Bhi09G002389 (gene) Wax gourd

NameBhi09G002389
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionCobalt ion-binding protein
Locationchr9 : 75715472 .. 75719626 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAAGAAAAAAAGAAAAAAAGAAGACAGAATTAGAAACAAAAGATGGCACATGATTGGATTGTTGTATAATGTGAAGAATGGTGGTCGTAGATTTGGACCCAAATCTAATCTACGATGCAAGTGTTGGGAAATAGCAGCACAACCCCAATTCATTTTCCAAACATTTTAATAGGAAAGCAAGCCTGTCTGGTTCTACTTCAGTATTCGATGTGTTTGGCTGTCTGAGACCAGAACTACATATTGGGATCTCAACCCACTTAACCAAAACACAGACAAAAAAAGGAAAAGGTATAAATTTTTCAACATGGGCATGGAATCACTTTTTGCATTACAATCAAAATTTGAATGAAGAACAGTATGATATAACATAACTGACATCATTTACCAATGTGTCTAGGAAAGGCAATAATGCACACAGTCAACTCAGTTAATATGTTTGAAATGACTTTCTAACAAGTTTGAAGTGCTTAGAATGTTTTCAAGAACTTTGAAAGAAAGAAGCCATTATCGGGTTAAATTTGTGAGAGAATCTGTATATAAGAATCGTATTCTTCTTGTTCCAGAAACGATGCAAGGTTCTGTTCTTGCTCGACTTTGTTATGTATTCTTCTTAGTGCTTTCAATGTTTTCTCTTATGAAATCAAACCTCAAATGAATTTTCTTATGCTTTCAATTTCTCTTCAAGAGGTTTCGATCGAAAAGCAGAAAAACCCACTTACCCACTTGAGTTTTCTTCAAAATTTGAACTTCAATGGAGGTTGGTGACGATCCGTACGGTTTGGTCAAAGAAGAAATGTAGGTGGTCAAACTCCATTTCTATATACTGGATGACAAGTTGTAACCATTTGAAAACAAACTATGAGATTGATCTGGAAGACCCAATAACTTCCTAAGCCCACTTCAAAATAAAAGCCCATGATGAAAAACCCTTGATCAGACAAACTATCTACATCAATTTCAATTCCCCCTCCCAAGAGTTAGGTGAGGGAGAGAAAATTAAGCTGTTATTTCAAGTTGTAGAGAGCAACCCAAGCCGCCGCGCAAATTTTATGATCAAGAACTGCATCAAATTTGGCTCCGGCGACGTTAACATCAAGGTCCTGCCCTTGCCCAAAGATGAAACTTATTTGCTGAGGTCTGTAGCTTTCTGACCTTTTGAACTTTTGAGATATTTACAGATTTTTCTTTTCTTAAAACCATTACAGATCTATCGAAGGAAGCTTAAACGTGTGTGGATCTAATCGGATCTGAAATCCGAAAATCATCGGGAGCAAAATATTCGGTGTGGTCGGATAAATTGAAGGTTGGTTTGATCTATAACGCCTCTGCTGCTCACCTTCACTAAATTCATTCTTTCTACCATGTACATCTGCATCTGCTTTATACGTTTGGTTGCTGGTTTCTAATTGTGTGTGACTTCATTATACATATGTGCAATATTTTCTCCCATGGCAATGATTAAAATCAATCGTAGAGGGCCATTTAGACAAGTCTACAGTTAGTTTAGGCAATTTAGTATAAACAATTTCAAGTGGATGCTTCCCTGTGTGTGAGGGATTTTGTGTGTAGTTGAATGTGACCACAGCTTGATGCAGTCATATGCTCCACTGTTTTGATTTTGGCTGCTAAAGGACCTTATTAAGTTGTCCAAAGTTATACTGATCACCTCTGTCTGGCCATCAGTCTGTGGATCACCAGCCTTTCTGTATCCATCCCATCTTATATGAGGAAGGGTGTGCGTCTGGTTTTAAGTTTAGTGTTCTAAATAGGGATTTTAACAACTTATTTTTCACTATTAACCACTATGAGTTAATGTAGTGGCCAATAAAAACCATGTAAATAATAAAAGACTTAGAGGGAATGAAATCAAACTATAGTGGCTAGTTGACCACTCACCTAGGATTAATATCTTATGAGTTCCCTTAGCAACTAAATGTTTTAGGGTCAAACAATTGTACTGGGGGTGCACACATGCTGGCCTGGACAATAAACACACACATATATATACAGCCTATGATTTCGTTAGTATTGCTAAGTTTTCCATCTATAACTACTTCCTCTTCTTATGAAAGTTGATCTTTCTCATCCCTTTATCATATGGCGCTTCTTCCTCTCATTTCTAAATTCTCACTCTCTGTTTGATTTTCTTCATCTATGTTTTCTGTTGTAGCCATTTTCTGCATTGTGGGCATTTGTTGGATATGTGCCCTTGTTGGCCACAGCAAAAACACTTTCTGGGTGTTACTTTGGCCTAGGGATATTGTGTTTTCTTTCTTTGGGATGATGCTCAGTTTTTTATAGGCTTGAAATTGTTTTCTTTTGTTTTGCTAAAAGGATTGGTGGAAGTACCACCTCTTTCAAATGTTATTTGGGATTTTGAATTGTTTCTTTGAGATTTATTATGATACTCCAGCTGAATCTTTCTCTTGCATTGGGGTTTTTGTGAATCTTGTTCTTGTTGTTCTGCTTCTATCGTAGTGACCAAATTTAATTTACAACTTCTTTTAATTTTTAAATAGGATATTGGGTGTAAAACTACTTAGTATTGTATAATTTTTCTTAATCTGGATATTTAACGACATAAAACTCTTCTGTATATCGTTCACGCTCCTATTTCCTTGTTTAAGGATACCTTCTATATAAAAGGTGTTCATAATTTATAGAGAGGAACCTTTCCCTCATGGGTTTTTGCATGGTCAGCCATGCCTTTATGAGAGCTTTTCTATTCTGTAATTGGTCCCACTGGATGCTCCTTTTCTTAATCTTAGCGCAACCAATTTTGACTTTGGTGCTTCTAAAGTCCCTGTCTAATCAAACAAAGTTTAAACATTTTTTTATCCAATCTTAAATAAGATACCATATCTCACTTCCCATCAATGTCAGGGAGTTTTACTTTCATTTTGAAGTCATTAAGTCGCTTGGAGTTGTTGTCCTAGAACCTCTTCCTCGCTAGAATCGGCTGGGATGGTATCTTTTGGTAGATCTTGATTGATTTGCAGGTTTGGATTTTGTCTAAAATGTCTTCTTTGTTGATGTGCAGGTTTATTAAATCCTTGAGGTCGTTCTTGAAGGCATTTTCTTTCGCGATTGTTGATCTTGTTGCTAGTGTGGATCACTGTTGCTGTCACCAAGACCTCAAATCGAATGCTCTAATTCTAGAGACATTTTAACTTAAAGTCATCGTTGGCTGCTCTGCTTCATCGTTATTATGGCTCTTCAAACCTATGCCCATTCCCAGCTCTCAAGGCCTCACCTCCCTGCATTATTGTCCCTGCCCTCTTCCTACACTACTAGTGAGATTCGACTCCCTGTAATTTCTACCGCTTCAAGACGACGCTATCTTCGTCTAGTCTGCTCCAGCAGTGATGCTAATAGTAGTAAGAAGGGAGTACCCAATTCCAACTATGTTGTTCCACTCAACAAATCTTTTTCCCCAGCTAACTCATCCTGCATTACTCGACCCCTTGCGGAGATCCTTCGCGATCTAAACAAGAGAATCCCTGATAACATCGCTCAGAAAGCCCCTCATTCTGACACCCATGATCGTGCTCCTGCGACATTCATCCCTTGGTTTCATGCTAATAGGATGCTGAGTTTCTACGCCCCTGGATGGTGTGGAGAAATACGAGATGTCATATTCTCTGACAATGGTGGTGTGACTGTGGTTTATCGTGTGACCGTTAGAGGATCGGATGGAGAGGCACACCGTGAATCAACTGGAACAGTATCGGCCACTGATAGCAATATTGAGGATCCTGTAGCTGCTGCGGAGGAAATAGCTTTTTGCAAGGCTTGTGCAAGATTTGGCCTTGGTTTGTATCTCTATCATGAAGAATGAATGCAGCAAATAACAAAAGAATGCGATGCTTCCATTCCAACATGTAATAAAGTTTTTTAGTCTCAATATTTTGTAGAAATGGATATATAATGTTGGCCTTGACACTTGAGAGGGTGTACATTAGTAGTTTTAGATGATTCCGTGGAGCTTGAACTTTTATAGCAGAGTCATATGTGGATACTTCCATGTTGCTGAGTTTATATCTTTTTAATTTACACGTACTCTGTTTCAGAGATGCCTTTTCAATTGTACCCTCTTGTGTTTATTTCATGATTACACTTTGAAATGGATCCTTCACAGTTGCTTTTTCTTTA

