Bhi08G001276 (gene) Wax gourd

Overview
NameBhi08G001276
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPentatricopeptide repeat-containing protein, mitochondrial
Locationchr8 : 44900642 .. 44901091 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAAAGAGTGTTTCTTATGATCGATTCACATATAGCATTCAACTAAGTGCATATGCTGCTGCATCTGATATTATGGGAATCGATAAGATTGTCGAACAAATAGAATCAGATACCAATGTTGTTCTAGATTGGAACTGTTATGTCATTGCTGTGAATGCTTACCTTAAAGTTGGTTTAATAGACAAGTCCATTTCCATGCTGAGGAAATCAGAAGGTCTAGCAACTGCCAAAAGGAGAAGTTATGCATTTGATGTCCTCAAACTATATGCTAAAAGTGGAAAGAAAGATGAGTTATACCGTGTATGGAATCTCTACAAGAGGGAAAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTACACGATATCGAAGCTGCTGAGCTTATTTTCAAGGAGTGGGAAACCCATAAACTGTCTTACGACTTTTGA

mRNA sequence

ATGAAGGAAAAGAGTGTTTCTTATGATCGATTCACATATAGCATTCAACTAAGTGCATATGCTGCTGCATCTGATATTATGGGAATCGATAAGATTGTCGAACAAATAGAATCAGATACCAATGTTGTTCTAGATTGGAACTGTTATGTCATTGCTGTGAATGCTTACCTTAAAGTTGGTTTAATAGACAAGTCCATTTCCATGCTGAGGAAATCAGAAGGTCTAGCAACTGCCAAAAGGAGAAGTTATGCATTTGATGTCCTCAAACTATATGCTAAAAGTGGAAAGAAAGATGAGTTATACCGTGTATGGAATCTCTACAAGAGGGAAAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTACACGATATCGAAGCTGCTGAGCTTATTTTCAAGGAGTGGGAAACCCATAAACTGTCTTACGACTTTTGA

Coding sequence (CDS)

ATGAAGGAAAAGAGTGTTTCTTATGATCGATTCACATATAGCATTCAACTAAGTGCATATGCTGCTGCATCTGATATTATGGGAATCGATAAGATTGTCGAACAAATAGAATCAGATACCAATGTTGTTCTAGATTGGAACTGTTATGTCATTGCTGTGAATGCTTACCTTAAAGTTGGTTTAATAGACAAGTCCATTTCCATGCTGAGGAAATCAGAAGGTCTAGCAACTGCCAAAAGGAGAAGTTATGCATTTGATGTCCTCAAACTATATGCTAAAAGTGGAAAGAAAGATGAGTTATACCGTGTATGGAATCTCTACAAGAGGGAAAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTACACGATATCGAAGCTGCTGAGCTTATTTTCAAGGAGTGGGAAACCCATAAACTGTCTTACGACTTTTGA

Protein sequence

MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVGLIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKREKVYNKGFISMIRSLLILHDIEAAELIFKEWETHKLSYDF
Homology
[Close]
BLAST of Bhi08G001276 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.6e-29
Identity = 63/150 (42.00%), Postives = 99/150 (66.00%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M++++V  D FT + +L AY+  SD+ G++K + + E+D  + LDW  Y    N Y+K G
Sbjct: 200 MEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG 259

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVL-KLYAKSGKKDELYRVWNLYKR-EKVYNKGFI 120
           L +K++ MLRKSE +  A++R +A++VL   Y  +GKK+E+YR+W+LYK  +  YN G+I
Sbjct: 260 LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYI 319

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           S+I +LL + DIE  E I +EWE     +D
Sbjct: 320 SVISALLKMDDIEEVEKIMEEWEAGHSLFD 349

[Close]
BLAST of Bhi08G001276 vs. Swiss-Prot
Match: sp|Q9C7F1|PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 53/151 (35.10%), Postives = 86/151 (56.95%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK+  V  D  T +  L  Y+A  D+  ++K + + E    + L+W+  +    AYL+  
Sbjct: 199 MKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRAR 258

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFD-VLKLYAKSGKKDELYRVWNLYKRE--KVYNKGF 120
              K++ MLR +E L   K    A+D ++KLY ++G ++E+ RVW LYK +  +  N G+
Sbjct: 259 SSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGY 318

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            ++IRSLL + DI  AE I+K WE+  L +D
Sbjct: 319 RTVIRSLLKVDDIVGAEEIYKVWESLPLEFD 349

[Close]
BLAST of Bhi08G001276 vs. Swiss-Prot
Match: sp|Q93WC5|PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 45/150 (30.00%), Postives = 82/150 (54.67%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKEKS++    TYS+ + +  +  D+ G++K++++++++   +  WN +      Y+KVG
Sbjct: 201 MKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVG 260

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKRE--KVYNKGFI 120
           L  K+   L+  E       R     ++ LY       E+YRVW+L K+    V N  ++
Sbjct: 261 LYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYL 320

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           +M+R+L  L DI+  + +F EWE+   +YD
Sbjct: 321 TMLRALSKLDDIDGVKKVFAEWESTCWTYD 350

[Close]
BLAST of Bhi08G001276 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.5e-16
Identity = 45/151 (29.80%), Postives = 87/151 (57.62%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKE++V+ D ++Y I ++A+ A  D+  I   +  +E   ++ +DWN Y +A   Y+  G
Sbjct: 187 MKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGG 246

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKR--EKVYNKGFI 120
             D+++ +L+ SE     K       ++ LYA+ GKK E+ R+W+L K   ++  N+ ++
Sbjct: 247 DCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYL 306

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ++++SL+ +  +  AE +  EW++    YDF
Sbjct: 307 TVLQSLVKIDALVEAEEVLTEWKSSGNCYDF 337

[Close]
BLAST of Bhi08G001276 vs. Swiss-Prot
Match: sp|Q9FZ24|PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15
Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK++ +S    TYSI + +  + +D+ G++KI++++  D+     WN +      Y K G
Sbjct: 233 MKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAG 292

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYK--REKVYNKGFI 120
           L +K+ S L+  E       R     ++ LYA   K  E+YRVW   K  R +V N  ++
Sbjct: 293 LYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYL 352

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            M++++  L D++  + IF EWE+   +YD
Sbjct: 353 VMLQAMSKLGDLDGIKKIFTEWESKCWAYD 382

[Close]
BLAST of Bhi08G001276 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 5.3e-30
Identity = 63/150 (42.00%), Postives = 99/150 (66.00%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M++++V  D FT + +L AY+  SD+ G++K + + E+D  + LDW  Y    N Y+K G
Sbjct: 200 MEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG 259

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVL-KLYAKSGKKDELYRVWNLYKR-EKVYNKGFI 120
           L +K++ MLRKSE +  A++R +A++VL   Y  +GKK+E+YR+W+LYK  +  YN G+I
Sbjct: 260 LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYI 319

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           S+I +LL + DIE  E I +EWE     +D
Sbjct: 320 SVISALLKMDDIEEVEKIMEEWEAGHSLFD 349

[Close]
BLAST of Bhi08G001276 vs. TAIR10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-19
Identity = 53/151 (35.10%), Postives = 86/151 (56.95%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK+  V  D  T +  L  Y+A  D+  ++K + + E    + L+W+  +    AYL+  
Sbjct: 199 MKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRAR 258

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFD-VLKLYAKSGKKDELYRVWNLYKRE--KVYNKGF 120
              K++ MLR +E L   K    A+D ++KLY ++G ++E+ RVW LYK +  +  N G+
Sbjct: 259 SSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGY 318

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            ++IRSLL + DI  AE I+K WE+  L +D
Sbjct: 319 RTVIRSLLKVDDIVGAEEIYKVWESLPLEFD 349

[Close]
BLAST of Bhi08G001276 vs. TAIR10
Match: AT4G01990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 8.0e-18
Identity = 45/150 (30.00%), Postives = 82/150 (54.67%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKEKS++    TYS+ + +  +  D+ G++K++++++++   +  WN +      Y+KVG
Sbjct: 201 MKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVG 260

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKRE--KVYNKGFI 120
           L  K+   L+  E       R     ++ LY       E+YRVW+L K+    V N  ++
Sbjct: 261 LYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYL 320

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           +M+R+L  L DI+  + +F EWE+   +YD
Sbjct: 321 TMLRALSKLDDIDGVKKVFAEWESTCWTYD 350

[Close]
BLAST of Bhi08G001276 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.0e-17
Identity = 45/151 (29.80%), Postives = 87/151 (57.62%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKE++V+ D ++Y I ++A+ A  D+  I   +  +E   ++ +DWN Y +A   Y+  G
Sbjct: 187 MKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGG 246

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKR--EKVYNKGFI 120
             D+++ +L+ SE     K       ++ LYA+ GKK E+ R+W+L K   ++  N+ ++
Sbjct: 247 DCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYL 306

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ++++SL+ +  +  AE +  EW++    YDF
Sbjct: 307 TVLQSLVKIDALVEAEEVLTEWKSSGNCYDF 337

