CmaCh04G012890 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G012890
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMitochondrial transcription termination factor family protein, putative
LocationCma_Chr04 : 6574434 .. 6575555 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAATTTCCTCGAAATTTCTGCTCTATTTCATCCAAAACCGGTTCGTCAATACGGTTTCTAGTTCTACATTGCCTTCAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACACTTGTGGGCTGGCTGCGGATTCTCCTTCTTCCGCCGGTCGAAAGCTTCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCAACCCTCTATCCTTCAATCGAGAGTCTACAACAATCTGAAGCCTAAATTCGAGTTCCTCGAGGATATAGGGTTTGTCGGTCCTTTACTTGCAAAGGTAATTTTATTGAACCCCTCTATTCTGCTGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGAATCGGATGAGCAGGCTAATGTTGCTATTCGTCGATCTTCGTGGCTTCTAACTTCTAATTTGAAGGGTGTTATGCAATCTAACGTTAATGTTTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGGGCAGCAACCAAGAACTATTATGCAAAAGGTTGATAGAATGGTTTGTGCAGTGAAGAAGGTCAAGGAATTGGGCGTTGAACCACAGACTCGTATGTTTGTTCGTGCGCTTCGTGTAGTGTTGTCCATGAATGACACAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAGAGACCCACTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGCTGCAGATTTCTGTTTGAACACTGCAAAATTGGACCCAGAAACTGTAATTTCTTACCCCAAGTTCTTCATGTATGGACTGGACAAGTGGCTCCGGCCAAGGTTCAAAGTTCTTGAGGTTTTGAAGGTCAAAAAACTGATTAAGAACAGAAAGATTGCTTGGTTACTTTTTCTAGGGGAGAGAGAGTTTGTCACGAATTATGTTCTTAAGTATTTGGATGAAGTCCCAGATCTTATGGACATATACAGGGGCAATGCGGCAGCCGAATCCAGACCTGTTCTATAG

mRNA sequence

ATGTCTAAAATTTCCTCGAAATTTCTGCTCTATTTCATCCAAAACCGGTTCGTCAATACGGTTTCTAGTTCTACATTGCCTTCAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACACTTGTGGGCTGGCTGCGGATTCTCCTTCTTCCGCCGGTCGAAAGCTTCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCAACCCTCTATCCTTCAATCGAGAGTCTACAACAATCTGAAGCCTAAATTCGAGTTCCTCGAGGATATAGGGTTTGTCGGTCCTTTACTTGCAAAGGTAATTTTATTGAACCCCTCTATTCTGCTGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGAATCGGATGAGCAGGCTAATGTTGCTATTCGTCGATCTTCGTGGCTTCTAACTTCTAATTTGAAGGGTGTTATGCAATCTAACGTTAATGTTTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGGGCAGCAACCAAGAACTATTATGCAAAAGGTTGATAGAATGGTTTGTGCAGTGAAGAAGGTCAAGGAATTGGGCGTTGAACCACAGACTCGTATGTTTGTTCGTGCGCTTCGTGTAGTGTTGTCCATGAATGACACAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAGAGACCCACTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGCTGCAGATTTCTGTTTGAACACTGCAAAATTGGACCCAGAAACTGTAATTTCTTACCCCAAGTTCTTCATGTATGGACTGGACAAGTGGCTCCGGCCAAGGTTCAAAGTTCTTGAGGTTTTGAAGGTCAAAAAACTGATTAAGAACAGAAAGATTGCTTGGTTACTTTTTCTAGGGGAGAGAGAGTTTGTCACGAATTATGTTCTTAAGTATTTGGATGAAGTCCCAGATCTTATGGACATATACAGGGGCAATGCGGCAGCCGAATCCAGACCTGTTCTATAG

Coding sequence (CDS)

ATGTCTAAAATTTCCTCGAAATTTCTGCTCTATTTCATCCAAAACCGGTTCGTCAATACGGTTTCTAGTTCTACATTGCCTTCAGCGTCTGTGTCTACGATTGAATTCCTCAAGAACACTTGTGGGCTGGCTGCGGATTCTCCTTCTTCCGCCGGTCGAAAGCTTCAATTCGATGAAAAAAGCGCCAAGAAGTACGAAGCCGTTCTTGGTTTCTTGAAATCATATGGATTCGAGAATTCGCAGATCGCCAAGTTGATCGCGAAGCAACCCTCTATCCTTCAATCGAGAGTCTACAACAATCTGAAGCCTAAATTCGAGTTCCTCGAGGATATAGGGTTTGTCGGTCCTTTACTTGCAAAGGTAATTTTATTGAACCCCTCTATTCTGCTGAGGGGCTTAGATTCTCATTTGAAACCATCGTTTTGTTTCATTAAGGAAATGCTTGAATCGGATGAGCAGGCTAATGTTGCTATTCGTCGATCTTCGTGGCTTCTAACTTCTAATTTGAAGGGTGTTATGCAATCTAACGTTAATGTTTTGCTCGGTGAAGGGGTACCTTCTAGGAATATATCGAAATTGATTGGGCAGCAACCAAGAACTATTATGCAAAAGGTTGATAGAATGGTTTGTGCAGTGAAGAAGGTCAAGGAATTGGGCGTTGAACCACAGACTCGTATGTTTGTTCGTGCGCTTCGTGTAGTGTTGTCCATGAATGACACAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTGGGATGGTCTGAGAAGGAGATTTTAACAGCATTTAAGAGAGACCCACTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGGGCTGCTGCAGATTTCTGTTTGAACACTGCAAAATTGGACCCAGAAACTGTAATTTCTTACCCCAAGTTCTTCATGTATGGACTGGACAAGTGGCTCCGGCCAAGGTTCAAAGTTCTTGAGGTTTTGAAGGTCAAAAAACTGATTAAGAACAGAAAGATTGCTTGGTTACTTTTTCTAGGGGAGAGAGAGTTTGTCACGAATTATGTTCTTAAGTATTTGGATGAAGTCCCAGATCTTATGGACATATACAGGGGCAATGCGGCAGCCGAATCCAGACCTGTTCTATAG

