Bhi08G001344 (gene) Wax gourd

Overview
NameBhi08G001344
Typegene
OrganismBenincasa hispida (Wax gourd)
Description60S ribosomal protein L27A
Locationchr8 : 46691888 .. 46692637 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATTCGGACTTCCTTGCGCTCGCCGCTCCCTGCAACTCTGAAAACCTAATTCTCTTCCACTCGCCGACGAAATGACGACCCGCTTCAAGAAGAACAGAAAGAAGCGCGGTCACGTGAGCGCCGGCCATGGTCGTATCGGCAAGCACCGTAAGCATCCTGGTGGTCGTGGTAATGCCGGAGGTATGCACCACCACAGAATCCTCTTCGACAAATACCATCCCGGTTACTTCGGTAAAGTTGGTATGAGGTACTTCCATAAGCTCCGTAACAAATTCTATTGTCCCATTGTAAACGTCGACAAGCTCTGGTCCCTCGTCCCTCAGGAAGTTAAGGACAAGGCTACTAAGGATAATGTCCCTTTGATTGATGTAACCCAGTTTGGGTATTTCAAAGTGTTGGGCAAAGGGGTTTTGCCTGAGAACCAGCCTGTCGTTGTGAAAGCCAAGCTCATCTCAAAAATTGCAGAGAAGAAAATCAAAGAGAATGGTGGTGCGGTTGTCCTTACGGCTTAGGTTTATTGGGTAACTTTTAGTTTATGATTTTGTTTCCAAATTAGTTTTGATATTTCTTGTGGTGTTATTCGAAGTATTGGATTAATGTTATCAAACTTTGTGTTTCTGTTTTTACTTTGAACTCAGTCAAGATTTTGAATGTGTTTCTTGAATTATCATCTCTCTTGAATGTTATACATTGTTAATCTCGCTAGTTTTGTGGGCTTTCTATATCGTTATTAAAGTCGCTAAATGTC

mRNA sequence

CTAATTCGGACTTCCTTGCGCTCGCCGCTCCCTGCAACTCTGAAAACCTAATTCTCTTCCACTCGCCGACGAAATGACGACCCGCTTCAAGAAGAACAGAAAGAAGCGCGGTCACGTGAGCGCCGGCCATGGTCGTATCGGCAAGCACCGTAAGCATCCTGGTGGTCGTGGTAATGCCGGAGGTATGCACCACCACAGAATCCTCTTCGACAAATACCATCCCGGTTACTTCGGTAAAGTTGGTATGAGGTACTTCCATAAGCTCCGTAACAAATTCTATTGTCCCATTGTAAACGTCGACAAGCTCTGGTCCCTCGTCCCTCAGGAAGTTAAGGACAAGGCTACTAAGGATAATGTCCCTTTGATTGATGTAACCCAGTTTGGGTATTTCAAAGTGTTGGGCAAAGGGGTTTTGCCTGAGAACCAGCCTGTCGTTGTGAAAGCCAAGCTCATCTCAAAAATTGCAGAGAAGAAAATCAAAGAGAATGGTGGTGCGGTTGTCCTTACGGCTTAGGTTTATTGGGTAACTTTTAGTTTATGATTTTGTTTCCAAATTAGTTTTGATATTTCTTGTGGTGTTATTCGAAGTATTGGATTAATGTTATCAAACTTTGTGTTTCTGTTTTTACTTTGAACTCAGTCAAGATTTTGAATGTGTTTCTTGAATTATCATCTCTCTTGAATGTTATACATTGTTAATCTCGCTAGTTTTGTGGGCTTTCTATATCGTTATTAAAGTCGCTAAATGTC

Coding sequence (CDS)