[Close]
BLAST of Bhi08G001276 vs. TAIR10
Match: AT1G02370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-16
Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK++ +S    TYSI + +  + +D+ G++KI++++  D+     WN +      Y K G
Sbjct: 233 MKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAG 292

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYK--REKVYNKGFI 120
           L +K+ S L+  E       R     ++ LYA   K  E+YRVW   K  R +V N  ++
Sbjct: 293 LYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYL 352

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            M++++  L D++  + IF EWE+   +YD
Sbjct: 353 VMLQAMSKLGDLDGIKKIFTEWESKCWAYD 382

[Close]
BLAST of Bhi08G001276 vs. TrEMBL
Match: tr|A0A2I4GWM6|A0A2I4GWM6_9ROSI (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109011514 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 193 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 252

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 253 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 312

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 313 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 344

[Close]
BLAST of Bhi08G001276 vs. TrEMBL
Match: tr|A0A2I4GWN9|A0A2I4GWN9_9ROSI (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X3 OS=Juglans regia OX=51240 GN=LOC109011514 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 105 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 164

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 165 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 224

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 225 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 256

[Close]
BLAST of Bhi08G001276 vs. TrEMBL
Match: tr|A0A2I4GWP0|A0A2I4GWP0_9ROSI (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109011514 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 180 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 239

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 240 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 299

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 300 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 331

[Close]
BLAST of Bhi08G001276 vs. TrEMBL
Match: tr|A0A1S3B572|A0A1S3B572_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486303 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.4e-39
Identity = 84/113 (74.34%), Postives = 102/113 (90.27%), Query Frame = 0 

Query: 38  SDTNVVLDWNCYVIAVNAYLKVGLIDKSISMLRKSEG-LATAKRRSYAFDV-LKLYAKSG 97
           S+T++VLDWNCYVIA NAY KVGLIDKS+SML+KSEG LAT K++ +AF+V LKLYA++G
Sbjct: 228 SNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNG 287

Query: 98  KKDELYRVWNLYKREKVYNKGFISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           KKDE++R+WNLYK+EK++NKGFISMIRSLLIL DI  AE I+KEWET KLSYD
Sbjct: 288 KKDEVHRIWNLYKKEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYD 340

[Close]
BLAST of Bhi08G001276 vs. TrEMBL
Match: tr|A0A2R6QLF3|A0A2R6QLF3_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17334 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38
Identity = 88/152 (57.89%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK   YDR+T++I+LSAYAA+SD  GID IV ++ESD  ++ D + Y IA +AYL+VG
Sbjct: 193 MEEKG-CYDRYTFTIRLSAYAASSDSKGIDNIVARMESDPRIIPDCSSYAIAADAYLQVG 252

Query: 61  LIDKSISMLRKSEG-LATAKRRSYAFD-VLKLYAKSGKKDELYRVWNLYK-REKVYNKGF 120
            ++K++ ML+K EG + T KRRS AF  +LKLYAK+G+K ELYR+W LYK +EK+YNKG+
Sbjct: 253 SLEKALEMLKKLEGHIQTTKRRSVAFHFLLKLYAKAGEKGELYRIWGLYKEKEKIYNKGY 312

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           I+M+ SLL L DIE  E IF+EWE+  LSYDF
Sbjct: 313 IAMMSSLLTLDDIEGTEKIFEEWESRGLSYDF 343

[Close]
BLAST of Bhi08G001276 vs. NCBI nr
Match: XP_011653151.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 2.5e-49
Identity = 100/150 (66.67%), Postives = 127/150 (84.67%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           +KE  V +D+FTY+ +LSAYA A D  GI+KI+EQ+E +T++VLDWNCYVIA NAY KVG
Sbjct: 188 LKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQMEXNTSIVLDWNCYVIAANAYNKVG 247

Query: 61  LIDKSISMLRKSEG-LATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKREKVYNKGFI 120
           LIDKSISML+KSEG LA  K++ +AF+V LKLYA++GKKDE++ +WNLYK+EK++NKGFI
Sbjct: 248 LIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHLIWNLYKKEKIFNKGFI 307

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           SMI SL +L DI+ AE I+KEWET KLSYD
Sbjct: 308 SMITSLFVLDDIKGAERIYKEWETQKLSYD 337

[Close]
BLAST of Bhi08G001276 vs. NCBI nr
Match: XP_018848306.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X1 [Juglans regia])

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 193 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 252

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 253 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 312

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 313 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 344

[Close]
BLAST of Bhi08G001276 vs. NCBI nr
Match: XP_018848307.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X2 [Juglans regia])

