Bhi07G000955 (gene) Wax gourd

Overview
NameBhi07G000955
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionTranscription termination factor like
Locationchr7 : 35796264 .. 35797288 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCGAGGCGACCTTCGATCCTTCAATCGAGTCGAGAGTATCGAACAATCTGAAGCCTAAAATTGAGTTCCTCGAGGAAATTGGGACCGTCAGTTCTTTACTTCCTAAGGTAATTCTATCGAATCCTTCGATTCTGTTTAGGAGCTTAGATTCTCAGTTGAAACCATCATTTTGTTTCATAAAGGAAGTGCATGAATCGGATGAACAAGTAACTGCTGCTATTCGTCGTTCTTCGTGGCTTGAATCGGATGAACAAGGGTATTATGCAATCTAACATTGATGTTTTGATCGCCGAAGGGGCACCTTCTAGGAATATAGCGAAATTGATTGTACTGCAGCCTAGAACTATTATGCAAAAGGTTGATAGAATGGTTTATGCAGTGAAAACAATAAAAAAATTGGGCATTGAAGCAAAGGCTCGCATGTTTGTTCATGCAGTTAAGCAACGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAACGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGTTTTTTACAGCATTTAAGAAAGACCCATTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACTGTAATTTCTTGCCCTAAGTTCTTCACGTATGGACTCGACAAGCGGCTTCGGCCCAAAGTTGTTGAGGTTTTGAACATGAAAAATCTTCTTAAGAAAAACAAAAAGATTGCTTGGGTGCTTATACAAGGGGAGAGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGGGGCAATGTCGCAGCCGAAACCAGATCTGTTCTATAGGATTTGAAGGTTGTAAGTTAAAAATCTTCTTATAGTCTAAATTTCAGCATCATGATCTTCAAATGGGAGAGCATTTTTGTTGGTATTGAGCCTACTGTTTCAAATGCTTCATGAGCTTTTCAAGATCTCTCTCTTCAAGTGGGAGAGTCCTGTTGTTTTC

mRNA sequence

TGTCGAGGCGACCTTCGATCCTTCAATCGAGTCGAGAGTATCGAACAATCTGAAGCCTAAAATTGAGTTCCTCGAGGAAATTGGGACCGTCAGTTCTTTACTTCCTAAGGTAATTCTATCGAATCCTTCGATTCTGTTTAGGAGCTTAGATTCTCAGTTGAAACCATCATTTTGTTTCATAAAGGAAGTGCATGAATCGGATGAACAAGTAACTGCTGCTATTCGTCGTTCTTCGTGGCTTGAATCGGATGAACAAGGGTATTATGCAATCTAACATTGATGTTTTGATCGCCGAAGGGGCACCTTCTAGGAATATAGCGAAATTGATTGTACTGCAGCCTAGAACTATTATGCAAAAGGTTGATAGAATGGTTTATGCAGTGAAAACAATAAAAAAATTGGGCATTGAAGCAAAGGCTCGCATGTTTGTTCATGCAGTTAAGCAACGCTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAACGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGTTTTTTACAGCATTTAAGAAAGACCCATTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACTGTAATTTCTTGCCCTAAGTTCTTCACGTATGGACTCGACAAGCGGCTTCGGCCCAAAGTTGTTGAGGTTTTGAACATGAAAAATCTTCTTAAGAAAAACAAAAAGATTGCTTGGGTGCTTATACAAGGGGAGAGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGGGGCAATGTCGCAGCCGAAACCAGATCTGTTCTATAGGATTTGAAGGTTGTAAGTTAAAAATCTTCTTATAGTCTAAATTTCAGCATCATGATCTTCAAATGGGAGAGCATTTTTGTTGGTATTGAGCCTACTGTTTCAAATGCTTCATGAGCTTTTCAAGATCTCTCTCTTCAAGTGGGAGAGTCCTGTTGTTTTC

Coding sequence (CDS)

ATGAATGATTCAACTTGGAAGAAGAAAATAAACGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGTTTTTTACAGCATTTAAGAAAGACCCATTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGATCCAGGAACTGTAATTTCTTGCCCTAAGTTCTTCACGTATGGACTCGACAAGCGGCTTCGGCCCAAAGTTGTTGAGGTTTTGAACATGAAAAATCTTCTTAAGAAAAACAAAAAGATTGCTTGGGTGCTTATACAAGGGGAGAGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGGGGCAATGTCGCAGCCGAAACCAGATCTGTTCTATAG

