Bhi05G001613 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05G001613
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein
Location	chr5 : 58787953 .. 58788426 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAAGTAGGATTTATGAAAACGTCTCTTCCCTATAATTTTATGTTAAGGCTTTATGCTCATCTCGCTAAACATGAGAAACTTGATGAATTAATGGACGAAATGGAAGAAATGGGAATTGATTATGATATTTTTACATATAATATTCGTATGACTGCTTATGCAGCTACTTCCAATATAACAAACATGGAAAAGCTTTTGTTGAAAATGGAGGCAGATCCACTAGTTACTATGGATTGGCGTGCTTATTTCAATGTAGCAAATGGATATTTCAAAGCTGGTCTTTCTGAAAATAGTATATTGATGCTGAAGAGAGCAGAACAACTCATTGGTGACAACCAAAAGTGGTTTGCATATAAATGTCTCATTACACAATATGCTGCTATGGGAAATAAGGATGAAAATAAGGATGAGGTGTATCGGGTTTGGAACTTGTACAGGAATTTGAAAAGAAGATACAATTCAGGATAA

mRNA sequence

ATGAGGGAAGTAGGATTTATGAAAACGTCTCTTCCCTATAATTTTATGTTAAGGCTTTATGCTCATCTCGCTAAACATGAGAAACTTGATGAATTAATGGACGAAATGGAAGAAATGGGAATTGATTATGATATTTTTACATATAATATTCGTATGACTGCTTATGCAGCTACTTCCAATATAACAAACATGGAAAAGCTTTTGTTGAAAATGGAGGCAGATCCACTAGTTACTATGGATTGGCGTGCTTATTTCAATGTAGCAAATGGATATTTCAAAGCTGGTCTTTCTGAAAATAGTATATTGATGCTGAAGAGAGCAGAACAACTCATTGGTGACAACCAAAAGTGGTTTGCATATAAATGTCTCATTACACAATATGCTGCTATGGGAAATAAGGATGAAAATAAGGATGAGGTGTATCGGGTTTGGAACTTGTACAGGAATTTGAAAAGAAGATACAATTCAGGATAA

Coding sequence (CDS)

ATGAGGGAAGTAGGATTTATGAAAACGTCTCTTCCCTATAATTTTATGTTAAGGCTTTATGCTCATCTCGCTAAACATGAGAAACTTGATGAATTAATGGACGAAATGGAAGAAATGGGAATTGATTATGATATTTTTACATATAATATTCGTATGACTGCTTATGCAGCTACTTCCAATATAACAAACATGGAAAAGCTTTTGTTGAAAATGGAGGCAGATCCACTAGTTACTATGGATTGGCGTGCTTATTTCAATGTAGCAAATGGATATTTCAAAGCTGGTCTTTCTGAAAATAGTATATTGATGCTGAAGAGAGCAGAACAACTCATTGGTGACAACCAAAAGTGGTTTGCATATAAATGTCTCATTACACAATATGCTGCTATGGGAAATAAGGATGAAAATAAGGATGAGGTGTATCGGGTTTGGAACTTGTACAGGAATTTGAAAAGAAGATACAATTCAGGATAA

Protein sequence

MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG

Homology

[Close]

BLAST of Bhi05G001613 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-34
Identity = 69/157 (43.95%), Postives = 106/157 (67.52%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+K  LPYN ML LY    K+  +++L+ EME+  +  DIFT N R+ AY+  S+
Sbjct: 165 MKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSD 224

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  MEK L++ EAD  + +DWR Y + ANGY KAGL+E ++ ML+++EQ++   ++  AY
Sbjct: 225 VEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAY 284

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           + L++ Y A G     K+EVYR+W+LY+ L   YN+G
Sbjct: 285 EVLMSFYGAAG----KKEEVYRLWSLYKELDGFYNTG 317

[Close]

