CSPI05G20590 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI05G20590
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionMitochondrial transcription termination factor family protein, putative
LocationChr5 : 21630341 .. 21631598 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTTTTCCGCTTTCCACTATGTGAGGATGTTCGTTTCGTGGAGCTCAAAACCCTAACCAAAACCCTTCCTTCAATCTCTTCATTCTAATCCCAAAATGTCCAAAATTTCCTCCACATTTCTTCTTCATTTCATCCAAAAACGTTTTCTCAACACCATTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCATCCAATTCCTCCAAAATTCATGTGGCCTTTCTTCAGGATCTCCTACCTCTGGCGGTCGAAAGCTCCAATTCGATGAACAAAACATCCAGAAGTACGGAGCCGTTATCGGTTTCTTGAAATCACATGCATTCGAGAATCCACAGATCGCCAACTTGGTCTCGAGGCGACCTTCGCTCCTTCAATCCAAAGTATCCACCAATCTGAAGCCAAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTTCCTAAGCTAATTCTAGCAAACCCTTCAATTCTTCTCTGGAGCTTAGATTCTCATTTGAAACCATCATTTCGTCTCTTAAAGGAAATGGTTGAATCTGATGAACAAGTAACTGCTGCTATTTTTCGTTCTTCGTGGCTTCTAACTTTTAATTTCAAGAGTATTGTAAAACCTAATTTTGATGTTTTGGTCAGGAGTACCTTCTAGGAATATAGCGAAGTTGATCCAAGTGCAGCCTAGAGTTATTACGCAAAAGGTTGATAGATTGATTCAAGTTGTGCAAACGGTTAAAGAATTGGGCATTGAACCAAAGGCTCGTTTGTTTATTCGTGCACTTAGAGTAATGAGTTCTTTGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGAACCAAAATATTTAGGTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGAAACTGTACTTTCTTACCCTGCGTTGTTCATGAGTGCACTGGACAAGCTCCGACCGAGGTACAAAGTTATTGAGGTTCTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATATATAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAAGGGCAATGTGGAAGCAGAAGCTGAAACCAAAAGTGTTGTATAGGATTGGAAAGTTGTAAGTTAACAATCTTCATCATGATCTTCT

mRNA sequence

ATGTTTTGGTCAGGAGTACCTTCTAGGAATATAGCGAAGTTGATCCAAGTGCAGCCTAGAGTTATTACGCAAAAGGTTGATAGATTGATTCAAGTTGTGCAAACGGTTAAAGAATTGGGCATTGAACCAAAGGCTCGTTTGTTTATTCGTGCACTTAGAGTAATGAGTTCTTTGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGAACCAAAATATTTAGGTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGAAACTGTACTTTCTTACCCTGCGTTGTTCATGAGTGCACTGGACAAGCTCCGACCGAGGTACAAAGTTATTGAGGTTCTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATATATAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAAGGGCAATGTGGAAGCAGAAGCTGAAACCAAAAGTGTTGTATAG

Coding sequence (CDS)

ATGTTTTGGTCAGGAGTACCTTCTAGGAATATAGCGAAGTTGATCCAAGTGCAGCCTAGAGTTATTACGCAAAAGGTTGATAGATTGATTCAAGTTGTGCAAACGGTTAAAGAATTGGGCATTGAACCAAAGGCTCGTTTGTTTATTCGTGCACTTAGAGTAATGAGTTCTTTGAGTGATTCAACTTGGAAGAAGAAAATAAATGTTATGAAGAGTTTAGGATGGTCTGAGAAGGAGATTCTTACAGCATTTAAGAAAGAACCAAAATATTTAGGTTGTTCAGAGGAGAAAATGAGGGATGTTGCAGATTTCTGTCTCAACACTGCAAAGTTGGATCCAGAAACTGTACTTTCTTACCCTGCGTTGTTCATGAGTGCACTGGACAAGCTCCGACCGAGGTACAAAGTTATTGAGGTTCTGAAGGTGAAAAATCTTCTTAAGAACAAAAAGATTGCTTGGTTGCTTTTAGAAAGGGAGAGAGAATTTGTGGAGAAATATATAGTTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACAAGGGCAATGTGGAAGCAGAAGCTGAAACCAAAAGTGTTGTATAG
Homology
[Close]
BLAST of CSPI05G20590 vs. TrEMBL
Match: B9SHV1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621880 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 9.5e-44
Identity = 89/173 (51.45%), Postives = 132/173 (76.30%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVP+  I K+I +QPR I QK DR++  V  VK LG+EPK+R+FI A+RV+ S+S+ TWK
Sbjct: 148 GVPAYGIEKMILLQPRAIMQKHDRMVYAVNAVKNLGLEPKSRMFIHAVRVIISMSELTWK 207