Protein sequence

MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVISCPKFFTYGLDKRLRPKVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIPDLMDIYRGNVAAETRSVL
Homology
[Close]
BLAST of Bhi07G000955 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-18
Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 0 

Query: 2   NDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVIS 61
           N S W K   V +  GWSE +   AFKK P C+  SE K+    ++  N   + P ++  
Sbjct: 275 NKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQ 334

Query: 62  CPKFFTYGLDKRLRPK--VVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIPD 121
           CP    + L+KR+ P+  V +VL    L+K++  +  +L+  E+ F+E  V+K+ +E+P+
Sbjct: 335 CPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPE 394

Query: 122 LMDIYRG 127
           LM++Y G
Sbjct: 395 LMNLYLG 401

[Close]
BLAST of Bhi07G000955 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 63.2 bits (152), Expect = 1.5e-10
Identity = 38/128 (29.69%), Postives = 67/128 (52.34%), Query Frame = 0 

Query: 8   KKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVISCPKFFT 67
           K       LG+S  EF    K+ P C+  S E ++   +F     K     ++  P+ F 
Sbjct: 287 KSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFG 346

Query: 68  YGLDKRLRPK--VVEVLNMKNLLKKNKK---IAWVLIQGERSFVENYVLKHLDEIPDLMD 127
           Y ++KR+ P+  ++E L  K LL+K  +   ++ VL   +  F++ YV+KH + +P LM 
Sbjct: 347 YSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYVMKHNELVPTLMA 406

Query: 128 IY-RGNVA 130
           I+ +G+V+
Sbjct: 407 IFTKGSVS 414

[Close]
BLAST of Bhi07G000955 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-10
Identity = 36/125 (28.80%), Postives = 67/125 (53.60%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           +++ T+ +K+ +  + G+SE E     ++ P  + CSE+K+    +F      L+   + 
Sbjct: 245 LSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALA 304

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLL----KKNKKIAWVLIQGERSFVENYVLKHL 120
             P   +Y L+KR+ P  KV+++L  K LL    KK K +  ++   E +F+E YV++  
Sbjct: 305 KRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFG 364

[Close]
BLAST of Bhi07G000955 vs. TAIR10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.6e-09
Identity = 38/123 (30.89%), Postives = 61/123 (49.59%), Query Frame = 0 

Query: 10  INVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVISCPKFFTYG 69
           I     LG+S  EF    K  P C+  S E ++   +F           V+S P  F Y 
Sbjct: 296 IETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYS 355

Query: 70  LDKRLRPK--VVEVLNMKNLLKKN-KKIAWVLIQGERSFVENYVLKHLDE--IPDLMDIY 128
           L+KR+ P+  V++ L  K L++     I+ VL+  ++ F+  YV  H+D+  + +LM IY
Sbjct: 356 LEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]
BLAST of Bhi07G000955 vs. TAIR10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 44.3 bits (103), Expect = 7.1e-05
Identity = 27/75 (36.00%), Postives = 45/75 (60.00%), Query Frame = 0 

Query: 59  VISCPKFFTYGLDKRLRPK--VVEVLNMKNLL-KKNKKIAWVLIQGERSFVENYVLKHLD 118
           V+  P    Y L+KR+ P+  V++ L  K L+  +N  I+ VL+  ++ F++ YV+KH  
Sbjct: 376 VVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKHDK 435

Query: 119 EIPDLMDIY-RGNVA 130
            +P LM I+ RG V+
Sbjct: 436 LVPKLMAIFNRGRVS 450

[Close]
BLAST of Bhi07G000955 vs. TrEMBL
Match: tr|A0A1S3BEQ3|A0A1S3BEQ3_CUCME (uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.1e-51
Identity = 103/138 (74.64%), Postives = 119/138 (86.23%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           ++DSTWKKKINV+KSLGWSE E FTAFKKDP  L CSEEKMRDVADFCFNTAKLDPG+VI
Sbjct: 237 VSDSTWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVI 296

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
            CPK F   +DKRL+P  KV+EVL +KNLL KN  IAWVL+Q ER+FV+ +V++HLDEIP
Sbjct: 297 ICPKIFKCSVDKRLQPRYKVLEVLKVKNLL-KNVNIAWVLVQSERAFVKKFVVRHLDEIP 356