ATGACGACCCGCTTCAAGAAGAACAGAAAGAAGCGCGGTCACGTGAGCGCCGGCCATGGTCGTATCGGCAAGCACCGTAAGCATCCTGGTGGTCGTGGTAATGCCGGAGGTATGCACCACCACAGAATCCTCTTCGACAAATACCATCCCGGTTACTTCGGTAAAGTTGGTATGAGGTACTTCCATAAGCTCCGTAACAAATTCTATTGTCCCATTGTAAACGTCGACAAGCTCTGGTCCCTCGTCCCTCAGGAAGTTAAGGACAAGGCTACTAAGGATAATGTCCCTTTGATTGATGTAACCCAGTTTGGGTATTTCAAAGTGTTGGGCAAAGGGGTTTTGCCTGAGAACCAGCCTGTCGTTGTGAAAGCCAAGCTCATCTCAAAAATTGCAGAGAAGAAAATCAAAGAGAATGGTGGTGCGGTTGTCCTTACGGCTTAG

Protein sequence

MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPVVVKAKLISKIAEKKIKENGGAVVLTA
Homology
[Close]
BLAST of Bhi08G001344 vs. Swiss-Prot
Match: sp|P49637|R27A3_ARATH (60S ribosomal protein L27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27AC PE=2 SV=2)

HSP 1 Score: 211.1 bits (536), Expect = 8.4e-54
Identity = 126/146 (86.30%), Postives = 133/146 (91.10%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHH      XXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXX RNKF+CPIVN+DKLWSLVP++VK K+TKDNVPLIDVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  XXXLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISK AEKKIKE GGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. Swiss-Prot
Match: sp|Q9LR33|R27A2_ARATH (60S ribosomal protein L27a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27AB PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.3e-51
Identity = 122/146 (83.56%), Postives = 130/146 (89.04%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           M T  KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHH      XXXXXXXXXXXXXX
Sbjct: 1   MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXX RNKF+CPIVN+DKLWSLVP++VK K++KDNVPLIDVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  XXXLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISK AEKKIKE GGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. Swiss-Prot
Match: sp|P48160|RL27A_DICDI (60S ribosomal protein L27a OS=Dictyostelium discoideum OX=44689 GN=rpl27a PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 2.8e-33
Identity = 74/149 (49.66%), Postives = 97/149 (65.10%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           M TRF K+RK RG V AG+GR+GKHRKHPGGRGNAGG+ H                    
Sbjct: 1   MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRH 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDN---VPLIDVTQFGYFKVLGKGVLPEN 120
               RN+++CP V+++K+W+LVP+ V+      N    P++DVTQ G+FKVLG G+LP  
Sbjct: 61  FHLLRNQYHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILP-T 120

Query: 121 QPVVVKAKLISKIAEKKIKENGGAVVLTA 147
           QP++VKA+  SK+AEKKIK  GGA +L A
Sbjct: 121 QPIIVKARYFSKVAEKKIKAVGGACILVA 148

[Close]
BLAST of Bhi08G001344 vs. Swiss-Prot
Match: sp|Q56K03|RL27A_BOVIN (60S ribosomal protein L27a OS=Bos taurus OX=9913 GN=RPL27A PE=2 SV=3)

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-33
Identity = 103/149 (69.13%), Postives = 120/149 (80.54%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMH XXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDN---VPLIDVTQFGYFKVLGKGVLPEN 120
           XXXXRN+ +CP VN+DKLW+LV ++ +  A K+     P+IDV + GY+KVLGKG LP+ 
Sbjct: 61  XXXXRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPK- 120

Query: 121 QPVVVKAKLISKIAEKKIKENGGAVVLTA 147
           QPV+VKAK  S+ AE+KIK  GGA VL A
Sbjct: 121 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148

[Close]
BLAST of Bhi08G001344 vs. Swiss-Prot
Match: sp|P14115|RL27A_MOUSE (60S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5)