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           KK  +MKS+GW+E+EIL+AFK++P  L CSEEK+++  DF LNT KL P  +++YP   M
Sbjct: 208 KKFEMMKSMGWNEEEILSAFKRDPLCLACSEEKIKNAMDFYLNTMKLKPHVIIAYPKFLM 267

Query: 125 SALD-KLRPRYKVIEVLKVKNLLK-NKKIAWLLLEREREFVEKYIVKHLDEIP 176
            A+D +LRPRY V++VL+ K L++ +KKI WLL   E+ F+++Y++K++D++P
Sbjct: 268 YAIDTRLRPRYNVLKVLESKKLIEGDKKIEWLLTINEKTFLQQYVIKYVDKVP 320

[Close]
BLAST of CSPI05G20590 vs. TrEMBL
Match: B9GLU7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07180g PE=4 SV=2)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42
Identity = 90/187 (48.13%), Postives = 135/187 (72.19%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVP   +AKLI + PR +  K +R+++VV +VK LG+EPKA +F+ ALRVM  +S+STWK
Sbjct: 196 GVPHDRVAKLILMYPRTLQMKPERMVRVVNSVKNLGLEPKAPVFVHALRVMIGMSESTWK 255

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           +KI  MKSLGW+E E+L  FK+ P  L CSE+K+    DF +NT +L  +TV++ P L  
Sbjct: 256 RKIEYMKSLGWTEDEVLLTFKRNPDILACSEDKIGRAMDFFVNTVRLGSQTVVANPVLLQ 315

Query: 125 SALDK-LRPRYKVIEVLKVKNLLK-NKKIAWLLLER-EREFVEKYIVKHLDEIPNLMDIY 184
            ++DK +RPRY V++VL+ KNL++ N+++ WLL  R E +F E Y+ ++ D++P L++IY
Sbjct: 316 YSIDKRVRPRYNVLKVLESKNLIEVNQRVFWLLTTRSEMKFRENYVARYADKVPGLLEIY 375

Query: 185 KGNVEAE 189
           +G VEA+
Sbjct: 376 RGTVEAK 382

[Close]
BLAST of CSPI05G20590 vs. TrEMBL
Match: A0A067L028_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-42
Identity = 89/185 (48.11%), Postives = 131/185 (70.81%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVP+ +I K++ +QPRVI+Q  DR++  V  V  LGI+P AR F+ A+RVM S+SD TWK
Sbjct: 195 GVPAHSIEKIVILQPRVISQNHDRMVHAVHAVNNLGIQPTARRFVHAVRVMMSMSDFTWK 254

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           KK  ++K++GWSE+EI +AFKK+P +L  SEEK ++  DF LNT KL P+T+++ P   M
Sbjct: 255 KKFELLKNVGWSEEEIFSAFKKKPHFLASSEEKFKNAMDFYLNTMKLQPQTLIASPIFLM 314

Query: 125 SALDK-LRPRYKVIEVLKVKNLLK-NKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYK 184
            ++DK LRPRY V++ L+ K L++  KKI WLLL  E+ F + ++ K+  E+P L+++Y 
Sbjct: 315 HSVDKRLRPRYNVLQALESKKLIEGRKKIEWLLLISEKNFQKNFVSKYAAEVPGLLEMYL 374

