Cla97C02G050000 (gene) Watermelon (97103) v2

NameCla97C02G050000
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionMitochondrial distribution and morphology protein 34
LocationCla97Chr02 : 37322848 .. 37323194 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCGTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGGTTCTCTCTCTCCCAAATTAACTCTTACCACTAATTCCTTCCTTCTACTTTCATTCTACTTTCATTCTTGAATTTTGTTGTACCAATGTGCACCTACTGAAGATTGTTCCCATTTCTTTCTTTTGCTATAGATACGGAGGTCAGATCCAATTGACACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGA

mRNA sequence

ATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCGTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGA

Coding sequence (CDS)

ATGAAAGCTTCAGAGCTTTCAACTCCAACGAATGCCGTAGAATGCAAGGACAGGCCCCAAAAACCGCCGTTCAGGCCTGCTAAAGACGACACCAAGCTCCTTCTTCAAGATCCGATACGGAGGTCAGATCCAATTGACACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCATTTCTCTGTTCCGAAATCAAAGAACCCTTCTCAAATGGGGTGA

Protein sequence

MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFSVPKSKNPSQMG
BLAST of Cla97C02G050000 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_4G280670 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-29
Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0

Query: 1  MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFS 60
          MKASELS+P+N VECK+RPQKPPFRPAKDDTKLLLQDPIRRSDPI+TEEAVLRPPPFHFS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

BLAST of Cla97C02G050000 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima])

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-24
Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0

Query: 1  MKASELST---PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          M+ SELST   PTNA ECKDRP KPPFRPAKDDTKL+LQDPIRRSDPI+TEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 HFSVPKSKNPSQMG 72
           FSV KSKN S+MG
Sbjct: 71 QFSVSKSKNSSKMG 84

BLAST of Cla97C02G050000 vs. NCBI nr
Match: XP_010257524.1 (PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera])

HSP 1 Score: 76.3 bits (186), Expect = 4.8e-11
Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0

Query: 1  MKASELSTPTNAVE-----CKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 58
          MK SE+   T+  E       D+PQKPPFRPAKDDTK +LQDPI RSDPI+TEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

BLAST of Cla97C02G050000 vs. NCBI nr
Match: XP_016556081.1 (PREDICTED: uncharacterized protein LOC107855576 [Capsicum annuum])

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10
Identity = 44/69 (63.77%), Postives = 50/69 (72.46%), Query Frame = 0

Query: 1  MKASE---LSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          MKA E    S+ TN  E K +  KPPFRPAKDDTK LLQDPI RSDPI+TEEA+LR PPF
Sbjct: 4  MKADEESRKSSNTNKSEVK-KVTKPPFRPAKDDTKPLLQDPILRSDPIETEEALLRLPPF 63

Query: 61 HFSVPKSKN 67
              PKS++
Sbjct: 64 PICKPKSQS 71

BLAST of Cla97C02G050000 vs. NCBI nr
Match: GAV84888.1 (hypothetical protein CFOL_v3_28330 [Cephalotus follicularis])

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 1  MKASELSTPTNAVECK-----DRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 60
          M+A+E+S  +N+   +     D+PQKPPFRPAKDDTK  L DP+ RSDPI+TEEAVLR P
Sbjct: 1  MRATEISKKSNSNSNQSQLKTDKPQKPPFRPAKDDTKPALHDPLLRSDPIETEEAVLRLP 60

Query: 61 PFHFSVPK 64
          PF    PK
Sbjct: 61 PFPVIKPK 68

BLAST of Cla97C02G050000 vs. TrEMBL
Match: tr|A0A0A0KWV8|A0A0A0KWV8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 8.9e-30
Identity = 65/71 (91.55%), Postives = 70/71 (98.59%), Query Frame = 0

Query: 1  MKASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFHFS 60
          MKASELS+P+N VECK+RPQKPPFRPAKDDTKLLLQDPIRRSDPI+TEEAVLRPPPFHFS
Sbjct: 1  MKASELSSPSNTVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPFHFS 60

Query: 61 VPKSKNPSQMG 72
          +PKSKNPSQMG
Sbjct: 61 LPKSKNPSQMG 71

BLAST of Cla97C02G050000 vs. TrEMBL
Match: tr|A0A1U7ZV42|A0A1U7ZV42_NELNU (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.2e-11
Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0

Query: 1  MKASELSTPTNAVE-----CKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 58
          MK SE+   T+  E       D+PQKPPFRPAKDDTK +LQDPI RSDPI+TEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