mRNA sequence

TGAAAAGAAAAAAAGAAAAAAAGAAGACAGAATTAGAAACAAAAGATGGCACATGATTGGATTGTTGTATAATGTGAAGAATGGTGGTCGTAGATTTGGACCCAAATCTAATCTACGATGCAAGTGTTGGGAAATAGCAGCACAACCCCAATTCATTTTCCAAACATTTTAATAGGAAAGCAAGCCTGTCTGGTTCTACTTCAGTATTCGATGTGTTTGGCTGTCTGAGACCAGAACTACATATTGGGATCTCAACCCACTTAACCAAAACACAGACAAAAAAAGGAAAAGGTATAAATTTTTCAACATGGGCATGGAATCACTTTTTGCATTACAATCAAAATTTGAATGAAGAACAGTATGATATAACATAACTGACATCATTTACCAATGTGTCTAGGAAAGGCAATAATGCACACAGTCAACTCAGTTAATATGTTTGAAATGACTTTCTAACAAGTTTGAAGTGCTTAGAATGTTTTCAAGAACTTTGAAAGAAAGAAGCCATTATCGGGTTAAATTTGTGAGAGAATCTGTATATAAGAATCGTATTCTTCTTGTTCCAGAAACGATGCAAGGTTCTGTTCTTGCTCGACTTTGTTATGTATTCTTCTTAGTGCTTTCAATGTTTTCTCTTATGAAATCAAACCTCAAATGAATTTTCTTATGCTTTCAATTTCTCTTCAAGAGGTTTCGATCGAAAAGCAGAAAAACCCACTTACCCACTTGAGTTTTCTTCAAAATTTGAACTTCAATGGAGGTTGGTGACGATCCGTACGGTTTGGTCAAAGAAGAAATGTAGGTGGTCAAACTCCATTTCTATATACTGGATGACAAGTTGTAACCATTTGAAAACAAACTATGAGATTGATCTGGAAGACCCAATAACTTCCTAAGCCCACTTCAAAATAAAAGCCCATGATGAAAAACCCTTGATCAGACAAACTATCTACATCAATTTCAATTCCCCCTCCCAAGAGTTAGGTGAGGGAGAGAAAATTAAGCTGTTATTTCAAGTTGTAGAGAGCAACCCAAGCCGCCGCGCAAATTTTATGATCAAGAACTGCATCAAATTTGGCTCCGGCGACGTTAACATCAAGATCTATCGAAGGAAGCTTAAACGTGTGTGGATCTAATCGGATCTGAAATCCGAAAATCATCGGGAGCAAAATATTCGGTGTGGTCGGATAAATTGAAGGTTTATTAAATCCTTGAGGTCGTTCTTGAAGGCATTTTCTTTCGCGATTGTTGATCTTGTTGCTAGTGTGGATCACTGTTGCTGTCACCAAGACCTCAAATCGAATGCTCTAATTCTAGAGACATTTTAACTTAAAGTCATCGTTGGCTGCTCTGCTTCATCGTTATTATGGCTCTTCAAACCTATGCCCATTCCCAGCTCTCAAGGCCTCACCTCCCTGCATTATTGTCCCTGCCCTCTTCCTACACTACTAGTGAGATTCGACTCCCTGTAATTTCTACCGCTTCAAGACGACGCTATCTTCGTCTAGTCTGCTCCAGCAGTGATGCTAATAGTAGTAAGAAGGGAGTACCCAATTCCAACTATGTTGTTCCACTCAACAAATCTTTTTCCCCAGCTAACTCATCCTGCATTACTCGACCCCTTGCGGAGATCCTTCGCGATCTAAACAAGAGAATCCCTGATAACATCGCTCAGAAAGCCCCTCATTCTGACACCCATGATCGTGCTCCTGCGACATTCATCCCTTGGTTTCATGCTAATAGGATGCTGAGTTTCTACGCCCCTGGATGGTGTGGAGAAATACGAGATGTCATATTCTCTGACAATGGTGGTGTGACTGTGGTTTATCGTGTGACCGTTAGAGGATCGGATGGAGAGGCACACCGTGAATCAACTGGAACAGTATCGGCCACTGATAGCAATATTGAGGATCCTGTAGCTGCTGCGGAGGAAATAGCTTTTTGCAAGGCTTGTGCAAGATTTGGCCTTGGTTTGTATCTCTATCATGAAGAATGAATGCAGCAAATAACAAAAGAATGCGATGCTTCCATTCCAACATGTAATAAAGTTTTTTAGTCTCAATATTTTGTAGAAATGGATATATAATGTTGGCCTTGACACTTGAGAGGGTGTACATTAGTAGTTTTAGATGATTCCGTGGAGCTTGAACTTTTATAGCAGAGTCATATGTGGATACTTCCATGTTGCTGAGTTTATATCTTTTTAATTTACACGTACTCTGTTTCAGAGATGCCTTTTCAATTGTACCCTCTTGTGTTTATTTCATGATTACACTTTGAAATGGATCCTTCACAGTTGCTTTTTCTTTA