Query: 185 GNVEA 188
           G   A
Sbjct: 375 GTRNA 379

[Close]
BLAST of CSPI05G20590 vs. TrEMBL
Match: M5XTI6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-41
Identity = 88/189 (46.56%), Postives = 130/189 (68.78%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVP   I K+I  QPR + Q VDR+   V+T+K+LGI+P   +F+RA+RVM S+ +STWK
Sbjct: 183 GVPLDVITKMILFQPRTVMQNVDRMAYAVRTIKDLGIDPTGPMFVRAVRVMISMKESTWK 242

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           +KI   KS GWSE  +L+ FK++P  L CSEEK+  V DF LNT KL+PET+++ P L M
Sbjct: 243 RKIEFFKSYGWSEDVVLSVFKRQPFCLACSEEKLGRVMDFFLNTVKLEPETMIANPMLLM 302

Query: 125 SALDK-LRPRYKVIEVLKVKNLLK--NKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIY 184
              +K + PRY V ++L  K L+   NK++ WL+ + ER F++ Y++K+L+E+P+L++IY
Sbjct: 303 HGFEKTVLPRYNVFKILVSKELINRDNKRLCWLITQSERRFLDYYVLKYLNEVPDLLEIY 362

Query: 185 KGNVEAEAE 191
             + E   E
Sbjct: 363 HSSKEETIE 371

[Close]
BLAST of CSPI05G20590 vs. TrEMBL
Match: A0A061FQC6_THECC (Mitochondrial transcription termination factor family protein, putative OS=Theobroma cacao GN=TCM_044645 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.0e-41
Identity = 86/185 (46.49%), Postives = 134/185 (72.43%), Query Frame = 1 

Query: 4   SGVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTW 63
           +G+P+  I+KL+ +QPRVI+Q  DR++  ++TVK++G+EPK   FI ALRV+ S+S+S W
Sbjct: 203 AGIPASRISKLLILQPRVISQSNDRMVYAIKTVKQIGLEPKVPRFIHALRVICSMSESNW 262

Query: 64  KKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALF 123
           KKK+ V  SLGWS++E+L  FKK+P  L CSE K+R + DF +NT K D +T+++Y  L 
Sbjct: 263 KKKVEVFMSLGWSKEEVLNTFKKDPPCLACSENKLRCLMDFYVNTMKSDVKTIIAYSKLL 322

Query: 124 MSALDK-LRPRYKVIEVLKVKNLLKN-KKIAWLLLEREREFVEKYIVKHLDEIPNLMDIY 183
             +++K +  RY V++VL+   L+K  KKI W ++  E++F+E YI KH+D++P L+D+Y
Sbjct: 323 HYSVEKRVHARYIVLKVLESMKLIKEYKKIVWAIVLSEKKFLEAYITKHIDKVPELLDMY 382

Query: 184 KGNVE 187
            G V+
Sbjct: 383 HGAVK 387

[Close]
BLAST of CSPI05G20590 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 94.0 bits (232), Expect = 1.1e-19
Identity = 57/183 (31.15%), Postives = 96/183 (52.46%), Query Frame = 1 

Query: 4   SGVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSD-ST 63
           +GVP + I  L+   P  + QK      + +  +E+G  P+   F+ A+  +S   + S 
Sbjct: 219 TGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSI 278

Query: 64  WKKKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYP-A 123
           W K   V +  GWSE +I+ AFKK P  +  SE K+    ++ +N   + P ++   P  
Sbjct: 279 WDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVV 338

Query: 124 LFMSALDKLRPRYKVIEVLKVKNLLKNK-KIAWLLLEREREFVEKYIVKHLDEIPNLMDI 183
           LF S   ++ PR  V +VL    L+K    +  LL+  E+ F+EK ++K+ +E+P LM++
Sbjct: 339 LFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNL 398