Protein sequence

MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPKFFMYGLDKWLRPRFKVLEVLKVKKLIKNRKIAWLLFLGEREFVTNYVLKYLDEVPDLMDIYRGNAAAESRPVL
Homology
[Close]
BLAST of CmaCh04G012890 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.9e-07
Identity = 52/228 (22.81%), Postives = 108/228 (47.37%), Query Frame = 1 

Query: 69  LGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAKVILLNPSI 128
           L +L S G ++  I +++ +QP ILQ  V NNLK    FL  +G     + +++   PS+
Sbjct: 223 LDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSL 282

Query: 129 LLRGLDSHLKPSFCF-IKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVLLGE-GVP 188
               +++ L+P+  + I+E+   +      ++ S  +L   L     +    L  E G P
Sbjct: 283 FSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAP 342

Query: 189 SRNISKLIGQQPRTIMQKV-DRMVCAVKKVKELGV-EPQTRMFVRALRVVLSMN-DTTWK 248
             ++ K++ + P+ +   + D  +  +  ++ +G+        + +L  VLS++ +   K
Sbjct: 343 RDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLK 402

Query: 249 KKINVLKSLGWSEKEILTAFKRDPLCLACS-EEKMRAAADFCLNTAKL 291
            K   L +   +E  ILT +   P+ L+ S ++++R    F +   K+
Sbjct: 403 PKYMYLVNELNNEVHILTKY---PMYLSLSLDQRIRPRHRFLVELKKV 447

[Close]
BLAST of CmaCh04G012890 vs. Swiss-Prot
Match: MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.9e-06
Identity = 67/295 (22.71%), Postives = 123/295 (41.69%), Query Frame = 1 

Query: 63  KKYEAVLGF------------LKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLED 122
           ++Y  VLGF            L   G    +I  ++ + P IL  RV   +KP  E+LE 
Sbjct: 237 ERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEV 296

Query: 123 IGFVGPLLAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLK 182
           +G      A++I   P IL   LD  +KP+   +++    +      I +   ++  +LK
Sbjct: 297 LGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLK 356

Query: 183 GVMQSNVNVLLGE-GVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVE-PQTRMFV 242
             + +   +L     +   ++  LI + P+ +      M+  +  + + G    QTR  V
Sbjct: 357 PKLDTQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMV 416

Query: 243 RALRVVLSMNDTTWKKKINVLK-SLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNT 302
                VL++N       + ++K S  + +KE+     + PL                   
Sbjct: 417 IGCPQVLALN-------LGIMKLSFEYFQKEM-----KRPL------------------- 476

Query: 303 AKLDPETVISYPKFFMYGLDKWLRPRFKVLEVLKVKKLIKNRKIAWLLFLGEREF 343
                + ++ +P FF YGL+  ++PR K +    +KK IK   +AW+L   + +F
Sbjct: 477 -----QDLVDFPAFFTYGLESTVKPRHKKI----IKKGIK-CSLAWMLNCSDEKF 490

[Close]
BLAST of CmaCh04G012890 vs. TrEMBL
Match: A0A067L028_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 2.3e-94
Identity = 187/374 (50.00%), Postives = 258/374 (68.98%), Query Frame = 1 

Query: 9   LLYFIQNRFVNTVSS------STLP-----SASVSTIEFLKNTCGLAADSPSSAGRKLQF 68
           L + IQ RF+N  ++      S LP     S+S  T++FL  +CGL   S  S  R LQ 
Sbjct: 9   LFFHIQKRFLNASATGKLSPRSPLPTTSNSSSSTFTVQFLVKSCGLPLKSARSVSRTLQL 68

Query: 69  DEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPL 128
           DEK+ ++Y++V+  LKS+ F  +Q+AKLI K+P+ILQ RV NNL PKF +L++ GF G L
Sbjct: 69  DEKNQQRYQSVMELLKSHNFSGTQVAKLIVKKPAILQCRVENNLFPKFNYLKENGFAGEL 128

