Bhi05M001613 (mRNA) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi05M001613
Type	mRNA
Organism	Benincasa hispida (Wax gourd)
Description	Pentatricopeptide repeat-containing protein
Location	chr5 : 58787953 .. 58788426 (+)
Sequence length	474

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGAAGTAGGATTTATGAAAACGTCTCTTCCCTATAATTTTATGTTAAGGCTTTATGCTCATCTCGCTAAACATGAGAAACTTGATGAATTAATGGACGAAATGGAAGAAATGGGAATTGATTATGATATTTTTACATATAATATTCGTATGACTGCTTATGCAGCTACTTCCAATATAACAAACATGGAAAAGCTTTTGTTGAAAATGGAGGCAGATCCACTAGTTACTATGGATTGGCGTGCTTATTTCAATGTAGCAAATGGATATTTCAAAGCTGGTCTTTCTGAAAATAGTATATTGATGCTGAAGAGAGCAGAACAACTCATTGGTGACAACCAAAAGTGGTTTGCATATAAATGTCTCATTACACAATATGCTGCTATGGGAAATAAGGATGAAAATAAGGATGAGGTGTATCGGGTTTGGAACTTGTACAGGAATTTGAAAAGAAGATACAATTCAGGATAA

mRNA sequence

ATGAGGGAAGTAGGATTTATGAAAACGTCTCTTCCCTATAATTTTATGTTAAGGCTTTATGCTCATCTCGCTAAACATGAGAAACTTGATGAATTAATGGACGAAATGGAAGAAATGGGAATTGATTATGATATTTTTACATATAATATTCGTATGACTGCTTATGCAGCTACTTCCAATATAACAAACATGGAAAAGCTTTTGTTGAAAATGGAGGCAGATCCACTAGTTACTATGGATTGGCGTGCTTATTTCAATGTAGCAAATGGATATTTCAAAGCTGGTCTTTCTGAAAATAGTATATTGATGCTGAAGAGAGCAGAACAACTCATTGGTGACAACCAAAAGTGGTTTGCATATAAATGTCTCATTACACAATATGCTGCTATGGGAAATAAGGATGAAAATAAGGATGAGGTGTATCGGGTTTGGAACTTGTACAGGAATTTGAAAAGAAGATACAATTCAGGATAA

Coding sequence (CDS)

ATGAGGGAAGTAGGATTTATGAAAACGTCTCTTCCCTATAATTTTATGTTAAGGCTTTATGCTCATCTCGCTAAACATGAGAAACTTGATGAATTAATGGACGAAATGGAAGAAATGGGAATTGATTATGATATTTTTACATATAATATTCGTATGACTGCTTATGCAGCTACTTCCAATATAACAAACATGGAAAAGCTTTTGTTGAAAATGGAGGCAGATCCACTAGTTACTATGGATTGGCGTGCTTATTTCAATGTAGCAAATGGATATTTCAAAGCTGGTCTTTCTGAAAATAGTATATTGATGCTGAAGAGAGCAGAACAACTCATTGGTGACAACCAAAAGTGGTTTGCATATAAATGTCTCATTACACAATATGCTGCTATGGGAAATAAGGATGAAAATAAGGATGAGGTGTATCGGGTTTGGAACTTGTACAGGAATTTGAAAAGAAGATACAATTCAGGATAA

Protein sequence

MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG

Homology

[Close]

BLAST of Bhi05M001613 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.7e-34
Identity = 69/157 (43.95%), Postives = 106/157 (67.52%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+K  LPYN ML LY    K+  +++L+ EME+  +  DIFT N R+ AY+  S+
Sbjct: 165 MKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSD 224

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  MEK L++ EAD  + +DWR Y + ANGY KAGL+E ++ ML+++EQ++   ++  AY
Sbjct: 225 VEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAY 284

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           + L++ Y A G     K+EVYR+W+LY+ L   YN+G
Sbjct: 285 EVLMSFYGAAG----KKEEVYRLWSLYKELDGFYNTG 317

[Close]

BLAST of Bhi05M001613 vs. Swiss-Prot
Match: sp|Q9C7F1|PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-19
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G +   +PYN M+ LY+ L   EK++EL+ EM++  ++ D  T N  +  Y+A  +
Sbjct: 164 MRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +T MEK L K E    + ++W    ++A  Y +A  S  ++ ML+  EQL+       AY
Sbjct: 224 VTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRN-LKRRYNSG 158
             L+  Y   G    N++EV RVW LY++ +  R N+G
Sbjct: 284 DHLMKLYGEAG----NREEVLRVWKLYKSKIGERDNNG 317

[Close]

BLAST of Bhi05M001613 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 52/156 (33.33%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+ +SL YN ++ LY ++ +HEK+ ++++EM+E  +  D ++Y I + A+ A  +
Sbjct: 152 MKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYD 211