[Close]
BLAST of CSPI05G20590 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 88.2 bits (217), Expect = 6.1e-18
Identity = 49/183 (26.78%), Postives = 99/183 (54.10%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVP ++I  L+Q  P     +  R  +V+  V   G +PK   F+ A+      S+S  +
Sbjct: 207 GVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAME 266

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           +K  + +  GWS+++ + A  + P  +  S+EK+    ++ +N   L    +++ P +  
Sbjct: 267 RKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLS 326

Query: 125 SALDK-LRPRYKVIEVLKVKNLLKNKKIAW--LLLEREREFVEKYIVKHLDEIPNLMDIY 184
            +++K ++PR +VI +L  K L+K + I +  +L  +  EF++K+++K+ DE+P L+  +
Sbjct: 327 LSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]
BLAST of CSPI05G20590 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.0e-17
Identity = 57/185 (30.81%), Postives = 99/185 (53.51%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           G+    +A L++ QPR+     ++L   V    +LG    +R+ + A+  +SSLS+ T+ 
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           +K+ +  + G+SE EI    ++ P  + CSE+K+    +F L    L+ E +   P +  
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 125 SALDK-LRPRYKVIEVLKVKNLL-----KNKKIAWLLLEREREFVEKYIVKHLDEI-PNL 183
             L+K + PR KV+++L+ K LL     K K +  ++   E  F+EKY+V+  DEI   L
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371

[Close]
BLAST of CSPI05G20590 vs. TAIR10
Match: AT1G61960.1 (AT1G61960.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-08
Identity = 38/129 (29.46%), Postives = 67/129 (51.94%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GV  R +  L+    + +  K +R  + ++ V E+G +P+   F+ ALRV+  +SD T +
Sbjct: 201 GVAQRLLFPLLISDGQPVCGK-ERFEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIE 260

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVL---SYPA 124
           +K+NV K LG+   ++   FKK P +L  SE+K+    +   +   L  E +L    +P 
Sbjct: 261 EKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLLLLKKHPK 320

Query: 125 LFMSALDKL 131
              S+  K+
Sbjct: 321 CICSSEQKI 328

[Close]
BLAST of CSPI05G20590 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.4e-08
Identity = 32/94 (34.04%), Postives = 57/94 (60.64%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVP + +  L+  + + +  K ++  + ++ V ++G +P    F+ AL V+  +S+ T +
Sbjct: 196 GVPQKLLFSLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIE 255

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKM 99
           +K+NV K LG+SE EI   FKK P +L  SE+K+
Sbjct: 256 EKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKI 288

[Close]
BLAST of CSPI05G20590 vs. NCBI nr
Match: gi|778704338|ref|XP_011655521.1| (PREDICTED: uncharacterized protein LOC101219984 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 6.9e-80
Identity = 161/192 (83.85%), Postives = 176/192 (91.67%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVPSRN+AKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK
Sbjct: 184 GVPSRNLAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 243

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           KKINVMKSLGWSEKEILTAFK+ P YL CSEEK+RDVADFC NTAKLDP +++SYP LF 
Sbjct: 244 KKINVMKSLGWSEKEILTAFKRFPPYLTCSEEKLRDVADFCSNTAKLDPASLISYPVLFK 303

Query: 125 SALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYKG 184
            ++ K L+PR KVIEVLK+KNLLK K+IA + ++ E+EFVEKYIVKHLDEIPNLMDIYKG
Sbjct: 304 YSVHKRLQPRCKVIEVLKMKNLLKIKRIASVFVKGEKEFVEKYIVKHLDEIPNLMDIYKG 363

Query: 185 NVEAEAETKSVV 196
           NVE EAETKSVV
Sbjct: 364 NVETEAETKSVV 375

[Close]
BLAST of CSPI05G20590 vs. NCBI nr
Match: gi|778704359|ref|XP_011655526.1| (PREDICTED: uncharacterized protein LOC105435553 isoform X2 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 4.7e-76
Identity = 147/192 (76.56%), Postives = 167/192 (86.98%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVPSRNIAKL  +QP  + +KVDR+I  V+ VKE+G EPKAR+F+ A+    SLSDS WK
Sbjct: 184 GVPSRNIAKLFALQPLALMKKVDRMINAVKVVKEIGFEPKARMFVYAVLTRLSLSDSNWK 243