Coding sequence (CDS)

ATGGCTCTTCAAACCTATGCCCATTCCCAGCTCTCAAGGCCTCACCTCCCTGCATTATTGTCCCTGCCCTCTTCCTACACTACTAGTGAGATTCGACTCCCTGTAATTTCTACCGCTTCAAGACGACGCTATCTTCGTCTAGTCTGCTCCAGCAGTGATGCTAATAGTAGTAAGAAGGGAGTACCCAATTCCAACTATGTTGTTCCACTCAACAAATCTTTTTCCCCAGCTAACTCATCCTGCATTACTCGACCCCTTGCGGAGATCCTTCGCGATCTAAACAAGAGAATCCCTGATAACATCGCTCAGAAAGCCCCTCATTCTGACACCCATGATCGTGCTCCTGCGACATTCATCCCTTGGTTTCATGCTAATAGGATGCTGAGTTTCTACGCCCCTGGATGGTGTGGAGAAATACGAGATGTCATATTCTCTGACAATGGTGGTGTGACTGTGGTTTATCGTGTGACCGTTAGAGGATCGGATGGAGAGGCACACCGTGAATCAACTGGAACAGTATCGGCCACTGATAGCAATATTGAGGATCCTGTAGCTGCTGCGGAGGAAATAGCTTTTTGCAAGGCTTGTGCAAGATTTGGCCTTGGTTTGTATCTCTATCATGAAGAATGA

Protein sequence

MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKGVPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIPWFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLYLYHEE
BLAST of Bhi09G002389 vs. Swiss-Prot
Match: sp|Q9FIJ4|RD522_ARATH (DNA repair RAD52-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RAD52-2 PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 6.6e-60
Identity = 123/193 (63.73%), Postives = 145/193 (75.13%), Query Frame = 0

Query: 20  LSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDAN----SSKKGVPNSNYVVPLNKSFS 79
           +S PS+   + I+L    T +  R +R  CS           KK VPNSNYVVP++K   
Sbjct: 14  ISSPST-AAARIKLSPFRTVAVNRGVR--CSGGGVGGGDAGKKKAVPNSNYVVPIDKF-- 73

Query: 80  PANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIPWFHANRMLSFYAPGW 139
            ++SS ITRPL EILRDLNK+IPDNI  K+    +   A + FIPW+HANRMLSFYAPGW
Sbjct: 74  -SSSSSITRPLIEILRDLNKKIPDNIV-KSHDPPSTSAATSGFIPWYHANRMLSFYAPGW 133

Query: 140 CGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKA 199
           CGE+RDVIFS+NG VTVVYR+T+RGSDGEAHRESTGTV+ TD +IEDPV AAEEIAFC+A
Sbjct: 134 CGEVRDVIFSENGNVTVVYRLTIRGSDGEAHRESTGTVTTTDDHIEDPVTAAEEIAFCRA 193

Query: 200 CARFGLGLYLYHE 209
           CARFGLGLYLYHE
Sbjct: 194 CARFGLGLYLYHE 199

BLAST of Bhi09G002389 vs. Swiss-Prot
Match: sp|Q9FVV7|RD521_ARATH (DNA repair RAD52-like protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RAD52-1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.2e-30
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 0