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  +   L  ME    +TMDW  Y   A  Y   G  + ++ +LK +E  + + +    Y
Sbjct: 212 LERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRL-EKKDGEGY 271

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNL-KRRYN 156
             LIT YA +G     K EV R+W+L +++ KRR N
Sbjct: 272 NHLITLYARLG----KKIEVLRLWDLEKDVCKRRIN 302

[Close]

BLAST of Bhi05M001613 vs. Swiss-Prot
Match: sp|Q3E911|PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14
Identity = 44/147 (29.93%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 4   VGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITN 63
           +GF+ T  P+N M++LY    ++EK+  ++  M+   I  ++ +YN+ M A    S +  
Sbjct: 172 LGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAA 231

Query: 64  MEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCL 123
           +E +  +M  D  V + W +   +AN Y K+G  E + L+L+ AE+++  + +   Y  L
Sbjct: 232 VETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNR-LGYFFL 291

Query: 124 ITQYAAMGNKDENKDEVYRVWNLYRNL 151
           IT YA++G    NK+ V R+W + +++
Sbjct: 292 ITLYASLG----NKEGVVRLWEVSKSV 313

[Close]

BLAST of Bhi05M001613 vs. Swiss-Prot
Match: sp|Q94B59|PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.5e-11
Identity = 38/147 (25.85%), Postives = 74/147 (50.34%), Query Frame = 0


Query: 10  SLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITNMEKLLL 69
           ++ YN M+ LY  + + EK+ E+++ +++  +  DIFTYN+ +++ AAT NI  + K+L 
Sbjct: 192 AITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILE 251

Query: 70  KMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCLITQYAA 129
           +M  D      W  Y ++ + Y  +    N+   L    +     ++W  Y  L+  +  
Sbjct: 252 EMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTG 311

Query: 130 MGNKDENKDEVYRVWNLYRNLKRRYNS 157
           +G    NK  + ++W   RN  +  +S
Sbjct: 312 LG----NKVMIDQIWKSLRNTNQILSS 334

[Close]

BLAST of Bhi05M001613 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35
Identity = 69/157 (43.95%), Postives = 106/157 (67.52%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+K  LPYN ML LY    K+  +++L+ EME+  +  DIFT N R+ AY+  S+
Sbjct: 165 MKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSD 224

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  MEK L++ EAD  + +DWR Y + ANGY KAGL+E ++ ML+++EQ++   ++  AY
Sbjct: 225 VEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAY 284

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           + L++ Y A G     K+EVYR+W+LY+ L   YN+G
Sbjct: 285 EVLMSFYGAAG----KKEEVYRLWSLYKELDGFYNTG 317

[Close]

BLAST of Bhi05M001613 vs. TAIR10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 97.4 bits (241), Expect = 8.1e-21
Identity = 54/158 (34.18%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G +   +PYN M+ LY+ L   EK++EL+ EM++  ++ D  T N  +  Y+A  +
Sbjct: 164 MRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +T MEK L K E    + ++W    ++A  Y +A  S  ++ ML+  EQL+       AY
Sbjct: 224 VTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRN-LKRRYNSG 158
             L+  Y   G    N++EV RVW LY++ +  R N+G
Sbjct: 284 DHLMKLYGEAG----NREEVLRVWKLYKSKIGERDNNG 317

[Close]

BLAST of Bhi05M001613 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 90.5 bits (223), Expect = 9.9e-19
Identity = 52/156 (33.33%), Postives = 90/156 (57.69%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+GF+ +SL YN ++ LY ++ +HEK+ ++++EM+E  +  D ++Y I + A+ A  +
Sbjct: 152 MKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYD 211

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           +  +   L  ME    +TMDW  Y   A  Y   G  + ++ +LK +E  + + +    Y
Sbjct: 212 LERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRL-EKKDGEGY 271

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNL-KRRYN 156
             LIT YA +G     K EV R+W+L +++ KRR N
Sbjct: 272 NHLITLYARLG----KKIEVLRLWDLEKDVCKRRIN 302

[Close]

BLAST of Bhi05M001613 vs. TAIR10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 44/147 (29.93%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 4   VGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSNITN 63
           +GF+ T  P+N M++LY    ++EK+  ++  M+   I  ++ +YN+ M A    S +  
Sbjct: 172 LGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAA 231

Query: 64  MEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAYKCL 123
           +E +  +M  D  V + W +   +AN Y K+G  E + L+L+ AE+++  + +   Y  L
Sbjct: 232 VETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLNRSNR-LGYFFL 291

Query: 124 ITQYAAMGNKDENKDEVYRVWNLYRNL 151
           IT YA++G    NK+ V R+W + +++
Sbjct: 292 ITLYASLG----NKEGVVRLWEVSKSV 313

[Close]