Query: 129 LAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNV 188
           L ++ L NP I+ R L+SH+KP+F F++ +L+SD++   AIRRSSWLLTS+LKG MQ N+
Sbjct: 129 LPELFLSNPVIIQRALNSHIKPTFDFLRSVLDSDDKVVAAIRRSSWLLTSDLKGRMQPNI 188

Query: 189 NVLLGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSM 248
           ++L+  GVP+ +I K++  QPR I Q  DRMV AV  V  LG++P  R FV A+RV++SM
Sbjct: 189 DLLVKVGVPAHSIEKIVILQPRVISQNHDRMVHAVHAVNNLGIQPTARRFVHAVRVMMSM 248

Query: 249 NDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVIS 308
           +D TWKKK  +LK++GWSE+EI +AFK+ P  LA SEEK + A DF LNT KL P+T+I+
Sbjct: 249 SDFTWKKKFELLKNVGWSEEEIFSAFKKKPHFLASSEEKFKNAMDFYLNTMKLQPQTLIA 308

Query: 309 YPKFFMYGLDKWLRPRFKVLEVLKVKKLIKNR-KIAWLLFLGEREFVTNYVLKYLDEVPD 368
            P F M+ +DK LRPR+ VL+ L+ KKLI+ R KI WLL + E+ F  N+V KY  EVP 
Sbjct: 309 SPIFLMHSVDKRLRPRYNVLQALESKKLIEGRKKIEWLLLISEKNFQKNFVSKYAAEVPG 368

Query: 369 LMDIYRGNAAAESR 371
           L+++Y G   A  R
Sbjct: 369 LLEMYLGTRNATKR 382

[Close]
BLAST of CmaCh04G012890 vs. TrEMBL
Match: M5XTI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 8.0e-92
Identity = 177/366 (48.36%), Postives = 254/366 (69.40%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60
           M+  + + LL  +Q R + T+ + T    S  T+E+L  +CGL  +S  SA +KLQ D+K
Sbjct: 1   MANTALRNLLSLVQKRLLATLPTPTAALCSSFTVEYLVKSCGLPLESAISASKKLQIDKK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120
              + +++L FLKS GF+++QIAKLI K+P+IL  +V +NL+PKF FL + GFVG  L +
Sbjct: 61  QTHRIDSMLKFLKSNGFDDAQIAKLITKRPTILHYKVLSNLEPKFNFLIENGFVGQNLPE 120

Query: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180
           ++LLNP IL R LDSH+KP+  F+K++L +++    A +RSSWLL  +  G +Q NV +L
Sbjct: 121 LVLLNPVILTRSLDSHIKPAVQFLKKLLSTNDML-AAAKRSSWLLNMDSVGTIQPNVALL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240
             EGVP   I+K+I  QPRT+MQ VDRM  AV+ +K+LG++P   MFVRA+RV++SM ++
Sbjct: 181 QSEGVPLDVITKMILFQPRTVMQNVDRMAYAVRTIKDLGIDPTGPMFVRAVRVMISMKES 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300
           TWK+KI   KS GWSE  +L+ FKR P CLACSEEK+    DF LNT KL+PET+I+ P 
Sbjct: 241 TWKRKIEFFKSYGWSEDVVLSVFKRQPFCLACSEEKLGRVMDFFLNTVKLEPETMIANPM 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIK--NRKIAWLLFLGEREFVTNYVLKYLDEVPDLM 360
             M+G +K + PR+ V ++L  K+LI   N+++ WL+   ER F+  YVLKYL+EVPDL+
Sbjct: 301 LLMHGFEKTVLPRYNVFKILVSKELINRDNKRLCWLITQSERRFLDYYVLKYLNEVPDLL 360

Query: 361 DIYRGN 365
           +IY  +
Sbjct: 361 EIYHSS 365

[Close]
BLAST of CmaCh04G012890 vs. TrEMBL
Match: A5CAF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021879 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.2e-91
Identity = 182/374 (48.66%), Postives = 257/374 (68.72%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVS----------SSTLPSASVSTIEFLKNTCGLAADSPSS 60
           M+K+  K LL  +Q RF+ T S          SSTL S S  T +FL  +CGL  DS  S
Sbjct: 1   MAKLHFKSLLCLMQKRFLTTSSTLYTSSLXSSSSTLLSPSY-TAQFLVKSCGLPLDSAIS 60

Query: 61  AGRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLED 120
             +KL  DE   +K+E+VL FLKS+GF ++ +AKL++K P ILQ+RV + LK K ++L D
Sbjct: 61  ISQKLNLDENKRQKHESVLEFLKSHGFSDTHVAKLVSKCPPILQARV-DMLKLKXDYLHD 120

Query: 121 IGFVGPLLAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLK 180
            GFVGP+L ++I+ NP+IL R LD  +KPSF F+KE LE++E+   AI+R SWLLT +LK
Sbjct: 121 SGFVGPVLHELIVSNPAILRRSLDKQIKPSFDFLKEFLETNEKIAAAIKRESWLLTFDLK 180

Query: 181 GVMQSNVNVLLGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRA 240
            +++ N  +L+ EGVP   +SKLI  QPR IMQ VDRMV A ++ + LG++P   ++V A
Sbjct: 181 KILKPNTFLLINEGVPHSRMSKLITLQPRVIMQHVDRMVYATERARSLGIKPTDPIYVTA 240

