Bhi08M001276 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi08M001276
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein, mitochondrial
Location	chr8 : 44900642 .. 44901091 (+)
Sequence length	450

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAAAGAGTGTTTCTTATGATCGATTCACATATAGCATTCAACTAAGTGCATATGCTGCTGCATCTGATATTATGGGAATCGATAAGATTGTCGAACAAATAGAATCAGATACCAATGTTGTTCTAGATTGGAACTGTTATGTCATTGCTGTGAATGCTTACCTTAAAGTTGGTTTAATAGACAAGTCCATTTCCATGCTGAGGAAATCAGAAGGTCTAGCAACTGCCAAAAGGAGAAGTTATGCATTTGATGTCCTCAAACTATATGCTAAAAGTGGAAAGAAAGATGAGTTATACCGTGTATGGAATCTCTACAAGAGGGAAAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTACACGATATCGAAGCTGCTGAGCTTATTTTCAAGGAGTGGGAAACCCATAAACTGTCTTACGACTTTTGA

mRNA sequence

ATGAAGGAAAAGAGTGTTTCTTATGATCGATTCACATATAGCATTCAACTAAGTGCATATGCTGCTGCATCTGATATTATGGGAATCGATAAGATTGTCGAACAAATAGAATCAGATACCAATGTTGTTCTAGATTGGAACTGTTATGTCATTGCTGTGAATGCTTACCTTAAAGTTGGTTTAATAGACAAGTCCATTTCCATGCTGAGGAAATCAGAAGGTCTAGCAACTGCCAAAAGGAGAAGTTATGCATTTGATGTCCTCAAACTATATGCTAAAAGTGGAAAGAAAGATGAGTTATACCGTGTATGGAATCTCTACAAGAGGGAAAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTACACGATATCGAAGCTGCTGAGCTTATTTTCAAGGAGTGGGAAACCCATAAACTGTCTTACGACTTTTGA

Coding sequence (CDS)

ATGAAGGAAAAGAGTGTTTCTTATGATCGATTCACATATAGCATTCAACTAAGTGCATATGCTGCTGCATCTGATATTATGGGAATCGATAAGATTGTCGAACAAATAGAATCAGATACCAATGTTGTTCTAGATTGGAACTGTTATGTCATTGCTGTGAATGCTTACCTTAAAGTTGGTTTAATAGACAAGTCCATTTCCATGCTGAGGAAATCAGAAGGTCTAGCAACTGCCAAAAGGAGAAGTTATGCATTTGATGTCCTCAAACTATATGCTAAAAGTGGAAAGAAAGATGAGTTATACCGTGTATGGAATCTCTACAAGAGGGAAAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTACACGATATCGAAGCTGCTGAGCTTATTTTCAAGGAGTGGGAAACCCATAAACTGTCTTACGACTTTTGA

Protein sequence

MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVGLIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKREKVYNKGFISMIRSLLILHDIEAAELIFKEWETHKLSYDF

Homology

[Close]

BLAST of Bhi08M001276 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.6e-29
Identity = 63/150 (42.00%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M++++V  D FT + +L AY+  SD+ G++K + + E+D  + LDW  Y    N Y+K G
Sbjct: 200 MEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG 259

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVL-KLYAKSGKKDELYRVWNLYKR-EKVYNKGFI 120
           L +K++ MLRKSE +  A++R +A++VL   Y  +GKK+E+YR+W+LYK  +  YN G+I
Sbjct: 260 LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYI 319

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           S+I +LL + DIE  E I +EWE     +D
Sbjct: 320 SVISALLKMDDIEEVEKIMEEWEAGHSLFD 349

[Close]

BLAST of Bhi08M001276 vs. Swiss-Prot
Match: sp|Q9C7F1|PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17
Identity = 53/151 (35.10%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK+  V  D  T +  L  Y+A  D+  ++K + + E    + L+W+  +    AYL+  
Sbjct: 199 MKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRAR 258

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFD-VLKLYAKSGKKDELYRVWNLYKRE--KVYNKGF 120
              K++ MLR +E L   K    A+D ++KLY ++G ++E+ RVW LYK +  +  N G+
Sbjct: 259 SSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGY 318

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            ++IRSLL + DI  AE I+K WE+  L +D
Sbjct: 319 RTVIRSLLKVDDIVGAEEIYKVWESLPLEFD 349

[Close]

BLAST of Bhi08M001276 vs. Swiss-Prot
Match: sp|Q93WC5|PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 45/150 (30.00%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKEKS++    TYS+ + +  +  D+ G++K++++++++   +  WN +      Y+KVG
Sbjct: 201 MKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVG 260