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           KKI+++KSLGWSE EI TAFKK P ++GCSEEKMRDVADFCLNT+KLDP T+++YP  F 
Sbjct: 244 KKIDILKSLGWSENEIFTAFKKYPLFIGCSEEKMRDVADFCLNTSKLDPGTLITYPVFFK 303

Query: 125 SALD-KLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYKG 184
           S++D KLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYKG
Sbjct: 304 SSVDKKLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYKG 363

Query: 185 NVEAEAETKSVV 196
           NVE EAETKSVV
Sbjct: 364 NVETEAETKSVV 375

[Close]
BLAST of CSPI05G20590 vs. NCBI nr
Match: gi|778704280|ref|XP_011655506.1| (PREDICTED: uncharacterized protein LOC101221641 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 6.1e-76
Identity = 155/192 (80.73%), Postives = 169/192 (88.02%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVPSRNIAKLIQVQPR + QKVDR IQVVQTVKELGIEPKARLFI ALRV SSLSDS WK
Sbjct: 184 GVPSRNIAKLIQVQPRAVMQKVDRFIQVVQTVKELGIEPKARLFIHALRVRSSLSDSNWK 243

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           KKINV+KSLG SEKEILTAFKKEPKYL CSEEK+RDVADFC NTAKLDPETV+SYP +FM
Sbjct: 244 KKINVLKSLGLSEKEILTAFKKEPKYLACSEEKIRDVADFCFNTAKLDPETVISYPTIFM 303

Query: 125 SALDKLRPRYKVIEVLKVKNLLKNKKI-AWLLLEREREFVEKYIVKHLDEIPNLMDIYKG 184
           SALDKLR RYKV+E LKVK+LLKN KI    L+  ER+F+E Y+VKHLD+IPNLMDIY+G
Sbjct: 304 SALDKLRQRYKVLEALKVKSLLKNVKILPRALVRAERDFMEMYVVKHLDKIPNLMDIYRG 363

Query: 185 NVEAEAETKSVV 196
           NV   AETKSV+
Sbjct: 364 NV--AAETKSVL 373

[Close]
BLAST of CSPI05G20590 vs. NCBI nr
Match: gi|659092284|ref|XP_008446992.1| (PREDICTED: uncharacterized protein LOC103489536 [Cucumis melo])

HSP 1 Score: 287.7 bits (735), Expect = 1.5e-74
Identity = 147/191 (76.96%), Postives = 168/191 (87.96%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           G+ SR+IAKLI  +PR I QKVDR+IQVV+ VKELGIEPK+ +F+RAL++  S+SDS WK
Sbjct: 144 GIASRSIAKLIVKEPRTIMQKVDRMIQVVKMVKELGIEPKSGMFVRALKIRCSMSDSNWK 203

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           KKINVMKSLGWSEKEI TAFKKEPKYLGCSEEK+RDVADFC NTAKLDPETV+SYP LFM
Sbjct: 204 KKINVMKSLGWSEKEIFTAFKKEPKYLGCSEEKLRDVADFCFNTAKLDPETVISYPTLFM 263

Query: 125 SALDKLRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYKGN 184
           SALDKLRPRYKV+EVLKVK+LLKN KI  +L+  EREFVEKY+VKHL+EIPNLMDIY+GN
Sbjct: 264 SALDKLRPRYKVLEVLKVKSLLKNIKIPRMLVGGEREFVEKYVVKHLNEIPNLMDIYRGN 323

Query: 185 VEAEAETKSVV 196
           V     TKSV+
Sbjct: 324 V--TTGTKSVL 332

[Close]
BLAST of CSPI05G20590 vs. NCBI nr
Match: gi|659090285|ref|XP_008445933.1| (PREDICTED: uncharacterized protein LOC103488812 [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 4.8e-73
Identity = 147/192 (76.56%), Postives = 166/192 (86.46%), Query Frame = 1 