HSP 1 Score: 142.5 bits (358), Expect = 3.7e-33
Identity = 103/149 (69.13%), Postives = 120/149 (80.54%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           M +R +K RK RGHVS GHGRIGKHRKHPGGRGNAGGMH XXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDN---VPLIDVTQFGYFKVLGKGVLPEN 120
           XXXXRN+ +CP VN+DKLW+LV ++ +  A K+     P+IDV + GY+KVLGKG LP+ 
Sbjct: 61  XXXXRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGVAPIIDVVRSGYYKVLGKGKLPK- 120

Query: 121 QPVVVKAKLISKIAEKKIKENGGAVVLTA 147
           QPV+VKAK  S+ AE+KIK  GGA VL A
Sbjct: 121 QPVIVKAKFFSRRAEEKIKGVGGACVLVA 148

[Close]
BLAST of Bhi08G001344 vs. TAIR10
Match: AT1G70600.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 211.1 bits (536), Expect = 4.7e-55
Identity = 126/146 (86.30%), Postives = 133/146 (91.10%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHH      XXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXX RNKF+CPIVN+DKLWSLVP++VK K+TKDNVPLIDVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  XXXLRNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISK AEKKIKE GGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. TAIR10
Match: AT1G23290.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 203.0 bits (515), Expect = 1.3e-52
Identity = 122/146 (83.56%), Postives = 130/146 (89.04%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           M T  KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHH      XXXXXXXXXXXXXX
Sbjct: 1   MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXX RNKF+CPIVN+DKLWSLVP++VK K++KDNVPLIDVTQ G+FKVLGKG LPEN+P 
Sbjct: 61  XXXLRNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPF 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISK AEKKIKE GGAVVLTA
Sbjct: 121 VVKAKLISKTAEKKIKEAGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. TAIR10
Match: AT1G12960.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-23
Identity = 72/146 (49.32%), Postives = 77/146 (52.74%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAG-GMHHXXXXXXXXXXXXXXXXXXX 60
           MTT  KK R  R HVS GHGR GKHRK PG RGNAG GM +                   
Sbjct: 1   MTTSRKKTRNLREHVSVGHGRFGKHRKLPGSRGNAGVGMRY------------------- 60

Query: 61  XXXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQP 120
                RNKFYC IVN+DKLWS+                          VLGKG LPEN+P
Sbjct: 61  -FHKLRNKFYCQIVNLDKLWSM--------------------------VLGKGFLPENKP 100

Query: 121 VVVKAKLISKIAEKKIKENGGAVVLT 146
           VVVKAKL+S   EKKIKE G AVVLT
Sbjct: 121 VVVKAKLVSNTDEKKIKEAGSAVVLT 100

[Close]
BLAST of Bhi08G001344 vs. TrEMBL
Match: tr|A0A1S3AXX5|A0A1S3AXX5_CUCME (60S ribosomal protein L27a-3-like OS=Cucumis melo OX=3656 GN=LOC103483791 PE=3 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.9e-58
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDKLWSLVPQEVKDKA+KDNVPLIDVTQFGYFKVLGKGVLPENQPV
Sbjct: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. TrEMBL
Match: tr|A0A0A0LQZ7|A0A0A0LQZ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046840 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 5.5e-58
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDKLWSLVPQEVKDKA+KDNVPLIDVTQFGYFKVLGKGVLPEN+PV
Sbjct: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENKPV 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. TrEMBL
Match: tr|A0A067KGS0|A0A067KGS0_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11415 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-57
Identity = 139/146 (95.21%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVN+DKLWSL+PQEVKDKA+KDN PL+DVTQFGYFKVLGKGVLPENQP+
Sbjct: 61  XXXXRNKFYCPIVNIDKLWSLIPQEVKDKASKDNAPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKL+SKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. TrEMBL
Match: tr|B6VC54|B6VC54_VERFO (60S ribosomal protein L27A OS=Vernicia fordii OX=73154 GN=RPL27A PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-57
Identity = 139/146 (95.21%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVN+DKLWS+VPQEVKDKA+KDNVP++DVTQFGYFKVLGKGVLPENQP+
Sbjct: 61  XXXXRNKFYCPIVNIDKLWSMVPQEVKDKASKDNVPMLDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKL+SKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. TrEMBL
Match: tr|A0A1S3BF89|A0A1S3BF89_CUCME (60S ribosomal protein L27a-3 OS=Cucumis melo OX=3656 GN=LOC103488974 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 7.9e-57
Identity = 139/146 (95.21%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDK+WSL+PQEVKDKA+KDNVPL+DVTQFGYFKVLGKGVLPENQP+
Sbjct: 61  XXXXRNKFYCPIVNVDKIWSLIPQEVKDKASKDNVPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKL+SKIAEKKIKE GGAVVLTA
Sbjct: 121 VVKAKLVSKIAEKKIKEAGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. NCBI nr
Match: XP_008438796.1 (PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis melo])