Query: 241 LRVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKL 300
           + V+LSM ++TWK+K+ + +  G++E EIL A KR P  +ACSEEK+++  +F  NT KL
Sbjct: 241 ITVILSMTESTWKRKVELYEKFGFTEVEILKAIKRQPHFMACSEEKIKSLMNFYTNTMKL 300

Query: 301 DPETVISYPKFFMYGLDKWLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGEREFVTNYVLK 360
            P  + +YP+  +Y  D  +RPRF VL +L  KKL+ K++KIAWLL   E  F+TNYV+K
Sbjct: 301 KPSAIATYPRLLLYSFDARIRPRFNVLNILASKKLLKKHKKIAWLLTQSEASFLTNYVIK 360

Query: 361 YLDEVPDLMDIYRG 364
           Y+D+VPDLM++YRG
Sbjct: 361 YVDQVPDLMELYRG 372

[Close]
BLAST of CmaCh04G012890 vs. TrEMBL
Match: F6HV96_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00030 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.4e-90
Identity = 179/375 (47.73%), Postives = 258/375 (68.80%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVS-----------TIEFLKNTCGLAADSPS 60
           M+K+  + LL  +Q RF+ T  SSTL ++S+S           T +FL  +CGL  DS  
Sbjct: 1   MAKLHFQSLLCLMQKRFLTT--SSTLYTSSLSSSSSTLLSPSYTAQFLVKSCGLPLDSAI 60

Query: 61  SAGRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLE 120
           S  +KL  DE   +K+E+VL FLKS+GF ++ +AKL++K P ILQ+RV + LK K ++L 
Sbjct: 61  SISQKLNLDENKRQKHESVLEFLKSHGFSDTHVAKLVSKCPPILQARV-DMLKLKIDYLH 120

Query: 121 DIGFVGPLLAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNL 180
           D GFVGP+L ++I+ NP+IL R LD  +KPSF F+KE LE++E+   AI+R SWLLT +L
Sbjct: 121 DSGFVGPVLHELIVSNPAILRRSLDKQIKPSFDFLKEFLETNEKIAAAIKRESWLLTFDL 180

Query: 181 KGVMQSNVNVLLGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVR 240
           K +++ N  +L+ EGVP   +SKLI  QPR IMQ VDRMV A ++ + LG++P   ++V 
Sbjct: 181 KKILKPNTFLLINEGVPHSRMSKLITLQPRVIMQHVDRMVYATERARSLGIKPTDPIYVT 240

Query: 241 ALRVVLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAK 300
           A+ V+LSM ++TWK+K+ + +  G++E EIL A KR P  +ACSEEK+++  +F  NT K
Sbjct: 241 AITVILSMTESTWKRKVELYEKFGFTEVEILKAIKRQPHFMACSEEKIKSLMNFYTNTMK 300

Query: 301 LDPETVISYPKFFMYGLDKWLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGEREFVTNYVL 360
           L P  + +YP+  +Y  D  +RPRF VL +L  KKL+ K++KIAWLL   E  F+ NYV+
Sbjct: 301 LKPSAIATYPRLLLYSFDARIRPRFNVLNILASKKLLKKHKKIAWLLTQSEASFLNNYVI 360

Query: 361 KYLDEVPDLMDIYRG 364
           KY+D+VPDLM++YRG
Sbjct: 361 KYVDQVPDLMELYRG 372

[Close]
BLAST of CmaCh04G012890 vs. TrEMBL
Match: B9GLU5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.4e-90
Identity = 183/376 (48.67%), Postives = 258/376 (68.62%), Query Frame = 1 

Query: 2   SKISSKFLLYFIQNRFVNTVSSST--------LPSASVSTIEFLKNTCGLAADSPSSAGR 61
           +K++ + LL  +Q RF++T SSST         PS+S  T++FL N+CGL + S  S  +
Sbjct: 3   TKVAMRNLLPLLQKRFLSTSSSSTPTLSPLSTAPSSSF-TVDFLINSCGLPSKSALSVSQ 62

Query: 62  KLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGF 121
           KLQ DEKS +K ++VL FLK++GF+ + + KLI K+P +L+  V  NLKPKFEFL   GF
Sbjct: 63  KLQLDEKSIQKPQSVLEFLKAHGFKETHVVKLIEKRPDVLRRGVDTNLKPKFEFLIANGF 122

Query: 122 VGPLLAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVM 181
           VG LL ++I  NP++L R L+S++KP F + K +L S++    A +R +  LT + K ++
Sbjct: 123 VGKLLPELITSNPNVLERALESNMKPCFEYFKSILGSNDMIVAASKRCAVFLTYDWKSII 182

Query: 182 QSNVNVLLGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRV 241
           Q NV +L+ EGVP   + K+I  QPR I Q+ DRMV AV  VK LG+EP+  MF+ ALR 
Sbjct: 183 QPNVELLIKEGVPEERVVKMIVAQPRIIYQRRDRMVYAVNAVKNLGLEPKAPMFIYALRS 242