Query: 79  SSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIPWFHANRMLSFYAPGWCGE 138
           +S I+RPLAEIL++LNK++PD++ +    +   D     +IPW   NR+++ +AP W GE
Sbjct: 47  TSGISRPLAEILKELNKKVPDSVIR----TRVEDGCSIKYIPWHIVNRIMNMHAPEWSGE 106

Query: 139 IRDVIFSDNGG-VTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACA 198
           +R V +S +G  VTV YRVT+ G+D E  RESTGT S  D    D V  AE +AF +ACA
Sbjct: 107 VRSVTYSPDGNTVTVAYRVTLYGTDAEIFRESTGTTSVDDKGYGDAVQKAEAMAFRRACA 166

Query: 199 RFGLGLYLYHEE 210
           RFGLGL+LYHE+
Sbjct: 167 RFGLGLHLYHED 174

BLAST of Bhi09G002389 vs. TAIR10
Match: AT5G47870.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 231.9 bits (590), Expect = 3.7e-61
Identity = 123/193 (63.73%), Postives = 145/193 (75.13%), Query Frame = 0

Query: 20  LSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDAN----SSKKGVPNSNYVVPLNKSFS 79
           +S PS+   + I+L    T +  R +R  CS           KK VPNSNYVVP++K   
Sbjct: 14  ISSPST-AAARIKLSPFRTVAVNRGVR--CSGGGVGGGDAGKKKAVPNSNYVVPIDKF-- 73

Query: 80  PANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIPWFHANRMLSFYAPGW 139
            ++SS ITRPL EILRDLNK+IPDNI  K+    +   A + FIPW+HANRMLSFYAPGW
Sbjct: 74  -SSSSSITRPLIEILRDLNKKIPDNIV-KSHDPPSTSAATSGFIPWYHANRMLSFYAPGW 133

Query: 140 CGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKA 199
           CGE+RDVIFS+NG VTVVYR+T+RGSDGEAHRESTGTV+ TD +IEDPV AAEEIAFC+A
Sbjct: 134 CGEVRDVIFSENGNVTVVYRLTIRGSDGEAHRESTGTVTTTDDHIEDPVTAAEEIAFCRA 193

Query: 200 CARFGLGLYLYHE 209
           CARFGLGLYLYHE
Sbjct: 194 CARFGLGLYLYHE 199

BLAST of Bhi09G002389 vs. TAIR10
Match: AT1G71310.2 (cobalt ion binding)

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-31
Identity = 66/132 (50.00%), Postives = 90/132 (68.18%), Query Frame = 0

Query: 79  SSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIPWFHANRMLSFYAPGWCGE 138
           +S I+RPLAEIL++LNK++PD++ +    +   D     +IPW   NR+++ +AP W GE
Sbjct: 47  TSGISRPLAEILKELNKKVPDSVIR----TRVEDGCSIKYIPWHIVNRIMNMHAPEWSGE 106

Query: 139 IRDVIFSDNGG-VTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACA 198
           +R V +S +G  VTV YRVT+ G+D E  RESTGT S  D    D V  AE +AF +ACA
Sbjct: 107 VRSVTYSPDGNTVTVAYRVTLYGTDAEIFRESTGTTSVDDKGYGDAVQKAEAMAFRRACA 166

Query: 199 RFGLGLYLYHEE 210
           RFGLGL+LYHE+
Sbjct: 167 RFGLGLHLYHED 174

BLAST of Bhi09G002389 vs. TrEMBL
Match: tr|A0A0A0L5X0|A0A0A0L5X0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663650 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 5.9e-106
Identity = 195/209 (93.30%), Postives = 202/209 (96.65%), Query Frame = 0

Query: 1   MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKG 60
           MALQTYAHSQLS PHL AL S+ SSY+TSEIRLP+ ST SRRR+LRLVCSSSDANS+KKG
Sbjct: 1   MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIP 120
           VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDT+DR+PATFIP
Sbjct: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNG VTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 209

BLAST of Bhi09G002389 vs. TrEMBL
Match: tr|A0A1S4DZ99|A0A1S4DZ99_CUCME (uncharacterized protein LOC103493818 OS=Cucumis melo OX=3656 GN=LOC103493818 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.5e-104
Identity = 193/209 (92.34%), Postives = 198/209 (94.74%), Query Frame = 0