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKRE--KVYNKGFI 120
           L  K+   L+  E       R     ++ LY       E+YRVW+L K+    V N  ++
Sbjct: 261 LYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYL 320

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           +M+R+L  L DI+  + +F EWE+   +YD
Sbjct: 321 TMLRALSKLDDIDGVKKVFAEWESTCWTYD 350

[Close]

BLAST of Bhi08M001276 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.5e-16
Identity = 45/151 (29.80%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKE++V+ D ++Y I ++A+ A  D+  I   +  +E   ++ +DWN Y +A   Y+  G
Sbjct: 187 MKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGG 246

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKR--EKVYNKGFI 120
             D+++ +L+ SE     K       ++ LYA+ GKK E+ R+W+L K   ++  N+ ++
Sbjct: 247 DCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYL 306

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ++++SL+ +  +  AE +  EW++    YDF
Sbjct: 307 TVLQSLVKIDALVEAEEVLTEWKSSGNCYDF 337

[Close]

BLAST of Bhi08M001276 vs. Swiss-Prot
Match: sp|Q9FZ24|PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15
Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK++ +S    TYSI + +  + +D+ G++KI++++  D+     WN +      Y K G
Sbjct: 233 MKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAG 292

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYK--REKVYNKGFI 120
           L +K+ S L+  E       R     ++ LYA   K  E+YRVW   K  R +V N  ++
Sbjct: 293 LYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYL 352

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            M++++  L D++  + IF EWE+   +YD
Sbjct: 353 VMLQAMSKLGDLDGIKKIFTEWESKCWAYD 382

[Close]

BLAST of Bhi08M001276 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 5.3e-30
Identity = 63/150 (42.00%), Postives = 99/150 (66.00%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M++++V  D FT + +L AY+  SD+ G++K + + E+D  + LDW  Y    N Y+K G
Sbjct: 200 MEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAG 259

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVL-KLYAKSGKKDELYRVWNLYKR-EKVYNKGFI 120
           L +K++ MLRKSE +  A++R +A++VL   Y  +GKK+E+YR+W+LYK  +  YN G+I
Sbjct: 260 LTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYI 319

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           S+I +LL + DIE  E I +EWE     +D
Sbjct: 320 SVISALLKMDDIEEVEKIMEEWEAGHSLFD 349

[Close]

BLAST of Bhi08M001276 vs. TAIR10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-19
Identity = 53/151 (35.10%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK+  V  D  T +  L  Y+A  D+  ++K + + E    + L+W+  +    AYL+  
Sbjct: 199 MKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRAR 258

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFD-VLKLYAKSGKKDELYRVWNLYKRE--KVYNKGF 120
              K++ MLR +E L   K    A+D ++KLY ++G ++E+ RVW LYK +  +  N G+
Sbjct: 259 SSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGY 318

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            ++IRSLL + DI  AE I+K WE+  L +D
Sbjct: 319 RTVIRSLLKVDDIVGAEEIYKVWESLPLEFD 349

[Close]

BLAST of Bhi08M001276 vs. TAIR10
Match: AT4G01990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 8.0e-18
Identity = 45/150 (30.00%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKEKS++    TYS+ + +  +  D+ G++K++++++++   +  WN +      Y+KVG
Sbjct: 201 MKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVG 260

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKRE--KVYNKGFI 120
           L  K+   L+  E       R     ++ LY       E+YRVW+L K+    V N  ++
Sbjct: 261 LYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYL 320

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           +M+R+L  L DI+  + +F EWE+   +YD
Sbjct: 321 TMLRALSKLDDIDGVKKVFAEWESTCWTYD 350

[Close]

BLAST of Bhi08M001276 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.0e-17
Identity = 45/151 (29.80%), Postives = 87/151 (57.62%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MKE++V+ D ++Y I ++A+ A  D+  I   +  +E   ++ +DWN Y +A   Y+  G
Sbjct: 187 MKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGG 246

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYKR--EKVYNKGFI 120
             D+++ +L+ SE     K       ++ LYA+ GKK E+ R+W+L K   ++  N+ ++
Sbjct: 247 DCDRAVELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYL 306

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ++++SL+ +  +  AE +  EW++    YDF
Sbjct: 307 TVLQSLVKIDALVEAEEVLTEWKSSGNCYDF 337

[Close]

BLAST of Bhi08M001276 vs. TAIR10
Match: AT1G02370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.5e-16
Identity = 46/150 (30.67%), Postives = 80/150 (53.33%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           MK++ +S    TYSI + +  + +D+ G++KI++++  D+     WN +      Y K G
Sbjct: 233 MKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAG 292