Query: 5   GVPSRNIAKLIQVQPRVITQKVDRLIQVVQTVKELGIEPKARLFIRALRVMSSLSDSTWK 64
           GVPSRNI+++I +QPR I QKVDRLI  V+TVKELGIEPKAR F+ A+ V  S+SDSTWK
Sbjct: 184 GVPSRNISRMISLQPRAIMQKVDRLIPAVKTVKELGIEPKARTFVYAVVVRLSMSDSTWK 243

Query: 65  KKINVMKSLGWSEKEILTAFKKEPKYLGCSEEKMRDVADFCLNTAKLDPETVLSYPALFM 124
           KKINVMKSLGWS+KEI TAFK+ P YLGCSEEK+RDVADFC NTAKLDP T++SYP LF 
Sbjct: 244 KKINVMKSLGWSDKEIFTAFKRHPNYLGCSEEKIRDVADFCFNTAKLDPGTLISYPKLFK 303

Query: 125 SALDK-LRPRYKVIEVLKVKNLLKNKKIAWLLLEREREFVEKYIVKHLDEIPNLMDIYKG 184
            + DK LRPRYKV+EVLKVKNLLKNKKIA +L+E ER FVEKY+VKHLDEIPNLMDIY G
Sbjct: 304 LSFDKRLRPRYKVLEVLKVKNLLKNKKIASVLVEGERRFVEKYVVKHLDEIPNLMDIYVG 363

Query: 185 NVEAEAETKSVV 196
           NV  EAETKSV+
Sbjct: 364 NV--EAETKSVL 373

The following BLAST results are available for this feature:
BLAST of CSPI05G20590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI05G20590 vs. TrEMBL
Match NameE-valueIdentityDescription
B9SHV1_RICCO9.5e-4451.45Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621880 PE=4 SV=1[more]
B9GLU7_POPTR1.4e-4248.13Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07180g PE=4 SV=2[more]
A0A067L028_JATCU3.1e-4248.11Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24592 PE=4 SV=1[more]
M5XTI6_PRUPE1.2e-4146.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021790mg PE=4 SV=1[more]
A0A061FQC6_THECC2.0e-4146.49Mitochondrial transcription termination factor family protein, putative OS=Theob... [more]
BLAST of CSPI05G20590 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07900.11.1e-1931.15 Mitochondrial transcription termination factor family protein[more]
AT1G21150.16.1e-1826.78 Mitochondrial transcription termination factor family protein[more]
AT5G64950.13.0e-1730.81 Mitochondrial transcription termination factor family protein[more]
AT1G61960.12.0e-0829.46 Mitochondrial transcription termination factor family protein[more]
AT3G46950.14.4e-0834.04 Mitochondrial transcription termination factor family protein[more]
BLAST of CSPI05G20590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778704338|ref|XP_011655521.1|6.9e-8083.85PREDICTED: uncharacterized protein LOC101219984 [Cucumis sativus][more]
gi|778704359|ref|XP_011655526.1|4.7e-7676.56PREDICTED: uncharacterized protein LOC105435553 isoform X2 [Cucumis sativus][more]
gi|778704280|ref|XP_011655506.1|6.1e-7680.73PREDICTED: uncharacterized protein LOC101221641 [Cucumis sativus][more]
gi|659092284|ref|XP_008446992.1|1.5e-7476.96PREDICTED: uncharacterized protein LOC103489536 [Cucumis melo][more]
gi|659090285|ref|XP_008445933.1|4.8e-7376.56PREDICTED: uncharacterized protein LOC103488812 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI05G20590.1CSPI05G20590.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 5..162
score: 2.0
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 12..42
score: 0.62coord: 113..143
score: 100.0coord: 46..76
score: 130.0coord: 81..112
score:
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 5..188
score: 2.9
NoneNo IPR availablePANTHERPTHR13068:SF20SUBFAMILY NOT NAMEDcoord: 5..188
score: 2.9