Query: 1   MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKG 60
           MALQTYAHSQL  PH  AL S+ SSY+TSEIRLP+ ST SRR +LRLVCSSSDANSSKKG
Sbjct: 1   MALQTYAHSQLLGPHPTALSSIHSSYSTSEIRLPLSSTTSRRPHLRLVCSSSDANSSKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIP 120
           VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDR+P TFIP
Sbjct: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRSPTTFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNG VTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 209

BLAST of Bhi09G002389 vs. TrEMBL
Match: tr|A0A1R3J5C8|A0A1R3J5C8_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07532 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.1e-66
Identity = 133/191 (69.63%), Postives = 153/191 (80.10%), Query Frame = 0

Query: 24  SSYTTSEIRLPVISTASRRRYLRLVCSSSDANSS---KK--GVPNSNYVVPLNKSFSPAN 83
           ++Y    + +       R RY  LV  S + NSS   KK  GVPNSNYVVPL+KSFSP+N
Sbjct: 38  TNYWNGRLEVRRAGGRGRARYGGLVHCSGNNNSSGDAKKGGGVPNSNYVVPLDKSFSPSN 97

Query: 84  SSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIPWFHANRMLSFYAPGWCGE 143
           SSCITRPL EILRDLNKRIPDNI +  P S +     +TF+PW+HANRMLSFYAPGWCGE
Sbjct: 98  SSCITRPLVEILRDLNKRIPDNIIKPLPKSSS-----STFLPWYHANRMLSFYAPGWCGE 157

Query: 144 IRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACAR 203
           +RDVIF+DNG +TVVYR+T+RGSDGEAHRESTGTVS++D NI DPVAAAEEIAFC+ACAR
Sbjct: 158 VRDVIFADNGTITVVYRLTIRGSDGEAHRESTGTVSSSDVNIVDPVAAAEEIAFCRACAR 217

Query: 204 FGLGLYLYHEE 210
           FGLGLYLYHEE
Sbjct: 218 FGLGLYLYHEE 223

BLAST of Bhi09G002389 vs. TrEMBL
Match: tr|A0A2I4FC08|A0A2I4FC08_9ROSI (uncharacterized protein LOC108997396 OS=Juglans regia OX=51240 GN=LOC108997396 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.0e-65
Identity = 149/229 (65.07%), Postives = 167/229 (72.93%), Query Frame = 0

Query: 1   MALQTYA-HSQLSRPHLPAL-LSLPSSYTTSEIRLPVIS-----TASRRRYLRLVCSSSD 60
           MA+Q+   H  L +  LP+  LS   S   S++ L  +      +  RR  L+LV  + D
Sbjct: 1   MAVQSITNHPFLIKSPLPSFSLSSYLSKCDSDLGLVRVGPQKRCSGRRRDSLKLVVCALD 60

Query: 61  ----ANSS-------KKGVPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIA 120
               +NSS       K GVPNSNYVVPL+KSFSP NSSCITRPL EILRDLNKRIPDNI 
Sbjct: 61  RTNGSNSSGGGDGVKKGGVPNSNYVVPLDKSFSPTNSSCITRPLVEILRDLNKRIPDNII 120

Query: 121 QKA--PHSDTHDRAPATFIPWFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRG 180
           +    PH D  +   ATFIPWFHANRMLSFYAPGWCGEIRDVIF+DNG VTVVYRVT+RG
Sbjct: 121 KNTSPPHDDHAE--TATFIPWFHANRMLSFYAPGWCGEIRDVIFADNGSVTVVYRVTIRG 180

Query: 181 SDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           SDGEAHRESTGTVS  D +I DPVAAAEEIAFC+ACARFGLGLYLYHEE
Sbjct: 181 SDGEAHRESTGTVSPVDGHILDPVAAAEEIAFCRACARFGLGLYLYHEE 227

BLAST of Bhi09G002389 vs. TrEMBL
Match: tr|A0A1U8HQ21|A0A1U8HQ21_GOSHI (uncharacterized protein LOC107888517 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107888517 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.9e-65
Identity = 129/174 (74.14%), Postives = 150/174 (86.21%), Query Frame = 0