HSP 1 Score: 234.2 bits (596), Expect = 2.8e-58
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDKLWSLVPQEVKDKA+KDNVPLIDVTQFGYFKVLGKGVLPENQPV
Sbjct: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. NCBI nr
Match: XP_022136990.1 (60S ribosomal protein L27a-3-like [Momordica charantia])

HSP 1 Score: 233.4 bits (594), Expect = 4.9e-58
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDKLWSLVPQEVKDKA+KDNVPLIDVTQFGYFKVLGKGV+PENQPV
Sbjct: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGVMPENQPV 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. NCBI nr
Match: XP_004152490.1 (PREDICTED: 60S ribosomal protein L27a-3 [Cucumis sativus] >KGN64340.1 hypothetical protein Csa_1G046840 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 8.3e-58
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDKLWSLVPQEVKDKA+KDNVPLIDVTQFGYFKVLGKGVLPEN+PV
Sbjct: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGVLPENKPV 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. NCBI nr
Match: XP_022923732.1 (60S ribosomal protein L27a-3-like [Cucurbita moschata] >XP_023001144.1 60S ribosomal protein L27a-3-like [Cucurbita maxima] >XP_023519004.1 60S ribosomal protein L27a-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDKLWSLVPQEVKDKA+KDN PL+DVTQFGYFKVLGKGVLPENQP+
Sbjct: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKASKDNAPLVDVTQFGYFKVLGKGVLPENQPI 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146

[Close]
BLAST of Bhi08G001344 vs. NCBI nr
Match: XP_022994677.1 (60S ribosomal protein L27a-3-like [Cucurbita maxima] >XP_023541109.1 60S ribosomal protein L27a-3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 231.5 bits (589), Expect = 1.8e-57
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60
           MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKATKDNVPLIDVTQFGYFKVLGKGVLPENQPV 120
           XXXXRNKFYCPIVNVDKLWSLVPQEVKDKA+KDNVPLIDVTQFGYFKVLGKG LPENQPV
Sbjct: 61  XXXXRNKFYCPIVNVDKLWSLVPQEVKDKASKDNVPLIDVTQFGYFKVLGKGGLPENQPV 120

Query: 121 VVKAKLISKIAEKKIKENGGAVVLTA 147
           VVKAKLISKIAEKKIKENGGAVVLTA
Sbjct: 121 VVKAKLISKIAEKKIKENGGAVVLTA 146