Query: 61  LIDKSISMLRKSEGLATAKRRSYAFDVLKLYAKSGKKDELYRVWNLYK--REKVYNKGFI 120
           L +K+ S L+  E       R     ++ LYA   K  E+YRVW   K  R +V N  ++
Sbjct: 293 LYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYL 352

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
            M++++  L D++  + IF EWE+   +YD
Sbjct: 353 VMLQAMSKLGDLDGIKKIFTEWESKCWAYD 382

[Close]

BLAST of Bhi08M001276 vs. TrEMBL
Match: tr|A0A2I4GWM6|A0A2I4GWM6_9ROSI (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109011514 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 193 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 252

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 253 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 312

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 313 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 344

[Close]

BLAST of Bhi08M001276 vs. TrEMBL
Match: tr|A0A2I4GWN9|A0A2I4GWN9_9ROSI (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X3 OS=Juglans regia OX=51240 GN=LOC109011514 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 105 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 164

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 165 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 224

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 225 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 256

[Close]

BLAST of Bhi08M001276 vs. TrEMBL
Match: tr|A0A2I4GWP0|A0A2I4GWP0_9ROSI (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109011514 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 180 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 239

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 240 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 299

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 300 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 331

[Close]

BLAST of Bhi08M001276 vs. TrEMBL
Match: tr|A0A1S3B572|A0A1S3B572_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486303 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.4e-39
Identity = 84/113 (74.34%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 38  SDTNVVLDWNCYVIAVNAYLKVGLIDKSISMLRKSEG-LATAKRRSYAFDV-LKLYAKSG 97
           S+T++VLDWNCYVIA NAY KVGLIDKS+SML+KSEG LAT K++ +AF+V LKLYA++G
Sbjct: 228 SNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNG 287

Query: 98  KKDELYRVWNLYKREKVYNKGFISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           KKDE++R+WNLYK+EK++NKGFISMIRSLLIL DI  AE I+KEWET KLSYD
Sbjct: 288 KKDEVHRIWNLYKKEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYD 340

[Close]

BLAST of Bhi08M001276 vs. TrEMBL
Match: tr|A0A2R6QLF3|A0A2R6QLF3_ACTCH (Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc17334 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.8e-38
Identity = 88/152 (57.89%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK   YDR+T++I+LSAYAA+SD  GID IV ++ESD  ++ D + Y IA +AYL+VG
Sbjct: 193 MEEKG-CYDRYTFTIRLSAYAASSDSKGIDNIVARMESDPRIIPDCSSYAIAADAYLQVG 252

Query: 61  LIDKSISMLRKSEG-LATAKRRSYAFD-VLKLYAKSGKKDELYRVWNLYK-REKVYNKGF 120
            ++K++ ML+K EG + T KRRS AF  +LKLYAK+G+K ELYR+W LYK +EK+YNKG+
Sbjct: 253 SLEKALEMLKKLEGHIQTTKRRSVAFHFLLKLYAKAGEKGELYRIWGLYKEKEKIYNKGY 312

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           I+M+ SLL L DIE  E IF+EWE+  LSYDF
Sbjct: 313 IAMMSSLLTLDDIEGTEKIFEEWESRGLSYDF 343

[Close]

BLAST of Bhi08M001276 vs. NCBI nr
Match: XP_011653151.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 2.5e-49
Identity = 100/150 (66.67%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           +KE  V +D+FTY+ +LSAYA A D  GI+KI+EQ+E +T++VLDWNCYVIA NAY KVG
Sbjct: 188 LKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQMEXNTSIVLDWNCYVIAANAYNKVG 247

Query: 61  LIDKSISMLRKSEG-LATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKREKVYNKGFI 120
           LIDKSISML+KSEG LA  K++ +AF+V LKLYA++GKKDE++ +WNLYK+EK++NKGFI
Sbjct: 248 LIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHLIWNLYKKEKIFNKGFI 307

Query: 121 SMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           SMI SL +L DI+ AE I+KEWET KLSYD
Sbjct: 308 SMITSLFVLDDIKGAERIYKEWETQKLSYD 337

[Close]

BLAST of Bhi08M001276 vs. NCBI nr
Match: XP_018848306.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X1 [Juglans regia])

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 193 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 252

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 253 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 312

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 313 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 344

[Close]

BLAST of Bhi08M001276 vs. NCBI nr
Match: XP_018848307.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X2 [Juglans regia])

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 180 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 239

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 240 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 299