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 180 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 239

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 240 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 299

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 300 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 331

[Close]
BLAST of Bhi08G001276 vs. NCBI nr
Match: XP_018848308.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X3 [Juglans regia])

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0 

Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 105 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 164

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 165 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 224

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 225 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 256

[Close]
BLAST of Bhi08G001276 vs. NCBI nr
Match: XP_008442434.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 84/113 (74.34%), Postives = 102/113 (90.27%), Query Frame = 0 

Query: 38  SDTNVVLDWNCYVIAVNAYLKVGLIDKSISMLRKSEG-LATAKRRSYAFDV-LKLYAKSG 97
           S+T++VLDWNCYVIA NAY KVGLIDKS+SML+KSEG LAT K++ +AF+V LKLYA++G
Sbjct: 228 SNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNG 287

Query: 98  KKDELYRVWNLYKREKVYNKGFISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           KKDE++R+WNLYK+EK++NKGFISMIRSLLIL DI  AE I+KEWET KLSYD
Sbjct: 288 KKDEVHRIWNLYKKEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYD 340

The following BLAST results are available for this feature:
BLAST of Bhi08G001276 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SKU6|PP166_ARATH9.6e-2942.00Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
sp|Q9C7F1|PPR61_ARATH1.3e-1735.10Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th... [more]
sp|Q93WC5|PP300_ARATH1.4e-1630.00Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidop... [more]
sp|Q84JR3|PP334_ARATH5.5e-1629.80Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
sp|Q9FZ24|PPR4_ARATH2.7e-1530.67Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidop... [more]
BLAST of Bhi08G001276 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20710.15.3e-3042.00Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G28020.17.2e-1935.10Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G01990.18.0e-1830.00Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G21705.13.0e-1729.80Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G02370.11.5e-1630.67Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Bhi08G001276 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2I4GWM6|A0A2I4GWM6_9ROSI4.0e-4060.53pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isofor... [more]
tr|A0A2I4GWN9|A0A2I4GWN9_9ROSI4.0e-4060.53pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isofor... [more]
tr|A0A2I4GWP0|A0A2I4GWP0_9ROSI4.0e-4060.53pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isofor... [more]
tr|A0A1S3B572|A0A1S3B572_CUCME3.4e-3974.34pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc... [more]
tr|A0A2R6QLF3|A0A2R6QLF3_ACTCH3.8e-3857.89Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi... [more]
BLAST of Bhi08G001276 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011653151.12.5e-4966.67PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g... [more]
XP_018848306.16.1e-4060.53PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
XP_018848307.16.1e-4060.53PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
XP_018848308.16.1e-4060.53PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
XP_008442434.15.1e-3974.34PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009058 biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi08M001276Bhi08M001276mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 1..148
e-value: 3.8E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR24015:SF1625SUBFAMILY NOT NAMEDcoord: 5..149
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 5..149

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi08G001276CsaV3_1G012250Cucumber (Chinese Long) v3cucwgoB041
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Bhi08G001276Bhi05G001613Wax gourdwgowgoB075
The following block(s) are covering this gene:
GeneOrganismBlock
Bhi08G001276Cucumber (Gy14) v1cgywgoB233
Bhi08G001276Cucumber (Gy14) v1cgywgoB578
Bhi08G001276Cucumber (Gy14) v2cgybwgoB035
Bhi08G001276Cucurbita maxima (Rimu)cmawgoB0273
Bhi08G001276Cucurbita maxima (Rimu)cmawgoB0523
Bhi08G001276Cucurbita moschata (Rifu)cmowgoB0265
Bhi08G001276Cucurbita moschata (Rifu)cmowgoB0522
Bhi08G001276Cucurbita pepo (Zucchini)cpewgoB0049
Bhi08G001276Cucurbita pepo (Zucchini)cpewgoB0640
Bhi08G001276Wild cucumber (PI 183967)cpiwgoB038
Bhi08G001276Cucumber (Chinese Long) v2cuwgoB038
Bhi08G001276Bottle gourd (USVL1VR-Ls)lsiwgoB247
Bhi08G001276Melon (DHL92) v3.6.1medwgoB183
Bhi08G001276Melon (DHL92) v3.5.1mewgoB181
Bhi08G001276Watermelon (Charleston Gray)wcgwgoB347
Bhi08G001276Watermelon (97103) v2wgowmbB477
Bhi08G001276Watermelon (97103) v1wgowmB478
Bhi08G001276Silver-seed gourdcarwgoB0194
Bhi08G001276Silver-seed gourdcarwgoB1100