BLAST of Bhi05G001613 vs. Swiss-Prot
Match: sp|Q9C7F1|PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G +   +PYN M+ LY+ L   EK++EL+ EM++  ++ D  T N  +  Y+A  +
Sbjct: 164 MRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +T MEK L K E    + ++W    ++A  Y +A  S  ++ ML+  EQL+       AY
Sbjct: 224 VTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRN-LKRRYNSG 158
             L+  Y   G    N++EV RVW LY++ +  R N+G
Sbjct: 284 DHLMKLYGEAG----NREEVLRVWKLYKSKIGERDNNG 317

[Close]

BLAST of Bhi05G001613 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 52/156 (33.33%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+ +SL YN ++ LY ++ +HEK+ ++++EM+E  +  D ++Y I + A+ A  +
Sbjct: 152 MKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYD 211

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  +   L  ME    +TMDW  Y   A  Y   G  + ++ +LK +E  + + +    Y
Sbjct: 212 LERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRL-EKKDGEGY 271

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNL-KRRYN 156
             LIT YA +G     K EV R+W+L +++ KRR N
Sbjct: 272 NHLITLYARLG----KKIEVLRLWDLEKDVCKRRIN 302

[Close]

BLAST of Bhi05G001613 vs. Swiss-Prot
Match: sp|Q3E911|PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14
Identity = 44/147 (29.93%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 4   VGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITN 63
           +GF+ T  P+N M++LY    ++EK+  ++  M+   I  ++ +YN+ M A    S +  
Sbjct: 172 LGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAA 231

Query: 64  MEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCL 123
           +E +  +M  D  V + W +   +AN Y K+G  E + L+L+ AE+++  + +   Y  L
Sbjct: 232 VETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNR-LGYFFL 291

Query: 124 ITQYAAMGNKDENKDEVYRVWNLYRNL 151
           IT YA++G    NK+ V R+W + +++
Sbjct: 292 ITLYASLG----NKEGVVRLWEVSKSV 313

[Close]

BLAST of Bhi05G001613 vs. Swiss-Prot
Match: sp|Q94B59|PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.5e-11
Identity = 38/147 (25.85%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 10  SLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITNMEKLLL 69
           ++ YN M+ LY  + + EK+ E+++ +++  +  DIFTYN+ +++ AAT NI  + K+L 
Sbjct: 192 AITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILE 251

Query: 70  KMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCLITQYAA 129
           +M  D      W  Y ++ + Y  +    N+   L    +     ++W  Y  L+  +  
Sbjct: 252 EMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTG 311

Query: 130 MGNKDENKDEVYRVWNLYRNLKRRYNS 157
           +G    NK  + ++W   RN  +  +S
Sbjct: 312 LG----NKVMIDQIWKSLRNTNQILSS 334

[Close]

BLAST of Bhi05G001613 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 69/157 (43.95%), Postives = 106/157 (67.52%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+K  LPYN ML LY    K+  +++L+ EME+  +  DIFT N R+ AY+  S+
Sbjct: 165 MKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSD 224

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  MEK L++ EAD  + +DWR Y + ANGY KAGL+E ++ ML+++EQ++   ++  AY
Sbjct: 225 VEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAY 284

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           + L++ Y A G     K+EVYR+W+LY+ L   YN+G
Sbjct: 285 EVLMSFYGAAG----KKEEVYRLWSLYKELDGFYNTG 317

[Close]

BLAST of Bhi05G001613 vs. TAIR10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 8.1e-21
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G +   +PYN M+ LY+ L   EK++EL+ EM++  ++ D  T N  +  Y+A  +
Sbjct: 164 MRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +T MEK L K E    + ++W    ++A  Y +A  S  ++ ML+  EQL+       AY
Sbjct: 224 VTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRN-LKRRYNSG 158
             L+  Y   G    N++EV RVW LY++ +  R N+G
Sbjct: 284 DHLMKLYGEAG----NREEVLRVWKLYKSKIGERDNNG 317

[Close]