The following BLAST results are available for this feature:
BLAST of Bhi08G001344 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P49637|R27A3_ARATH8.4e-5486.3060S ribosomal protein L27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL27AC PE=2 SV=... [more]
sp|Q9LR33|R27A2_ARATH2.3e-5183.5660S ribosomal protein L27a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL27AB PE=2 SV=... [more]
sp|P48160|RL27A_DICDI2.8e-3349.6660S ribosomal protein L27a OS=Dictyostelium discoideum OX=44689 GN=rpl27a PE=3 S... [more]
sp|Q56K03|RL27A_BOVIN3.7e-3369.1360S ribosomal protein L27a OS=Bos taurus OX=9913 GN=RPL27A PE=2 SV=3[more]
sp|P14115|RL27A_MOUSE3.7e-3369.1360S ribosomal protein L27a OS=Mus musculus OX=10090 GN=Rpl27a PE=1 SV=5[more]
BLAST of Bhi08G001344 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70600.14.7e-5586.30Ribosomal protein L18e/L15 superfamily protein[more]
AT1G23290.11.3e-5283.56Ribosomal protein L18e/L15 superfamily protein[more]
AT1G12960.11.2e-2349.32Ribosomal protein L18e/L15 superfamily protein[more]
BLAST of Bhi08G001344 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AXX5|A0A1S3AXX5_CUCME1.9e-5899.3260S ribosomal protein L27a-3-like OS=Cucumis melo OX=3656 GN=LOC103483791 PE=3 S... [more]
tr|A0A0A0LQZ7|A0A0A0LQZ7_CUCSA5.5e-5898.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G046840 PE=3 SV=1[more]
tr|A0A067KGS0|A0A067KGS0_JATCU2.1e-5795.21Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_11415 PE=3 SV=1[more]
tr|B6VC54|B6VC54_VERFO2.1e-5795.2160S ribosomal protein L27A OS=Vernicia fordii OX=73154 GN=RPL27A PE=2 SV=1[more]
tr|A0A1S3BF89|A0A1S3BF89_CUCME7.9e-5795.2160S ribosomal protein L27a-3 OS=Cucumis melo OX=3656 GN=LOC103488974 PE=3 SV=1[more]
BLAST of Bhi08G001344 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008438796.12.8e-5899.32PREDICTED: 60S ribosomal protein L27a-3-like [Cucumis melo][more]
XP_022136990.14.9e-5898.6360S ribosomal protein L27a-3-like [Momordica charantia][more]
XP_004152490.18.3e-5898.63PREDICTED: 60S ribosomal protein L27a-3 [Cucumis sativus] >KGN64340.1 hypothetic... [more]
XP_022923732.11.4e-5797.2660S ribosomal protein L27a-3-like [Cucurbita moschata] >XP_023001144.1 60S ribos... [more]
XP_022994677.11.8e-5798.6360S ribosomal protein L27a-3-like [Cucurbita maxima] >XP_023541109.1 60S ribosom... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR036227L18e/L15P_sf
IPR030878Ribosomal_L15
IPR001196Ribosomal_L15_CS
IPR021131Ribosomal_L18e/L15P
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005622 intracellular
cellular_component GO:0030529 intracellular ribonucleoprotein complex
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001344Bhi08M001344mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 28..143
e-value: 2.2E-21
score: 76.7
NoneNo IPR availableGENE3DG3DSA:3.100.10.10coord: 58..146
e-value: 6.5E-39
score: 133.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR11721:SF1060S RIBOSOMAL PROTEIN L27A-1-RELATEDcoord: 1..146
NoneNo IPR availablePANTHERPTHR1172160S RIBOSOMAL PROTEIN L27Acoord: 1..146
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 107..139
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 1..145
score: 11.695
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILYSSF52080Ribosomal proteins L15p and L18ecoord: 6..145

