHDPLLRSDPIETEEAVLRLP 60

Query: 61 PFDFSVPK 64
          PF    PK
Sbjct: 61 PFPVIKPK 68

[Close]

BLAST of Bhi10G000329 vs. TrEMBL
Match: tr|A0A151U4V3|A0A151U4V3_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_006966 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-09
Identity = 40/66 (60.61%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 5  ELSNPTNTADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFDFSVPKS 64
          E  N T          KP F+PAKDDTK +LQDPI RSDPIETEEAVLR PP  FS+P S
Sbjct: 33 ETMNKTVLPQSSSNKPKPPFKPAKDDTKPMLQDPILRSDPIETEEAVLRLPP--FSIPTS 92

Query: 65 KNPSQM 71
           +P QM
Sbjct: 93 TSPPQM 96

[Close]

BLAST of Bhi10G000329 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_4G280670 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-26
Identity = 61/71 (85.92%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  MKISELSNPTNTADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFDFS 60
          MK SELS+P+NT +CK+RPQKP FRPAKDDTKL+LQDPIRRSDPIETEEAVLRPPPF FS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

[Close]

BLAST of Bhi10G000329 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima])

HSP 1 Score: 118.6 bits (296), Expect = 8.5e-24
Identity = 61/74 (82.43%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 1  MKISELS---NPTNTADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          M+ SELS   NPTN A+CKDRP KP FRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 DFSVPKSKNPSQMG 72
           FSV KSKN S+MG
Sbjct: 71 QFSVSKSKNSSKMG 84

[Close]

BLAST of Bhi10G000329 vs. NCBI nr
Match: XP_023919605.1 (uncharacterized protein LOC112031151 [Quercus suber])

HSP 1 Score: 77.0 bits (188), Expect = 2.8e-11
Identity = 45/71 (63.38%), Postives = 49/71 (69.01%), Query Frame = 0


Query: 1  MKISEL---SNPTNTADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          MKISE+   SN  N     ++P KP FRPA+DDTK VLQDPI RSDPIETEEAVLR PP 
Sbjct: 1  MKISEISMKSNNNNGQSSSEKPSKPHFRPAQDDTKPVLQDPILRSDPIETEEAVLRLPP- 60

Query: 61 DFSVPKSKNPS 69
           F V    NPS
Sbjct: 61 -FPVTSRSNPS 69

[Close]

BLAST of Bhi10G000329 vs. NCBI nr
Match: XP_010090705.1 (uncharacterized protein LOC21396893 [Morus notabilis] >EXB40424.1 hypothetical protein L484_013727 [Morus notabilis])

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-10
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0


Query: 1  MKISELS-NPTNT-ADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFD 60
          MK SE S  P+N     +++P KP FRPAKDDTK +LQDPI RSDPIETEEAVLR PPF 
Sbjct: 1  MKASESSVKPSNNYPQNREKPTKPSFRPAKDDTKPILQDPILRSDPIETEEAVLRLPPFP 60

Query: 61 FSVPKSKNP 68
          F+  ++ NP
Sbjct: 61 FA--RTTNP 67

[Close]

BLAST of Bhi10G000329 vs. NCBI nr
Match: XP_010257524.1 (PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera])

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-10
Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 1  MKISELSNPTN-----TADCKDRPQKPQFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPP 58
          MK SE+   T+     T    D+PQKP FRPAKDDTK +LQDPI RSDPIETEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

The following BLAST results are available for this feature:

BLAST of Bhi10G000329 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20480.1	3.8e-10	71.11	unknown protein	[more]

BLAST of Bhi10G000329 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi10G000329 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWV8\|A0A0A0KWV8_CUCSA	7.1e-27	85.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1	[more]
tr\|W9QLE6\|W9QLE6_9ROSA	1.2e-10	62.32	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1	[more]
tr\|A0A1U7ZV42\|A0A1U7ZV42_NELNU	2.7e-10	66.13	uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593...	[more]
tr\|A0A1Q3CXU0\|A0A1Q3CXU0_CEPFO	4.6e-10	57.35	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4...	[more]
tr\|A0A151U4V3\|A0A151U4V3_CAJCA	1.0e-09	60.61	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_006966 PE=4 SV=1	[more]

BLAST of Bhi10G000329 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54090.1	1.1e-26	85.92	hypothetical protein Csa_4G280670 [Cucumis sativus]	[more]
XP_022995760.1	8.5e-24	82.43	uncharacterized protein LOC111491196 [Cucurbita maxima]	[more]
XP_023919605.1	2.8e-11	63.38	uncharacterized protein LOC112031151 [Quercus suber]	[more]
XP_010090705.1	1.8e-10	62.32	uncharacterized protein LOC21396893 [Morus notabilis] >EXB40424.1 hypothetical p...	[more]
XP_010257524.1	4.1e-10	66.13	PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi10M000329	Bhi10M000329	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	PANTHER	PTHR37207	FAMILY NOT NAMED	coord: 1..59

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi10G000329	Csa4G280670	Cucumber (Chinese Long) v2	cuwgoB390
Bhi10G000329	MELO3C014663	Melon (DHL92) v3.5.1	mewgoB484
Bhi10G000329	ClCG02G023850	Watermelon (Charleston Gray)	wcgwgoB283
Bhi10G000329	CSPI04G13180	Wild cucumber (PI 183967)	cpiwgoB394
Bhi10G000329	Cucsa.153340	Cucumber (Gy14) v1	cgywgoB298
Bhi10G000329	CmaCh02G012110	Cucurbita maxima (Rimu)	cmawgoB0757
Bhi10G000329	CmoCh02G012450	Cucurbita moschata (Rifu)	cmowgoB0747
Bhi10G000329	Lsi10G009860	Bottle gourd (USVL1VR-Ls)	lsiwgoB079
Bhi10G000329	Cp4.1LG05g05230	Cucurbita pepo (Zucchini)	cpewgoB0944
Bhi10G000329	CsGy4G012750	Cucumber (Gy14) v2	cgybwgoB373
Bhi10G000329	Carg02746	Silver-seed gourd	carwgoB1067
Bhi10G000329	CsaV3_4G023520	Cucumber (Chinese Long) v3	cucwgoB396
Bhi10G000329	Cla003182	Watermelon (97103) v1	wgowmB378
Bhi10G000329	Cla97C02G050000	Watermelon (97103) v2	wgowmbB353

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi10G000329	Cucurbita maxima (Rimu)	cmawgoB0693
Bhi10G000329	Cucurbita moschata (Rifu)	cmowgoB0687
Bhi10G000329	Cucurbita pepo (Zucchini)	cpewgoB0354
Bhi10G000329	Melon (DHL92) v3.6.1	medwgoB485
Bhi10G000329	Silver-seed gourd	carwgoB0629