BLAST of Bhi05M001613 vs. TAIR10
Match: AT1G28000.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 7.3e-14
Identity = 42/137 (30.66%), Postives = 72/137 (52.55%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYD-IFTYNIRMTAYAATS 60
           MR    +    PY  M+ LYA L +   +DE++ +M+E G+++D   T N  + AYA+  
Sbjct: 161 MRVQNMLLKPYPYYSMIYLYALLGEKNMIDEILRQMKENGVEHDKNLTANNVLKAYASLP 220

Query: 61  NITNMEKLLLKMEA-DPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWF 120
           ++  ME  L+ +E  +P  ++ W+   ++A  Y K G S  ++ ML+R E ++    K  
Sbjct: 221 DVEAMEMFLMGLEVEEPRFSLAWQTGISIAKAYLKGGSSRKAVEMLRRTELVVDTKSKDS 280

Query: 121 AYKCLITQYAAMGNKDE 136
           A K L+  Y   G K +
Sbjct: 281 ANKVLMMMYWDAGAKQD 297

[Close]

BLAST of Bhi05M001613 vs. TrEMBL
Match: tr|A0A251PZS9|A0A251PZS9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 70  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 129

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 130 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 189

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 190 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 222

[Close]

BLAST of Bhi05M001613 vs. TrEMBL
Match: tr|M5VH82|M5VH82_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 164 MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 224 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 284 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 316

[Close]

BLAST of Bhi05M001613 vs. TrEMBL
Match: tr|A0A251PZT4|A0A251PZT4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.8e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 78  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 137

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 138 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 197

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 198 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 230

[Close]

BLAST of Bhi05M001613 vs. TrEMBL
Match: tr|A0A2J6MIH9|A0A2J6MIH9_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_4X65741 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.5e-37
Identity = 85/160 (53.12%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G+ K SL YN M+ LY+ + ++EKLD LMDEME+ GI  D FTY IR+ AYA TS 
Sbjct: 170 MRDLGYSK-SLTYNVMMGLYSTMLQYEKLDLLMDEMEQKGIPIDKFTYAIRLNAYAKTSE 229

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSEN---SILMLKRAEQLIGDNQKW 120
           I  MEKLLLKMEADP + M+W AY  VANGY K G  EN   ++++LK++E LI  +QK 
Sbjct: 230 IPKMEKLLLKMEADPEIQMEWHAYTTVANGYLKTGDQENIEKAVVLLKKSEYLIRPSQKK 289

Query: 121 FAYKCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
            AY+ L+T YA+ G     K +VYRVW +Y+N+ + YN G
Sbjct: 290 IAYEILLTLYASAG----RKSDVYRVWKVYKNMGKFYNHG 324

[Close]

BLAST of Bhi05M001613 vs. TrEMBL
Match: tr|A0A251TLN7|A0A251TLN7_HELAN (Putative tetratricopeptide repeat (TPR)-like superfamily protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0301231 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.4e-35
Identity = 82/157 (52.23%), Postives = 109/157 (69.43%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           MR++G+ K SL YN M+ LY+   K++KLD L++EM++ GI  D FTY IR+ AYA  S 
Sbjct: 150 MRDLGYTK-SLAYNVMMGLYSATNKYQKLDLLIEEMDQKGIQIDKFTYCIRLNAYAKASE 209

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  ME LLL+MEADP V M+W AY  VANGY KAG ++ ++  LK++E LI  +Q+  AY
Sbjct: 210 IQKMEMLLLRMEADPEVRMEWHAYTTVANGYLKAGDTKKALTCLKKSEYLIKPSQRKSAY 269

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           + L+T YA+       KD+VYRVWNLY+NL R YN G
Sbjct: 270 ENLLTLYASA----SRKDDVYRVWNLYKNLGRLYNHG 301

[Close]

BLAST of Bhi05M001613 vs. NCBI nr
Match: XP_007198902.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Prunus persica] >ONI17080.1 hypothetical protein PRUPE_3G136900 [Prunus persica])

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 164 MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 223

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 224 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 283

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 284 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 316

[Close]

BLAST of Bhi05M001613 vs. NCBI nr
Match: ONI17081.1 (hypothetical protein PRUPE_3G136900 [Prunus persica])

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 78  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 137

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 138 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 197

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 198 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 230

[Close]

BLAST of Bhi05M001613 vs. NCBI nr
Match: ONI17082.1 (hypothetical protein PRUPE_3G136900 [Prunus persica] >ONI17083.1 hypothetical protein PRUPE_3G136900 [Prunus persica] >ONI17084.1 hypothetical protein PRUPE_3G136900 [Prunus persica])

HSP 1 Score: 167.9 bits (424), Expect = 2.7e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD FT  I++  YA TS+
Sbjct: 70  MKELGYVKGPLPYNVMLTLYSQLGQHEKLDILVKEMEEKVIDYDSFTLKIQLNLYANTSD 129