BLAST of Bhi05G001613 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 9.9e-19
Identity = 52/156 (33.33%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+ +SL YN ++ LY ++ +HEK+ ++++EM+E  +  D ++Y I + A+ A  +
Sbjct: 152 MKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYD 211

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  +   L  ME    +TMDW  Y   A  Y   G  + ++ +LK +E  + + +    Y
Sbjct: 212 LERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRL-EKKDGEGY 271

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNL-KRRYN 156
             LIT YA +G     K EV R+W+L +++ KRR N
Sbjct: 272 NHLITLYARLG----KKIEVLRLWDLEKDVCKRRIN 302

[Close]

BLAST of Bhi05G001613 vs. TAIR10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 44/147 (29.93%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 4   VGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITN 63
           +GF+ T  P+N M++LY    ++EK+  ++  M+   I  ++ +YN+ M A    S +  
Sbjct: 172 LGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAA 231

Query: 64  MEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCL 123
           +E +  +M  D  V + W +   +AN Y K+G  E + L+L+ AE+++  + +   Y  L
Sbjct: 232 VETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNR-LGYFFL 291

Query: 124 ITQYAAMGNKDENKDEVYRVWNLYRNL 151
           IT YA++G    NK+ V R+W + +++
Sbjct: 292 ITLYASLG----NKEGVVRLWEVSKSV 313

[Close]

BLAST of Bhi05G001613 vs. TAIR10
Match: AT1G28000.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 7.3e-14
Identity = 42/137 (30.66%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYD-IFTYNIRMTAYAATS 60
           MR    +    PY  M+ LYA L +   +DE++ +M+E G+++D   T N  + AYA+  
Sbjct: 161 MRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLP 220

Query: 61  NITNMEKLLLKMEA-DPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWF 120
           ++  ME  L+ +E  +P  ++ W+   ++A  Y K G S  ++ ML+R E ++    K  
Sbjct: 221 DVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDS 280

Query: 121 AYKCLITQYAAMGNKDE 136
           A K L+  Y   G K +
Sbjct: 281 ANKVLMMMYWDAGAKQD 297

[Close]

BLAST of Bhi05G001613 vs. TrEMBL
Match: tr|A0A251PZS9|A0A251PZS9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 70  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 129

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 130 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 189

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 190 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 222

[Close]

BLAST of Bhi05G001613 vs. TrEMBL
Match: tr|M5VH82|M5VH82_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 164 MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 224 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 284 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 316

[Close]

BLAST of Bhi05G001613 vs. TrEMBL
Match: tr|A0A251PZT4|A0A251PZT4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 78  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 137

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 138 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 197

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 198 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 230

[Close]

BLAST of Bhi05G001613 vs. TrEMBL
Match: tr|A0A2J6MIH9|A0A2J6MIH9_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_4X65741 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-37
Identity = 85/160 (53.12%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G+ K SL YN M+ LY+ + ++EKLD LMDEME+ GI  D FTY IR+ AYA TS 
Sbjct: 170 MRDLGYSK-SLTYNVMMGLYSTMLQYEKLDLLMDEMEQKGIPIDKFTYAIRLNAYAKTSE 229

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSEN---SILMLKRAEQLIGDNQKW 120
           I  MEKLLLKMEADP + M+W AY  VANGY K G  EN   ++++LK++E LI  +QK 
Sbjct: 230 IPKMEKLLLKMEADPEIQMEWHAYTTVANGYLKTGDQENIEKAVVLLKKSEYLIRPSQKK 289

Query: 121 FAYKCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
            AY+ L+T YA+ G     K +VYRVW +Y+N+ + YN G
Sbjct: 290 IAYEILLTLYASAG----RKSDVYRVWKVYKNMGKFYNHG 324

[Close]

BLAST of Bhi05G001613 vs. TrEMBL
Match: tr|A0A251TLN7|A0A251TLN7_HELAN (Putative tetratricopeptide repeat (TPR)-like superfamily protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0301231 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.4e-35
Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G+ K SL YN M+ LY+   K++KLD L++EM++ GI  D FTY IR+ AYA  S 
Sbjct: 150 MRDLGYTK-SLAYNVMMGLYSATNKYQKLDLLIEEMDQKGIQIDKFTYCIRLNAYAKASE 209