Query: 121 DLMDIYRGNVAAETRSVL 137
           +LMDIYRGNV AET+SVL
Sbjct: 357 NLMDIYRGNVTAETKSVL 373

[Close]
BLAST of Bhi07G000955 vs. TrEMBL
Match: tr|A0A1S3CSA2|A0A1S3CSA2_CUCME (uncharacterized protein LOC103504258 OS=Cucumis melo OX=3656 GN=LOC103504258 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 106/139 (76.26%), Postives = 118/139 (84.89%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           M+DSTWKKK+ V+KSLGWSEKE FTAFKKDP  L CSE+KMRDVADFCFNTAKLDPGTVI
Sbjct: 30  MSDSTWKKKVTVMKSLGWSEKEIFTAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVI 89

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKI--AWVLIQGERSFVENYVLKHLDE 120
           S P FF Y +DKRLRP  KV+EVL +KNLL KNKKI  AW   QGER FV+N V+KHLDE
Sbjct: 90  SYPVFFKYSVDKRLRPRYKVLEVLKVKNLL-KNKKIALAWWFTQGEREFVQNNVVKHLDE 149

Query: 121 IPDLMDIYRGNVAAETRSV 136
           IP+LMDIYRGN A+ET+SV
Sbjct: 150 IPNLMDIYRGNDASETKSV 167

[Close]
BLAST of Bhi07G000955 vs. TrEMBL
Match: tr|A0A1S3BDE1|A0A1S3BDE1_CUCME (transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103488812 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 105/138 (76.09%), Postives = 118/138 (85.51%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           M+DSTWKKKINV+KSLGWS+KE FTAFK+ P  L CSEEK+RDVADFCFNTAKLDPGT+I
Sbjct: 237 MSDSTWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLI 296

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
           S PK F    DKRLRP  KV+EVL +KNLL KNKKIA VL++GER FVE YV+KHLDEIP
Sbjct: 297 SYPKLFKLSFDKRLRPRYKVLEVLKVKNLL-KNKKIASVLVEGERRFVEKYVVKHLDEIP 356

Query: 121 DLMDIYRGNVAAETRSVL 137
           +LMDIY GNV AET+SVL
Sbjct: 357 NLMDIYVGNVEAETKSVL 373

[Close]
BLAST of Bhi07G000955 vs. TrEMBL
Match: tr|A0A1S4DWY9|A0A1S4DWY9_CUCME (uncharacterized protein LOC107990789 OS=Cucumis melo OX=3656 GN=LOC107990789 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.8e-50
Identity = 105/137 (76.64%), Postives = 117/137 (85.40%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           ++DS W  KINVLKSLGWSEKE F AFKKDP  L CSE+KMRDVADFCFNTAKLDPGTVI
Sbjct: 53  LSDSNWTNKINVLKSLGWSEKEIFAAFKKDPNYLGCSEKKMRDVADFCFNTAKLDPGTVI 112

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
           S P FF   +DKRLRP  KV+EVL +KNLL KNKKIA VL+QGE++FVE YV+KHLDEIP
Sbjct: 113 SYPVFFKSSVDKRLRPRYKVLEVLKVKNLL-KNKKIAGVLLQGEKTFVEKYVVKHLDEIP 172

Query: 121 DLMDIYRGNVAAETRSV 136
           +LMDIYRGNV AET+SV
Sbjct: 173 NLMDIYRGNVEAETKSV 188

[Close]
BLAST of Bhi07G000955 vs. TrEMBL
Match: tr|A0A1S3BEK7|A0A1S3BEK7_CUCME (uncharacterized protein LOC103488825 OS=Cucumis melo OX=3656 GN=LOC103488825 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.5e-49
Identity = 104/139 (74.82%), Postives = 118/139 (84.89%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           M+DSTWKKKINV+KSLGWSEKE  TAFK+ P CL CSEEKMRDVADFCFNTAKLDPGT+I
Sbjct: 256 MSDSTWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLI 315

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKI--AWVLIQGERSFVENYVLKHLDE 120
           S P FF   ++KRLRP  KV+EVL +KNLL +NKKI  AW  +QGER FVEN V+KHLDE
Sbjct: 316 SNPVFFKLSVNKRLRPRYKVLEVLKVKNLL-RNKKIALAWWFMQGEREFVENNVVKHLDE 375

Query: 121 IPDLMDIYRGNVAAETRSV 136
           IP+LMDIYRGN A+ET+SV
Sbjct: 376 IPNLMDIYRGNDASETQSV 393

[Close]
BLAST of Bhi07G000955 vs. NCBI nr
Match: XP_022957148.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 109/138 (78.99%), Postives = 119/138 (86.23%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           MND+TWKKKINVLKSLGWSEKE  TAFKKDP+CLACSEEKMR VADFC NTAKLDP TVI
Sbjct: 237 MNDTTWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVI 296