Query: 41  RRRYLRLV-CSSSDANS----SKKGVPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNK 100
           R R++ LV C+S  +N+    +KKGVPNSNYVVPLNKSFS +NSS ITRPL EILRDLNK
Sbjct: 41  RSRFIGLVHCNSRSSNNGSSDAKKGVPNSNYVVPLNKSFSASNSSYITRPLVEILRDLNK 100

Query: 101 RIPDNIAQKAPHSDTHDRAPATFIPWFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYR 160
           RIPDNI +  P SD    + +TF+PW+HANRMLSFYAPGWCGE+RDVIFS+NG +TVVYR
Sbjct: 101 RIPDNIVK--PPSD----SSSTFLPWYHANRMLSFYAPGWCGEVRDVIFSENGTITVVYR 160

Query: 161 VTVRGSDGEAHRESTGTVSATDSNIEDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           +TVRGSDGEAHRESTGTVS +D++IEDPV AAEEIAFC+ACARFGLGLYLYHE+
Sbjct: 161 LTVRGSDGEAHRESTGTVSLSDTDIEDPVGAAEEIAFCRACARFGLGLYLYHEK 208

BLAST of Bhi09G002389 vs. NCBI nr
Match: XP_004145544.1 (PREDICTED: uncharacterized protein LOC101203655 [Cucumis sativus] >KGN55506.1 hypothetical protein Csa_4G663650 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 8.9e-106
Identity = 195/209 (93.30%), Postives = 202/209 (96.65%), Query Frame = 0

Query: 1   MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKG 60
           MALQTYAHSQLS PHL AL S+ SSY+TSEIRLP+ ST SRRR+LRLVCSSSDANS+KKG
Sbjct: 1   MALQTYAHSQLSGPHLTALSSILSSYSTSEIRLPLTSTTSRRRHLRLVCSSSDANSNKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIP 120
           VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDT+DR+PATFIP
Sbjct: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTNDRSPATFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNG VTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 209

BLAST of Bhi09G002389 vs. NCBI nr
Match: XP_008452970.1 (PREDICTED: uncharacterized protein LOC103493818 [Cucumis melo] >XP_016901316.1 PREDICTED: uncharacterized protein LOC103493818 [Cucumis melo])

HSP 1 Score: 387.1 bits (993), Expect = 3.8e-104
Identity = 193/209 (92.34%), Postives = 198/209 (94.74%), Query Frame = 0

Query: 1   MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKG 60
           MALQTYAHSQL  PH  AL S+ SSY+TSEIRLP+ ST SRR +LRLVCSSSDANSSKKG
Sbjct: 1   MALQTYAHSQLLGPHPTALSSIHSSYSTSEIRLPLSSTTSRRPHLRLVCSSSDANSSKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIP 120
           VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDR+P TFIP
Sbjct: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRSPTTFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNG VTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 209

BLAST of Bhi09G002389 vs. NCBI nr
Match: XP_022940851.1 (DNA repair RAD52-like protein 2, chloroplastic [Cucurbita moschata] >XP_022940852.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita moschata] >XP_022940853.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 364.4 bits (934), Expect = 2.6e-97
Identity = 186/209 (89.00%), Postives = 191/209 (91.39%), Query Frame = 0

Query: 1   MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKG 60
           MALQTYAHSQL  P LPA   LPSSY+ SEIRLP ISTA+ RR+L LVCSSSDA S KKG
Sbjct: 1   MALQTYAHSQLLGPRLPAFSFLPSSYSVSEIRLPQISTAT-RRHLHLVCSSSDA-SGKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIP 120
           VPN+NYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIA K PHSD  +R PATFIP
Sbjct: 61  VPNTNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAPKVPHSDPQNRPPATFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNG VTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 207

BLAST of Bhi09G002389 vs. NCBI nr
Match: XP_023522333.1 (DNA repair RAD52-like protein 2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023522340.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023522347.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 2.2e-96
Identity = 185/209 (88.52%), Postives = 190/209 (90.91%), Query Frame = 0

Query: 1   MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKG 60
           MALQTYAHSQL  P LPA   LPSSY+ SEIRLP ISTA+ RR+L LVCSSSDA S KKG
Sbjct: 1   MALQTYAHSQLLGPRLPAFSFLPSSYSVSEIRLPQISTAT-RRHLHLVCSSSDA-SGKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIP 120
           VPN+NYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIA K P SD  +R PATFIP
Sbjct: 61  VPNTNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAPKVPQSDPQNRPPATFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNG VTVVYRVTVRGSDGEAHRESTGTVSATDSNI
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 207