Query: 242 VLSMNDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPE 301
           +LSMN+ TWKKKI V+KS GW+E+EIL AFK+ P  L+ SEEKMR + DF LNT K++ +
Sbjct: 243 ILSMNEFTWKKKIEVMKSFGWTEEEILRAFKQYPFQLSSSEEKMRKSMDFLLNTIKMERQ 302

Query: 302 TVISYPKFFMYGLDKWLRPRFKVLEVLKVKKLIK-NRKIAWLLFLGEREFVTNYVLKYLD 361
            +I+ PKF MY  +K LRPR+ VL++LK KKLI+  +K  +LL + E+ F+ NYV KY D
Sbjct: 303 AIIACPKFLMYSTEKRLRPRYDVLKILKSKKLIEIGKKTNYLLTVSEKNFLENYVTKYAD 362

Query: 362 EVPDLMDIYRGNAAAE 369
           +VP L+++YRG    E
Sbjct: 363 KVPGLLEVYRGTTKTE 377

[Close]
BLAST of CmaCh04G012890 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-50
Identity = 112/333 (33.63%), Postives = 183/333 (54.95%), Query Frame = 1 

Query: 33  TIEFLKNTCGLAADSPSSAGRKLQFDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSI 92
           T+ +L ++CGL+ DS + A RKL  D  S ++   VL  L+ +GF  +QI+ L+ K+P +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSRVYNNLKPKFEFLEDIGFVGPLLAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDE 152
           L +   + L PK  F   IG    LLA+ +  +P+IL R L + L PS+ F+K +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 QANVAIRRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNISKLIGQQPRTIMQKVDRMVCAV 212
           +   A+RR++W+   +    +  N+N +   GVP + I  L+   P  +MQK        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KKVKELGVEPQTRMFVRALRVVLSM-NDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLA 272
           K+ +E+G  PQ   FV A+  +    N + W K   V +  GWSE +I+ AFK+ P C+ 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRAAADFCLNTAKLDPETVISYPKFFMYGLDKWLRPRFKVLEVLKVKKLIK-NRK 332
            SE K+    ++ +N   + P ++   P    + L+K + PR  V +VL    L+K +  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IAWLLFLGEREFVTNYVLKYLDEVPDLMDIYRG 364
           +  LL   E+ F+   V+KY +E+P+LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of CmaCh04G012890 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 149.4 bits (376), Expect = 4.3e-36
Identity = 96/353 (27.20%), Postives = 171/353 (48.44%), Query Frame = 1 

Query: 18  VNTVSSSTL----PSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEKSAKKYEAVLGFLK 77
           V+ V S  L    P     T+ +L ++CGL+ +S  S  R ++    S+KK ++VL   K
Sbjct: 39  VSQVKSENLEKQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFK 98

Query: 78  SYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAKVILLNPSILLRGL 137
            +GF N QI  +I   P +L     + + PK  F   IGF     AK+I  +P +L   L
Sbjct: 99  DHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSL 158

Query: 138 DSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNISKL 197
              L P +  +K +L  +E     ++R     +  +   +   V++    GVP ++I  L
Sbjct: 159 HKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWL 218

Query: 198 IGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDTTWKKKINVLKSLG 257
           +   P T   +  R    + +V   G +P+   FV A+      +++  ++K  + +  G
Sbjct: 219 VQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFG 278

Query: 258 WSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPKFFMYGLDKWLRPR 317
           WS+++ + A  R P C+  S+EK+    ++ +N   L    +++ P      ++K ++PR
Sbjct: 279 WSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPR 338

Query: 318 FKVLEVLKVKKLIKNRKIAW--LLFLGEREFVTNYVLKYLDEVPDLMDIYRGN 365
            +V+ +L  K L+K   I +  +L L   EF+  +VLKY DE+P L+  +  N
Sbjct: 339 NQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]
BLAST of CmaCh04G012890 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 138.7 bits (348), Expect = 7.5e-33
Identity = 96/342 (28.07%), Postives = 171/342 (50.00%), Query Frame = 1 

Query: 23  SSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDE-KSAKKYEAVLGFLKSYGFENSQ 82
           SS    AS+S   F++         P +    +++   KS ++  +V+  LKSY F ++Q
Sbjct: 28  SSNATPASISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQ 87

Query: 83  IAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAKVILLNPSILLRGLDSHLKPSF 142
           I K I   P ++   V   L+PK  F +DIGF G  L K +  N S++   L   L P+ 
Sbjct: 88  IQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTV 147

Query: 143 CFIKEMLE-SDEQANVAIRRSSWLLTSNLKGV-MQSNVNVLLGEGVPSRNISKLIGQQPR 202
             +K ++    E   V + R  WLL S    + +  N++ L   G+    ++ L+ +QPR
Sbjct: 148 EILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPR 207

Query: 203 TIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDTTWKKKINVLKSLGWSEKEI 262
                 +++   V +  +LG    +RM V A+  + S+++ T+ +K+ +  + G+SE EI
Sbjct: 208 IFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEI 267

Query: 263 LTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPKFFMYGLDKWLRPRFKVLEV 322
               +R P  + CSE+K+    +F L    L+ E +   P    Y L+K + PR KVL++
Sbjct: 268 TDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQI 327