BLAST of Cla97C02G050000 vs. TrEMBL
Match: tr|W9QLE6|W9QLE6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.3e-11
Identity = 42/69 (60.87%), Postives = 51/69 (73.91%), Query Frame = 0

Query: 1  MKASELST--PTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPFH 60
          MKASE S     N  + +++P KP FRPAKDDTK +LQDPI RSDPI+TEEAVLR PPF 
Sbjct: 1  MKASESSVKPSNNYPQNREKPTKPSFRPAKDDTKPILQDPILRSDPIETEEAVLRLPPFP 60

Query: 61 FSVPKSKNP 68
          F+  ++ NP
Sbjct: 61 FA--RTTNP 67

BLAST of Cla97C02G050000 vs. TrEMBL
Match: tr|A0A1U8FBL6|A0A1U8FBL6_CAPAN (uncharacterized protein LOC107855576 OS=Capsicum annuum OX=4072 GN=LOC107855576 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.3e-11
Identity = 44/69 (63.77%), Postives = 50/69 (72.46%), Query Frame = 0

Query: 1  MKASE---LSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 60
          MKA E    S+ TN  E K +  KPPFRPAKDDTK LLQDPI RSDPI+TEEA+LR PPF
Sbjct: 4  MKADEESRKSSNTNKSEVK-KVTKPPFRPAKDDTKPLLQDPILRSDPIETEEALLRLPPF 63

Query: 61 HFSVPKSKN 67
              PKS++
Sbjct: 64 PICKPKSQS 71

BLAST of Cla97C02G050000 vs. TrEMBL
Match: tr|A0A1Q3CXU0|A0A1Q3CXU0_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.3e-11
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 0

Query: 1  MKASELSTPTNAVECK-----DRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPP 60
          M+A+E+S  +N+   +     D+PQKPPFRPAKDDTK  L DP+ RSDPI+TEEAVLR P
Sbjct: 1  MRATEISKKSNSNSNQSQLKTDKPQKPPFRPAKDDTKPALHDPLLRSDPIETEEAVLRLP 60

Query: 61 PFHFSVPK 64
          PF    PK
Sbjct: 61 PFPVIKPK 68

BLAST of Cla97C02G050000 vs. TAIR10
Match: AT2G20480.1 (unknown protein)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-10
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0

Query: 2  KASELSTPTNAVECKDRPQKPPFRPAKDDTKLLLQDPIRRSDPIDTEEAVLRPPPF 58
          K++E     NA     + QKPPFRPA DDTK +LQDPI RSDP++TEEAVLR P F
Sbjct: 3  KSTETPARPNATV---KTQKPPFRPAVDDTKPVLQDPILRSDPMETEEAVLRLPSF 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN54090.11.3e-2991.55hypothetical protein Csa_4G280670 [Cucumis sativus][more]
XP_022995760.11.7e-2482.43uncharacterized protein LOC111491196 [Cucurbita maxima][more]
XP_010257524.14.8e-1166.13PREDICTED: uncharacterized protein LOC104597593 [Nelumbo nucifera][more]
XP_016556081.11.4e-1063.77PREDICTED: uncharacterized protein LOC107855576 [Capsicum annuum][more]
GAV84888.11.4e-1058.82hypothetical protein CFOL_v3_28330 [Cephalotus follicularis][more]
Match NameE-valueIdentityDescription
tr|A0A0A0KWV8|A0A0A0KWV8_CUCSA8.9e-3091.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1[more]
tr|A0A1U7ZV42|A0A1U7ZV42_NELNU3.2e-1166.13uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593... [more]
tr|W9QLE6|W9QLE6_9ROSA9.3e-1160.87Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1[more]
tr|A0A1U8FBL6|A0A1U8FBL6_CAPAN9.3e-1163.77uncharacterized protein LOC107855576 OS=Capsicum annuum OX=4072 GN=LOC107855576 ... [more]
tr|A0A1Q3CXU0|A0A1Q3CXU0_CEPFO9.3e-1158.82Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28330 PE=4... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT2G20480.12.9e-1060.71unknown protein[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C02G050000.1Cla97C02G050000.1mRNA


Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..48
NoneNo IPR availablePANTHERPTHR37207FAMILY NOT NAMEDcoord: 1..58

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C02G050000Cucurbita maxima (Rimu)cmawmbB577
Cla97C02G050000Cucurbita moschata (Rifu)cmowmbB557
Cla97C02G050000Melon (DHL92) v3.6.1medwmbB368
Cla97C02G050000Wax gourdwgowmbB567
Cla97C02G050000Silver-seed gourdcarwmbB0543