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 300 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 331

[Close]

BLAST of Bhi08M001276 vs. NCBI nr
Match: XP_018848308.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isoform X3 [Juglans regia])

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-40
Identity = 92/152 (60.53%), Postives = 118/152 (77.63%), Query Frame = 0


Query: 1   MKEKSVSYDRFTYSIQLSAYAAASDIMGIDKIVEQIESDTNVVLDWNCYVIAVNAYLKVG 60
           M+EK ++ D++T SI+LSAYAA SD+  I+K VE++ESD ++VLDW  Y IA + YLKVG
Sbjct: 105 MEEKGINPDKYTLSIRLSAYAAISDVEEINKTVERMESDPHIVLDWKPYSIAASGYLKVG 164

Query: 61  LIDKSISMLRKSEGL-ATAKRRSYAFDV-LKLYAKSGKKDELYRVWNLYKRE-KVYNKGF 120
           L+DK++ M++K EGL   +K  S AFDV LKLYAK GKKDELYR+W LYK + K+YNKG+
Sbjct: 165 LLDKALEMVKKLEGLIENSKWSSIAFDVLLKLYAKMGKKDELYRIWELYKEKGKIYNKGY 224

Query: 121 ISMIRSLLILHDIEAAELIFKEWETHKLSYDF 150
           ISMI SLL   DIE AE IF+EWE+ KL+ DF
Sbjct: 225 ISMIGSLLAFDDIEGAEKIFEEWESMKLTCDF 256

[Close]

BLAST of Bhi08M001276 vs. NCBI nr
Match: XP_008442434.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 5.1e-39
Identity = 84/113 (74.34%), Postives = 102/113 (90.27%), Query Frame = 0


Query: 38  SDTNVVLDWNCYVIAVNAYLKVGLIDKSISMLRKSEG-LATAKRRSYAFDV-LKLYAKSG 97
           S+T++VLDWNCYVIA NAY KVGLIDKS+SML+KSEG LAT K++ +AF+V LKLYA++G
Sbjct: 228 SNTSIVLDWNCYVIAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNG 287

Query: 98  KKDELYRVWNLYKREKVYNKGFISMIRSLLILHDIEAAELIFKEWETHKLSYD 149
           KKDE++R+WNLYK+EK++NKGFISMIRSLLIL DI  AE I+KEWET KLSYD
Sbjct: 288 KKDEVHRIWNLYKKEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYD 340

The following BLAST results are available for this feature:

BLAST of Bhi08M001276 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKU6\|PP166_ARATH	9.6e-29	42.00	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
sp\|Q9C7F1\|PPR61_ARATH	1.3e-17	35.10	Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th...	[more]
sp\|Q93WC5\|PP300_ARATH	1.4e-16	30.00	Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidop...	[more]
sp\|Q84JR3\|PP334_ARATH	5.5e-16	29.80	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
sp\|Q9FZ24\|PPR4_ARATH	2.7e-15	30.67	Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidop...	[more]

BLAST of Bhi08M001276 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20710.1	5.3e-30	42.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28020.1	7.2e-19	35.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G01990.1	8.0e-18	30.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	3.0e-17	29.80	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02370.1	1.5e-16	30.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi08M001276 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2I4GWM6\|A0A2I4GWM6_9ROSI	4.0e-40	60.53	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isofor...	[more]
tr\|A0A2I4GWN9\|A0A2I4GWN9_9ROSI	4.0e-40	60.53	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isofor...	[more]
tr\|A0A2I4GWP0\|A0A2I4GWP0_9ROSI	4.0e-40	60.53	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like isofor...	[more]
tr\|A0A1S3B572\|A0A1S3B572_CUCME	3.4e-39	74.34	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
tr\|A0A2R6QLF3\|A0A2R6QLF3_ACTCH	3.8e-38	57.89	Pentatricopeptide repeat-containing protein OS=Actinidia chinensis var. chinensi...	[more]

BLAST of Bhi08M001276 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653151.1	2.5e-49	66.67	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g...	[more]
XP_018848306.1	6.1e-40	60.53	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_018848307.1	6.1e-40	60.53	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_018848308.1	6.1e-40	60.53	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_008442434.1	5.1e-39	74.34	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi08G001276	Bhi08G001276	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi08M001276.exon1	Bhi08M001276.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi08M001276	cds.Bhi08M001276	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi08M001276	Bhi08M001276-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..148 e-value: 3.8E-10 score: 41.6
None	No IPR available	PANTHER	PTHR24015:SF1625	SUBFAMILY NOT NAMED	coord: 5..149
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 5..149