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  ME LLL+MEADP V M+W AY  VANGY KAG ++ ++  LK++E LI  +Q+  AY
Sbjct: 210 IQKMEMLLLRMEADPEVRMEWHAYTTVANGYLKAGDTKKALTCLKKSEYLIKPSQRKSAY 269

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           + L+T YA+       KD+VYRVWNLY+NL R YN G
Sbjct: 270 ENLLTLYASA----SRKDDVYRVWNLYKNLGRLYNHG 301

[Close]

BLAST of Bhi05G001613 vs. NCBI nr
Match: XP_007198902.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Prunus persica] >ONI17080.1 hypothetical protein PRUPE_3G136900 [Prunus persica])

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 164 MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 224 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 284 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 316

[Close]

BLAST of Bhi05G001613 vs. NCBI nr
Match: ONI17081.1 (hypothetical protein PRUPE_3G136900 [Prunus persica])

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 78  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 137

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 138 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 197

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 198 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 230

[Close]

BLAST of Bhi05G001613 vs. NCBI nr
Match: ONI17082.1 (hypothetical protein PRUPE_3G136900 [Prunus persica] >ONI17083.1 hypothetical protein PRUPE_3G136900 [Prunus persica] >ONI17084.1 hypothetical protein PRUPE_3G136900 [Prunus persica])

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 70  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 129

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 130 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 189

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 190 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 222

[Close]

BLAST of Bhi05G001613 vs. NCBI nr
Match: PQQ07503.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora])

HSP 1 Score: 166.8 bits (421), Expect = 6.0e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD  T  I++  YA TS+
Sbjct: 161 MKELGYVKGPLPYNVMLTLYSQLGEHEKLDILVKEMEEKVIDYDSSTLKIQLNLYANTSD 220

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I +MEKLL+K+EADPLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 221 IDSMEKLLMKIEADPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRRLAY 280

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 281 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 313

[Close]

BLAST of Bhi05G001613 vs. NCBI nr
Match: PQM33579.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora])

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 82/157 (52.23%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD  T  I++  YA TS+
Sbjct: 161 MKELGYVKGPLPYNVMLTLYSQLGEHEKLDILVKEMEEKVIDYDSSTLKIQLNLYANTSD 220

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EADPLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 221 IDRMEKLLMKIEADPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRRLAY 280

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 281 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 313

The following BLAST results are available for this feature:

BLAST of Bhi05G001613 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKU6\|PP166_ARATH	2.7e-34	43.95	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
sp\|Q9C7F1\|PPR61_ARATH	1.5e-19	34.18	Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th...	[more]
sp\|Q84JR3\|PP334_ARATH	1.8e-17	33.33	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
sp\|Q3E911\|PP400_ARATH	1.8e-14	29.93	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]
sp\|Q94B59\|PP372_ARATH	9.5e-11	25.85	Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop...	[more]

BLAST of Bhi05G001613 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20710.1	1.5e-35	43.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28020.1	8.1e-21	34.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	9.9e-19	33.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	1.0e-15	29.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28000.1	7.3e-14	30.66	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Bhi05G001613 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A251PZS9\|A0A251PZS9_PRUPE	1.8e-38	52.23	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1	[more]
tr\|M5VH82\|M5VH82_PRUPE	1.8e-38	52.23	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1	[more]
tr\|A0A251PZT4\|A0A251PZT4_PRUPE	1.8e-38	52.23	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1	[more]
tr\|A0A2J6MIH9\|A0A2J6MIH9_LACSA	7.5e-37	53.13	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_4X65741 PE=4 SV=1	[more]
tr\|A0A251TLN7\|A0A251TLN7_HELAN	5.4e-35	52.23	Putative tetratricopeptide repeat (TPR)-like superfamily protein OS=Helianthus a...	[more]