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi08G001344Csa5G598710Cucumber (Chinese Long) v2cuwgoB497
Bhi08G001344Csa1G046840Cucumber (Chinese Long) v2cuwgoB030
Bhi08G001344MELO3C002294Melon (DHL92) v3.5.1mewgoB175
Bhi08G001344MELO3C011956Melon (DHL92) v3.5.1mewgoB069
Bhi08G001344ClCG05G025700Watermelon (Charleston Gray)wcgwgoB465
Bhi08G001344ClCG01G013450Watermelon (Charleston Gray)wcgwgoB231
Bhi08G001344CSPI05G22320Wild cucumber (PI 183967)cpiwgoB501
Bhi08G001344CSPI01G08770Wild cucumber (PI 183967)cpiwgoB030
Bhi08G001344Cucsa.098720Cucumber (Gy14) v1cgywgoB139
Bhi08G001344Cucsa.286430Cucumber (Gy14) v1cgywgoB578
Bhi08G001344CmaCh18G007730Cucurbita maxima (Rimu)cmawgoB0537
Bhi08G001344CmaCh18G001880Cucurbita maxima (Rimu)cmawgoB0521
Bhi08G001344CmaCh13G008630Cucurbita maxima (Rimu)cmawgoB0268
Bhi08G001344CmoCh13G008940Cucurbita moschata (Rifu)cmowgoB0260
Bhi08G001344CmoCh18G001490Cucurbita moschata (Rifu)cmowgoB0517
Bhi08G001344Lsi02G004080Bottle gourd (USVL1VR-Ls)lsiwgoB240
Bhi08G001344Lsi04G005850Bottle gourd (USVL1VR-Ls)lsiwgoB376
Bhi08G001344Cp4.1LG09g09960Cucurbita pepo (Zucchini)cpewgoB0046
Bhi08G001344Cp4.1LG20g02550Cucurbita pepo (Zucchini)cpewgoB0638
Bhi08G001344CsGy5G021790Cucumber (Gy14) v2cgybwgoB473
Bhi08G001344CsGy1G008710Cucumber (Gy14) v2cgybwgoB027
Bhi08G001344MELO3C002294.2Melon (DHL92) v3.6.1medwgoB177
Bhi08G001344MELO3C011956.2Melon (DHL92) v3.6.1medwgoB067
Bhi08G001344Carg07656Silver-seed gourdcarwgoB1180
Bhi08G001344Carg06747Silver-seed gourdcarwgoB0601
Bhi08G001344CsaV3_5G031180Cucumber (Chinese Long) v3cucwgoB509
Bhi08G001344CsaV3_1G008800Cucumber (Chinese Long) v3cucwgoB033
Bhi08G001344Cla010049Watermelon (97103) v1wgowmB494
Bhi08G001344Cla003439Watermelon (97103) v1wgowmB509
Bhi08G001344Cla97C05G107920Watermelon (97103) v2wgowmbB493
Bhi08G001344Cla97C01G012520Watermelon (97103) v2wgowmbB450
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Bhi08G001344Bhi07G001428Wax gourdwgowgoB118
The following block(s) are covering this gene:
GeneOrganismBlock
Bhi08G001344Cucumber (Gy14) v1cgywgoB410
Bhi08G001344Cucumber (Gy14) v2cgybwgoB054
Bhi08G001344Cucurbita maxima (Rimu)cmawgoB0063
Bhi08G001344Cucurbita maxima (Rimu)cmawgoB0139
Bhi08G001344Cucurbita moschata (Rifu)cmowgoB0058
Bhi08G001344Cucurbita moschata (Rifu)cmowgoB0132
Bhi08G001344Cucurbita pepo (Zucchini)cpewgoB0446
Bhi08G001344Cucurbita pepo (Zucchini)cpewgoB0868
Bhi08G001344Wild cucumber (PI 183967)cpiwgoB058
Bhi08G001344Cucumber (Chinese Long) v3cucwgoB060
Bhi08G001344Cucumber (Chinese Long) v2cuwgoB059
Bhi08G001344Bottle gourd (USVL1VR-Ls)lsiwgoB489
Bhi08G001344Melon (DHL92) v3.6.1medwgoB280
Bhi08G001344Melon (DHL92) v3.5.1mewgoB280
Bhi08G001344Watermelon (Charleston Gray)wcgwgoB528
Bhi08G001344Watermelon (Charleston Gray)wcgwgoB644
Bhi08G001344Watermelon (97103) v2wgowmbB504
Bhi08G001344Watermelon (97103) v2wgowmbB497
Bhi08G001344Silver-seed gourdcarwgoB0743