Query: 323 LKVKKLI-----KNRKIAWLLFLGEREFVTNYVLKYLDEVPD 357
           L+ K L+     K + +  ++ + E  F+  YV+++ DE+ +
Sbjct: 328 LREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAE 369

[Close]
BLAST of CmaCh04G012890 vs. TAIR10
Match: AT1G62110.1 (AT1G62110.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-26
Identity = 88/305 (28.85%), Postives = 147/305 (48.20%), Query Frame = 1 

Query: 7   KFLLYFIQN--RFVNTVSSSTLPSASVS--------TIEFLKNTCGLAADSPSSAGRKLQ 66
           + L + +QN   F N+ SS++    S          T+ +L ++ GLA     S  +K+ 
Sbjct: 18  RHLRFVVQNGSAFSNSYSSASATDLSSRDGRKVKNFTVSYLVDSLGLATKLAESISKKVS 77

Query: 67  FDEKSAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGP 126
           F  K     + VL   +SYGF NSQI+ +I   P +L      +L  K +FLE  G   P
Sbjct: 78  FVNKGNP--DLVLSLFRSYGFTNSQISSIITDYPRLLLIDAEKSLDIKLQFLESRGASSP 137

Query: 127 LLAKVILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSN 186
            L +++   P IL       L   + F+KE++E+D+ +         L  +N +G    N
Sbjct: 138 ELTQIVSTVPKILGMKEGKSLGRYYDFVKEIIEADKSSKYETLCQP-LPEANRQGNKIRN 197

Query: 187 VNVLLGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLS 246
           V+VL   GVP + +  L+    + +  K +    ++KKV E+G +P T  FV+ALR V  
Sbjct: 198 VSVLRDLGVPQKLLFSLLISDAQPVCGK-ENFEESLKKVVEMGFDPTTSKFVQALRAVYR 257

Query: 247 MNDTTWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVI 302
             D T ++++NV K  G++ +++   FK+ P  L  SE+K+    +       L+ E + 
Sbjct: 258 FTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVIS 317

[Close]
BLAST of CmaCh04G012890 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-26
Identity = 75/266 (28.20%), Postives = 142/266 (53.38%), Query Frame = 1 

Query: 12  FIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEKSAKKYEAVLGF 71
           F    F +T++  + P  S  T+ +L  + GL      +  +K+ F++K     ++VL  
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNP--DSVLNL 92

Query: 72  LKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAKVILLNPSILLR 131
           L+S GF++SQI+++I   P +L +    +L+PK +FL+  G     + +++   P+IL +
Sbjct: 93  LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDK 152

Query: 132 GLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVLLGEGVPSRNIS 191
             +  +   + F+K++++  +   ++            KG    N++VL   GVP + + 
Sbjct: 153 KGEESVSLYYDFVKDIMQDGKSLCISCPEGK-------KGNRIRNISVLRELGVPQKLLF 212

Query: 192 KLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDTTWKKKINVLKS 251
            L+  + + +  K ++   ++KKV ++G +P    FV AL VV  M++ T ++K+NV K 
Sbjct: 213 SLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKR 272

Query: 252 LGWSEKEILTAFKRDPLCLACSEEKM 278
           LG+SE EI   FK+ P  L  SE+K+
Sbjct: 273 LGFSEAEIWAIFKKWPYFLKFSEKKI 288

[Close]
BLAST of CmaCh04G012890 vs. NCBI nr
Match: gi|659090316|ref|XP_008445950.1| (PREDICTED: uncharacterized protein LOC103488825 [Cucumis melo])

HSP 1 Score: 494.6 bits (1272), Expect = 1.5e-136
Identity = 252/374 (67.38%), Postives = 309/374 (82.62%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60
           MSKISS FLL+F  NRF+NT+ +STLP ASVSTI+FL N+CGL++ SP+SAGRKLQF EK
Sbjct: 20  MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 79

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120
           + ++Y AV+ FLKS+GFEN QIAKL+++QPSILQSRV  NLKPKFEFL++IGFVGPLL K
Sbjct: 80  NTQQYGAVIDFLKSHGFENPQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 139

Query: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180
           +I+ +PSIL + LDS LKPSF  +KEML SDE+   AI R+SWLLT + KGV++SN +VL
Sbjct: 140 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 199

Query: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240
           + EGVPSRNI+K+I   PRTIMQ+VD+M+  VK VKELG+EP+  MF +A+ V L M+D+
Sbjct: 200 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 259

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300
           TWKKKINV+KSLGWSEKEILTAFKR PLCL CSEEKMR  ADFC NTAKLDP T+IS P 
Sbjct: 260 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 319

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNRKI--AWLLFLGEREFVTNYVLKYLDEVPDLM 360
           FF   ++K LRPR+KVLEVLKVK L++N+KI  AW    GEREFV N V+K+LDE+P+LM
Sbjct: 320 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 379