BLAST of Bhi05G001613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_007198902.1	2.7e-38	52.23	pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Prunus per...	[more]
ONI17081.1	2.7e-38	52.23	hypothetical protein PRUPE_3G136900 [Prunus persica]	[more]
ONI17082.1	2.7e-38	52.23	hypothetical protein PRUPE_3G136900 [Prunus persica] >ONI17083.1 hypothetical pr...	[more]
PQQ07503.1	6.0e-38	52.23	pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora]	[more]
PQM33579.1	7.8e-38	52.23	pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001613	Bhi05M001613	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 46..72 e-value: 0.49 score: 10.7 coord: 13..41 e-value: 0.0062 score: 16.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 13..44 e-value: 0.0011 score: 16.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..156 e-value: 8.5E-14 score: 53.6
None	No IPR available	PANTHER	PTHR24015:SF644	SUBFAMILY NOT NAMED	coord: 1..154
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..154

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Bhi05G001613	Bhi08G001276	Wax gourd	wgowgoB075

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi05G001613	Wax gourd	wgowgoB071
Bhi05G001613	Cucumber (Gy14) v1	cgywgoB207
Bhi05G001613	Cucumber (Gy14) v1	cgywgoB288
Bhi05G001613	Cucumber (Gy14) v2	cgybwgoB541
Bhi05G001613	Cucumber (Gy14) v2	cgybwgoB633
Bhi05G001613	Cucurbita maxima (Rimu)	cmawgoB0117
Bhi05G001613	Cucurbita maxima (Rimu)	cmawgoB0643
Bhi05G001613	Cucurbita maxima (Rimu)	cmawgoB0679
Bhi05G001613	Cucurbita maxima (Rimu)	cmawgoB0740
Bhi05G001613	Cucurbita moschata (Rifu)	cmowgoB0109
Bhi05G001613	Cucurbita moschata (Rifu)	cmowgoB0234
Bhi05G001613	Cucurbita moschata (Rifu)	cmowgoB0643
Bhi05G001613	Cucurbita moschata (Rifu)	cmowgoB0730
Bhi05G001613	Cucurbita pepo (Zucchini)	cpewgoB0318
Bhi05G001613	Cucurbita pepo (Zucchini)	cpewgoB0844
Bhi05G001613	Cucurbita pepo (Zucchini)	cpewgoB0933
Bhi05G001613	Wild cucumber (PI 183967)	cpiwgoB574
Bhi05G001613	Wild cucumber (PI 183967)	cpiwgoB673
Bhi05G001613	Cucumber (Chinese Long) v3	cucwgoB587
Bhi05G001613	Cucumber (Chinese Long) v3	cucwgoB687
Bhi05G001613	Cucumber (Chinese Long) v2	cuwgoB570
Bhi05G001613	Cucumber (Chinese Long) v2	cuwgoB662
Bhi05G001613	Bottle gourd (USVL1VR-Ls)	lsiwgoB063
Bhi05G001613	Bottle gourd (USVL1VR-Ls)	lsiwgoB116
Bhi05G001613	Melon (DHL92) v3.6.1	medwgoB111
Bhi05G001613	Melon (DHL92) v3.6.1	medwgoB221
Bhi05G001613	Melon (DHL92) v3.5.1	mewgoB110
Bhi05G001613	Melon (DHL92) v3.5.1	mewgoB221
Bhi05G001613	Watermelon (Charleston Gray)	wcgwgoB270
Bhi05G001613	Watermelon (Charleston Gray)	wcgwgoB586
Bhi05G001613	Watermelon (97103) v2	wgowmbB245
Bhi05G001613	Watermelon (97103) v2	wgowmbB262
Bhi05G001613	Watermelon (97103) v1	wgowmB268
Bhi05G001613	Watermelon (97103) v1	wgowmB277
Bhi05G001613	Silver-seed gourd	carwgoB0847
Bhi05G001613	Silver-seed gourd	carwgoB1021