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
           S PKFF YGLDK LRP  KVVEVL +K L+ KN KIAW+L+  ER FV+NYVLKHLDE+P
Sbjct: 297 SNPKFFMYGLDKWLRPRFKVVEVLKVKKLI-KNTKIAWLLLLDERIFVKNYVLKHLDEVP 356

Query: 121 DLMDIYRGNVAAETRSVL 137
           DLMDI+RGN AAE+R VL
Sbjct: 357 DLMDIFRGNAAAESRPVL 373

[Close]
BLAST of Bhi07G000955 vs. NCBI nr
Match: XP_022983900.1 (transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 216.1 bits (549), Expect = 7.5e-53
Identity = 107/138 (77.54%), Postives = 117/138 (84.78%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           MND+TWKKKINVLKSLGWSEKE  TAFK+DP CLACSEEKMR  ADFC NTAKLDP TVI
Sbjct: 237 MNDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVI 296

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
           S PKFF YGLDK LRP  KV+EVL +K L+ KN+KIAW+L  GER FV NYVLK+LDE+P
Sbjct: 297 SYPKFFMYGLDKWLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGEREFVTNYVLKYLDEVP 356

Query: 121 DLMDIYRGNVAAETRSVL 137
           DLMDIYRGN AAE+R VL
Sbjct: 357 DLMDIYRGNAAAESRPVL 373

[Close]
BLAST of Bhi07G000955 vs. NCBI nr
Match: XP_022957147.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 2.2e-52
Identity = 107/138 (77.54%), Postives = 118/138 (85.51%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           ++D+TWKKKINVLKSLGWSEKE  TAFK+DP+CLACSEEKMR VADFC NTAKLDP TVI
Sbjct: 237 ISDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVI 296

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
           S PKFF  GLDK LRP  KVVEVL +K L+ KN KIAW+L  GER+FV NYVLKHLDE+P
Sbjct: 297 SYPKFFMSGLDKCLRPRFKVVEVLKVKKLI-KNTKIAWLLFLGERNFVTNYVLKHLDEVP 356

Query: 121 DLMDIYRGNVAAETRSVL 137
           DLMDIYRGN AAE+R VL
Sbjct: 357 DLMDIYRGNAAAESRPVL 373

[Close]
BLAST of Bhi07G000955 vs. NCBI nr
Match: XP_022983916.1 (transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 214.5 bits (545), Expect = 2.2e-52
Identity = 106/138 (76.81%), Postives = 119/138 (86.23%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           ++D+TWKKKINVLKSLGWSEKE  TAFK+DP+CLACSEEKMR VADFC NTAKLDP TVI
Sbjct: 237 ISDTTWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVI 296

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
           S PKFF  GLDK LRP  KV+EVL +K L+ KN+KIAW+L  GER+FV NYVLKHLDE+P
Sbjct: 297 SYPKFFMSGLDKCLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGERNFVTNYVLKHLDEVP 356

Query: 121 DLMDIYRGNVAAETRSVL 137
           DLMDIYRGN AAE+R VL
Sbjct: 357 DLMDIYRGNAAAESRPVL 373

[Close]
BLAST of Bhi07G000955 vs. NCBI nr
Match: XP_023529167.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.6 bits (540), Expect = 8.3e-52
Identity = 106/138 (76.81%), Postives = 118/138 (85.51%), Query Frame = 0 

Query: 1   MNDSTWKKKINVLKSLGWSEKEFFTAFKKDPFCLACSEEKMRDVADFCFNTAKLDPGTVI 60
           MND+TWKKKINV KSLGWSEKE  TAFK+DP+CLACSEEKMR VADFCFN AKLDP TVI
Sbjct: 237 MNDTTWKKKINVFKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVI 296

Query: 61  SCPKFFTYGLDKRLRP--KVVEVLNMKNLLKKNKKIAWVLIQGERSFVENYVLKHLDEIP 120
           S P FF  GLDKRLRP  KVVEVL +K L+ +N+KIA +L+ GER FV+NYVLKHLDE+P
Sbjct: 297 SYPTFFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVLGERIFVKNYVLKHLDEVP 356