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EA+PLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 130 IDRMEKLLMKIEANPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRTLAY 189

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 190 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 222

[Close]

BLAST of Bhi05M001613 vs. NCBI nr
Match: PQQ07503.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora])

HSP 1 Score: 166.8 bits (421), Expect = 6.0e-38
Identity = 82/157 (52.23%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD  T  I++  YA TS+
Sbjct: 161 MKELGYVKGPLPYNVMLTLYSQLGEHEKLDILVKEMEEKVIDYDSSTLKIQLNLYANTSD 220

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I +MEKLL+K+EADPLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 221 IDSMEKLLMKIEADPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRRLAY 280

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 281 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 313

[Close]

BLAST of Bhi05M001613 vs. NCBI nr
Match: PQM33579.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora])

HSP 1 Score: 166.4 bits (420), Expect = 7.8e-38
Identity = 82/157 (52.23%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 1   MREVGFMKTSLPYNFMLRLYAHLAKHEKLDELMDEMEEMGIDYDIFTYNIRMTAYAATSN 60
           M+E+G++K  LPYN ML LY+ L +HEKLD L+ EMEE  IDYD  T  I++  YA TS+
Sbjct: 161 MKELGYVKGPLPYNVMLTLYSQLGEHEKLDILVKEMEEKVIDYDSSTLKIQLNLYANTSD 220

Query: 61  ITNMEKLLLKMEADPLVTMDWRAYFNVANGYFKAGLSENSILMLKRAEQLIGDNQKWFAY 120
           I  MEKLL+K+EADPLVT+DW  Y   A G+ KAGL E +  ML+R+EQL+ +  +  AY
Sbjct: 221 IDRMEKLLMKIEADPLVTVDWNGYVVAAKGFLKAGLLEKASSMLRRSEQLVSNQTRRLAY 280

Query: 121 KCLITQYAAMGNKDENKDEVYRVWNLYRNLKRRYNSG 158
           +  ++ YAA+G    NK+EVYR+WN+Y+ + R  NSG
Sbjct: 281 EIFLSLYAAIG----NKEEVYRIWNMYKFMARFKNSG 313

The following BLAST results are available for this feature:

BLAST of Bhi05M001613 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKU6\|PP166_ARATH	2.7e-34	43.95	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
sp\|Q9C7F1\|PPR61_ARATH	1.5e-19	34.18	Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th...	[more]
sp\|Q84JR3\|PP334_ARATH	1.8e-17	33.33	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
sp\|Q3E911\|PP400_ARATH	1.8e-14	29.93	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]
sp\|Q94B59\|PP372_ARATH	9.5e-11	25.85	Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop...	[more]

BLAST of Bhi05M001613 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20710.1	1.5e-35	43.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28020.1	8.1e-21	34.18	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	9.9e-19	33.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	1.0e-15	29.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28000.1	7.3e-14	30.66	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Bhi05M001613 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A251PZS9\|A0A251PZS9_PRUPE	1.8e-38	52.23	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1	[more]
tr\|M5VH82\|M5VH82_PRUPE	1.8e-38	52.23	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1	[more]
tr\|A0A251PZT4\|A0A251PZT4_PRUPE	1.8e-38	52.23	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G136900 PE=4 SV=1	[more]
tr\|A0A2J6MIH9\|A0A2J6MIH9_LACSA	7.5e-37	53.13	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_4X65741 PE=4 SV=1	[more]
tr\|A0A251TLN7\|A0A251TLN7_HELAN	5.4e-35	52.23	Putative tetratricopeptide repeat (TPR)-like superfamily protein OS=Helianthus a...	[more]

BLAST of Bhi05M001613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_007198902.1	2.7e-38	52.23	pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Prunus per...	[more]
ONI17081.1	2.7e-38	52.23	hypothetical protein PRUPE_3G136900 [Prunus persica]	[more]
ONI17082.1	2.7e-38	52.23	hypothetical protein PRUPE_3G136900 [Prunus persica] >ONI17083.1 hypothetical pr...	[more]
PQQ07503.1	6.0e-38	52.23	pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora]	[more]
PQM33579.1	7.8e-38	52.23	pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Bhi05G001613	Bhi05G001613	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Bhi05M001613.exon1	Bhi05M001613.exon1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
cds.Bhi05M001613	cds.Bhi05M001613	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Bhi05M001613	Bhi05M001613-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 46..72 e-value: 0.49 score: 10.7 coord: 13..41 e-value: 0.0062 score: 16.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 13..44 e-value: 0.0011 score: 16.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 1..156 e-value: 8.5E-14 score: 53.6
None	No IPR available	PANTHER	PTHR24015:SF644	SUBFAMILY NOT NAMED	coord: 1..154
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..154