Query: 361 DIYRGNAAAESRPV 373
           DIYRGN A+E++ V
Sbjct: 380 DIYRGNDASETQSV 393

[Close]
BLAST of CmaCh04G012890 vs. NCBI nr
Match: gi|778704537|ref|XP_011655553.1| (PREDICTED: uncharacterized protein LOC101217091 [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 4.5e-136
Identity = 251/370 (67.84%), Postives = 306/370 (82.70%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60
           M K SS FLL+FI  R +NT+S+STLP  SVSTI+FL N+CGL++ SP+S GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIHKRSLNTLSTSTLPLPSVSTIQFLTNSCGLSSGSPTSHGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120
           + ++YEA++GF KS+GFENSQIAKL++KQPSILQS+V NNLKPKFEFL++ GFVGPLL K
Sbjct: 61  NIQQYEAIVGFFKSHGFENSQIAKLVSKQPSILQSKVSNNLKPKFEFLQENGFVGPLLPK 120

Query: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180
           VIL +P+ILLR LDS LKPSF F+KEMLE DE+   AI R S LLT N+KG  +S V+VL
Sbjct: 121 VILTSPAILLRSLDSQLKPSFRFMKEMLEPDEKVTTAICRYSRLLTCNIKGNFKSIVDVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240
           + EGVPS+NI+K+I  +P TIM KVDR + AVK VKELG+EP+ RMFV A+ V LSM+D+
Sbjct: 181 VSEGVPSKNIAKMIAYKPTTIMHKVDRTIHAVKTVKELGIEPEARMFVYAVLVRLSMSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300
           TWKKKINV+KSLGWSEKEI TAFK+ PL L CSEEK+R  ADFC NTAKLDP +VI YPK
Sbjct: 241 TWKKKINVMKSLGWSEKEIFTAFKKYPLYLTCSEEKLRDVADFCFNTAKLDPGSVIIYPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNRKIAWLLFLGEREFVTNYVLKYLDEVPDLMDI 360
           FF   +++ L+PR+KVLE LKVK L+K++KIAWLL  GER F+ NYVLKYLDE+P+LMDI
Sbjct: 301 FFKCSVNERLQPRYKVLEALKVKNLLKSKKIAWLLVEGERIFLENYVLKYLDEIPNLMDI 360

Query: 361 YRGNAAAESR 371
           YRGN  AE++
Sbjct: 361 YRGNVVAETK 370

[Close]
BLAST of CmaCh04G012890 vs. NCBI nr
Match: gi|659090428|ref|XP_008446011.1| (PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo])

HSP 1 Score: 493.0 bits (1268), Expect = 4.5e-136
Identity = 248/373 (66.49%), Postives = 303/373 (81.23%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60
           M K SS FLL+FIQ RF+NTVS+STLP ASVST+EFL N+CGL++ SP+S GRKLQFDEK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120
           + ++YEAV+GFLKS+G EN QIAKL++++P ILQS+V  NLKPKFEFL++IGFVGPLL+K
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180
           +IL NP I  R LDS LKPSF F+KE+LESDEQ   AIR S WLL S+ KG+++SN++VL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240
             EGVPSRNI+KLI    RTIM+KVDRM+  VK VKELG+EP+  MFV ALR+  S++D+
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300
           TWKKKINV+KSLGWSE EI TAFK+DP  L CSEEKMR  ADFC NTAKLDP +VI  PK
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNRKIAWLLFLGEREFVTNYVLKYLDEVPDLMDI 360
            F   +DK L+PR+KVLEVLKVK L+KN  IAW+L   ER FV  +V+++LDE+P+LMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YRGNAAAESRPVL 374
           YRGN  AE++ VL
Sbjct: 361 YRGNVTAETKSVL 373

[Close]
BLAST of CmaCh04G012890 vs. NCBI nr
Match: gi|659090283|ref|XP_008445932.1| (PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo])

HSP 1 Score: 491.1 bits (1263), Expect = 1.7e-135
Identity = 250/374 (66.84%), Postives = 305/374 (81.55%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60
           MSKISS FLL+F  NRF+NTVS+STLP  SVSTI+FL N+CGL++ SP+SAGRKLQFDEK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTVSTSTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120
             ++Y AV+ FLKS+GFEN+QIA L++K+PSILQS+V  NLKP+FEF ++IGF+GPLL K
Sbjct: 61  HIQQYGAVIDFLKSHGFENTQIANLVSKRPSILQSKVSTNLKPRFEFFQEIGFIGPLLPK 120

Query: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180
           +IL  P +L   LDS LKPSF F+K++LESDEQ   AI R   LL S+LKG ++SN++VL
Sbjct: 121 LILSTPWVLGSSLDSQLKPSFFFLKDILESDEQVTAAICRFPSLLVSDLKGNLKSNIDVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240
             EGVPSRNI+K+I   PRT+MQKVDRM+  VKKVKELG+EP+TR FV A+R+  S++D+
Sbjct: 181 ASEGVPSRNIAKMIEMDPRTVMQKVDRMIQVVKKVKELGIEPKTRKFVHAIRIRGSLSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300
           TWKKKINV+KSLGWSE EILTAFK+DP  L+CSEEK+R   DFCLNTAKLDPETVISYP 
Sbjct: 241 TWKKKINVMKSLGWSENEILTAFKKDPNYLSCSEEKLRDVTDFCLNTAKLDPETVISYPT 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNR-KIAWLLFLGEREFVTNYVLKYLDEVPDLMD 360
            FM  LDK LRPRFK+LE LKVK L+KN  KI   L  GEREFV  YV+K+LD++P+LMD
Sbjct: 301 LFMSALDKRLRPRFKILEALKVKSLLKNNIKIPRALVRGEREFVERYVVKHLDKIPNLMD 360