Query: 121 DLMDIYRGNVAAETRSVL 137
           DLMDIYRGN AAE+R VL
Sbjct: 357 DLMDIYRGNAAAESRPVL 373

The following BLAST results are available for this feature:
BLAST of Bhi07G000955 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi07G000955 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.11.9e-1833.86Mitochondrial transcription termination factor family protein[more]
AT1G61990.11.5e-1029.69Mitochondrial transcription termination factor family protein[more]
AT5G64950.12.5e-1028.80Mitochondrial transcription termination factor family protein[more]
AT1G61970.13.6e-0930.89Mitochondrial transcription termination factor family protein[more]
AT3G46950.17.1e-0536.00Mitochondrial transcription termination factor family protein[more]
BLAST of Bhi07G000955 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BEQ3|A0A1S3BEQ3_CUCME2.1e-5174.64uncharacterized protein LOC103488865 OS=Cucumis melo OX=3656 GN=LOC103488865 PE=... [more]
tr|A0A1S3CSA2|A0A1S3CSA2_CUCME1.3e-5076.26uncharacterized protein LOC103504258 OS=Cucumis melo OX=3656 GN=LOC103504258 PE=... [more]
tr|A0A1S3BDE1|A0A1S3BDE1_CUCME1.3e-5076.09transcription termination factor MTERF2, chloroplastic-like OS=Cucumis melo OX=3... [more]
tr|A0A1S4DWY9|A0A1S4DWY9_CUCME1.8e-5076.64uncharacterized protein LOC107990789 OS=Cucumis melo OX=3656 GN=LOC107990789 PE=... [more]
tr|A0A1S3BEK7|A0A1S3BEK7_CUCME1.5e-4974.82uncharacterized protein LOC103488825 OS=Cucumis melo OX=3656 GN=LOC103488825 PE=... [more]
BLAST of Bhi07G000955 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022957148.11.5e-5378.99transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata][more]
XP_022983900.17.5e-5377.54transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima][more]
XP_022957147.12.2e-5277.54transcription termination factor MTERF5, chloroplastic-like [Cucurbita moschata][more]
XP_022983916.12.2e-5276.81transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima][more]
XP_023529167.18.3e-5276.81transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subs... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi07M000955Bhi07M000955mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 3..105
e-value: 2.0E-15
score: 56.5
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 1..117
e-value: 2.4E-11
score: 45.3
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 1..129
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 1..129

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi07G000955CSPI05G20590Wild cucumber (PI 183967)cpiwgoB507
Bhi07G000955Cucsa.281210Cucumber (Gy14) v1cgywgoB565
Bhi07G000955CmaCh04G012890Cucurbita maxima (Rimu)cmawgoB0892
Bhi07G000955CmoCh04G013570Cucurbita moschata (Rifu)cmowgoB0891
Bhi07G000955Lsi04G007560Bottle gourd (USVL1VR-Ls)lsiwgoB391
Bhi07G000955CsGy5G020100Cucumber (Gy14) v2cgybwgoB478
Bhi07G000955Carg02027Silver-seed gourdcarwgoB0984
Bhi07G000955CsaV3_5G029360Cucumber (Chinese Long) v3cucwgoB514
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi07G000955Cucumber (Gy14) v2cgybwgoB480
Bhi07G000955Cucurbita maxima (Rimu)cmawgoB0545
Bhi07G000955Cucurbita maxima (Rimu)cmawgoB0910
Bhi07G000955Cucurbita moschata (Rifu)cmowgoB0541
Bhi07G000955Cucurbita moschata (Rifu)cmowgoB0910
Bhi07G000955Cucurbita pepo (Zucchini)cpewgoB0056
Bhi07G000955Cucurbita pepo (Zucchini)cpewgoB0556
Bhi07G000955Wild cucumber (PI 183967)cpiwgoB510
Bhi07G000955Cucumber (Chinese Long) v3cucwgoB516
Bhi07G000955Cucumber (Chinese Long) v2cuwgoB502
Bhi07G000955Cucumber (Chinese Long) v2cuwgoB504
Bhi07G000955Bottle gourd (USVL1VR-Ls)lsiwgoB382
Bhi07G000955Melon (DHL92) v3.6.1medwgoB072
Bhi07G000955Melon (DHL92) v3.6.1medwgoB085
Bhi07G000955Melon (DHL92) v3.5.1mewgoB074
Bhi07G000955Melon (DHL92) v3.5.1mewgoB084
Bhi07G000955Watermelon (Charleston Gray)wcgwgoB171
Bhi07G000955Watermelon (97103) v2wgowmbB516
Bhi07G000955Watermelon (97103) v2wgowmbB527
Bhi07G000955Watermelon (97103) v1wgowmB563
Bhi07G000955Watermelon (97103) v1wgowmB564
Bhi07G000955Silver-seed gourdcarwgoB0853
Bhi07G000955Silver-seed gourdcarwgoB0993
Bhi07G000955Cucumber (Gy14) v1cgywgoB340