BLAST of Bhi09G002389 vs. NCBI nr
Match: XP_022982164.1 (DNA repair RAD52-like protein 2, chloroplastic [Cucurbita maxima] >XP_022982165.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita maxima] >XP_022982166.1 DNA repair RAD52-like protein 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 357.1 bits (915), Expect = 4.2e-95
Identity = 182/209 (87.08%), Postives = 189/209 (90.43%), Query Frame = 0

Query: 1   MALQTYAHSQLSRPHLPALLSLPSSYTTSEIRLPVISTASRRRYLRLVCSSSDANSSKKG 60
           MALQTYAH QL  P LPA   LPSSY+ SEIRLP ISTA+ RR+L LVCSSS+A S KKG
Sbjct: 1   MALQTYAHFQLLGPRLPAFSFLPSSYSVSEIRLPQISTAT-RRHLHLVCSSSEA-SGKKG 60

Query: 61  VPNSNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAQKAPHSDTHDRAPATFIP 120
           VPN+NYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIA K P SD  +R PATFIP
Sbjct: 61  VPNTNYVVPLNKSFSPANSSCITRPLAEILRDLNKRIPDNIAPKVPQSDPQNRPPATFIP 120

Query: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGGVTVVYRVTVRGSDGEAHRESTGTVSATDSNI 180
           WFHANRMLSFYAPGWCGEIRDVIFSDNG VTVVYRVTVRGSDGEAHRESTGTVSATDSN+
Sbjct: 121 WFHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRVTVRGSDGEAHRESTGTVSATDSNV 180

Query: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 210
           EDPVAAAEEIAFCKACARFGLGLYLYHEE
Sbjct: 181 EDPVAAAEEIAFCKACARFGLGLYLYHEE 207

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
sp|Q9FIJ4|RD522_ARATH6.6e-6063.73DNA repair RAD52-like protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q9FVV7|RD521_ARATH4.2e-3050.00DNA repair RAD52-like protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 G... [more]
Match NameE-valueIdentityDescription
AT5G47870.13.7e-6163.73FUNCTIONS IN: molecular_function unknown[more]
AT1G71310.22.3e-3150.00cobalt ion binding[more]
Match NameE-valueIdentityDescription
tr|A0A0A0L5X0|A0A0A0L5X0_CUCSA5.9e-10693.30Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G663650 PE=4 SV=1[more]
tr|A0A1S4DZ99|A0A1S4DZ99_CUCME2.5e-10492.34uncharacterized protein LOC103493818 OS=Cucumis melo OX=3656 GN=LOC103493818 PE=... [more]
tr|A0A1R3J5C8|A0A1R3J5C8_COCAP2.1e-6669.63Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_07532 PE=4 ... [more]
tr|A0A2I4FC08|A0A2I4FC08_9ROSI1.0e-6565.07uncharacterized protein LOC108997396 OS=Juglans regia OX=51240 GN=LOC108997396 P... [more]
tr|A0A1U8HQ21|A0A1U8HQ21_GOSHI3.9e-6574.14uncharacterized protein LOC107888517 isoform X1 OS=Gossypium hirsutum OX=3635 GN... [more]
Match NameE-valueIdentityDescription
XP_004145544.18.9e-10693.30PREDICTED: uncharacterized protein LOC101203655 [Cucumis sativus] >KGN55506.1 hy... [more]
XP_008452970.13.8e-10492.34PREDICTED: uncharacterized protein LOC103493818 [Cucumis melo] >XP_016901316.1 P... [more]
XP_022940851.12.6e-9789.00DNA repair RAD52-like protein 2, chloroplastic [Cucurbita moschata] >XP_02294085... [more]
XP_023522333.12.2e-9688.52DNA repair RAD52-like protein 2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_... [more]
XP_022982164.14.2e-9587.08DNA repair RAD52-like protein 2, chloroplastic [Cucurbita maxima] >XP_022982165.... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000724double-strand break repair via homologous recombination
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR037489RAD52-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M002389Bhi09M002389mRNA


Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34050:SF3SUBFAMILY NOT NAMEDcoord: 27..209
IPR037489DNA repair RAD52-like proteinPANTHERPTHR34050FAMILY NOT NAMEDcoord: 27..209