Query: 361 IYRGNAAAESRPVL 374
           IYRGN A E++ VL
Sbjct: 361 IYRGNVATETKSVL 374

[Close]
BLAST of CmaCh04G012890 vs. NCBI nr
Match: gi|659090285|ref|XP_008445933.1| (PREDICTED: uncharacterized protein LOC103488812 [Cucumis melo])

HSP 1 Score: 488.4 bits (1256), Expect = 1.1e-134
Identity = 250/373 (67.02%), Postives = 305/373 (81.77%), Query Frame = 1 

Query: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60
           MSK+SS FLL+FIQNRF+NTVS++TLP  SVSTI+FL N+CGL++ SP+SAGRKLQFDEK
Sbjct: 1   MSKLSSSFLLHFIQNRFLNTVSTTTLPLPSVSTIQFLTNSCGLSSGSPTSAGRKLQFDEK 60

Query: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120
             ++Y A++ FLKS GFEN+QIAKL+++ PSILQS+V NNLKPKFEFL++IGFVGPLL K
Sbjct: 61  HIQQYGAIIDFLKSQGFENTQIAKLVSRGPSILQSKVSNNLKPKFEFLQEIGFVGPLLCK 120

Query: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180
           +I+  P IL R LDS LKPSF F+KE+LESDEQ   AI R   LL  +LKG ++ +++VL
Sbjct: 121 LIVSRPRILNRSLDSQLKPSFFFLKEILESDEQVTTAIFRYPSLLICDLKGDLKPHIDVL 180

Query: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240
           + EGVPSRNIS++I  QPR IMQKVDR++ AVK VKELG+EP+ R FV A+ V LSM+D+
Sbjct: 181 VSEGVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDS 240

Query: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300
           TWKKKINV+KSLGWS+KEI TAFKR P  L CSEEK+R  ADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPK 300

Query: 301 FFMYGLDKWLRPRFKVLEVLKVKKLIKNRKIAWLLFLGEREFVTNYVLKYLDEVPDLMDI 360
            F    DK LRPR+KVLEVLKVK L+KN+KIA +L  GER FV  YV+K+LDE+P+LMDI
Sbjct: 301 LFKLSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDI 360

Query: 361 YRGNAAAESRPVL 374
           Y GN  AE++ VL
Sbjct: 361 YVGNVEAETKSVL 373

The following BLAST results are available for this feature:
BLAST of CmaCh04G012890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF9_ARATH3.9e-0722.81Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G... [more]
MTEF4_ARATH1.9e-0622.71Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of CmaCh04G012890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A067L028_JATCU2.3e-9450.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1[more]
M5XTI6_PRUPE8.0e-9248.36Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1[more]
A5CAF4_VITVI5.2e-9148.66Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021879 PE=4 SV=1[more]
F6HV96_VITVI3.4e-9047.73Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00030 PE=4 SV=... [more]
B9GLU5_POPTR3.4e-9048.67Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07200g PE=4 SV=1[more]
BLAST of CmaCh04G012890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.11.8e-5033.63 Mitochondrial transcription termination factor family protein[more]
AT1G21150.14.3e-3627.20 Mitochondrial transcription termination factor family protein[more]
AT5G64950.17.5e-3328.07 Mitochondrial transcription termination factor family protein[more]
AT1G62110.16.8e-2628.85 Mitochondrial transcription termination factor family protein[more]
AT3G46950.16.8e-2628.20 Mitochondrial transcription termination factor family protein[more]
BLAST of CmaCh04G012890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090316|ref|XP_008445950.1|1.5e-13667.38PREDICTED: uncharacterized protein LOC103488825 [Cucumis melo][more]
gi|778704537|ref|XP_011655553.1|4.5e-13667.84PREDICTED: uncharacterized protein LOC101217091 [Cucumis sativus][more]
gi|659090428|ref|XP_008446011.1|4.5e-13666.49PREDICTED: uncharacterized protein LOC103488865 [Cucumis melo][more]
gi|659090283|ref|XP_008445932.1|1.7e-13566.84PREDICTED: uncharacterized protein LOC103488811 [Cucumis melo][more]
gi|659090285|ref|XP_008445933.1|1.1e-13467.02PREDICTED: uncharacterized protein LOC103488812 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G012890.1CmaCh04G012890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 233..342
score: 2.0E-17coord: 69..267
score: 2.3
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 260..291
score: 310.0coord: 292..323
score: 0.54coord: 225..255
score: 0.15coord: 119..150
score: 51.0coord: 155..186
score: 410.0coord: 191..221
score: 1800.0coord: 83..114
score: 1.
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 2..370
score: 5.2E
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 2..370
score: 5.2E