Bhi07G000127 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi07G000127
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	DNA repair protein XRCC2-like protein
Location	chr7 : 7577753 .. 7578258 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTCAGTCAGTGGATCGACGGCGATGAGAGCGCCTCGGAGATGCTTGCCAGAGTTCTCAAAGAACGAACCTCCTTGGTTGTTCCGCCTCTCCACAGAGTTCCTCTCCGCGTTGGCAATGTGGTCGAACTTGTTGGACCTTCTGGTTCTGCCAAAACGCAGATCTTAATCCAGGTCCAATTATCAAGTTCAATCTCTCCATTTGAACTTCTTGCATGATTTATATCCGATATATCGATAAAAAATTGATGGTGATTTACCTCGAAAGCATTTGAGAACAATTTGTGTGCCATTAAAGTTAGACCGCTTTTGTCTTACCAAAAGAAAAGTAGACTGCTTCTGTGAGCAGGCTGCTGTTAATTGCATTCTTCCAAAGGAGTGGAATGGGATCCGCTATGGAGGCTTGGAGTGCTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCACAAGGCTGTACCAAGTTCTGAAGCTTCGAATTTTGGAAGCCATTAGCAACG

mRNA sequence

ATGGCGCTCAGTCAGTGGATCGACGGCGATGAGAGCGCCTCGGAGATGCTTGCCAGAGTTCTCAAAGAACGAACCTCCTTGGTTGTTCCGCCTCTCCACAGAGTTCCTCTCCGCGTTGGCAATGTGGTCGAACTTGTTGGACCTTCTGGTTCTGCCAAAACGCAGATCTTAATCCAGCAGGCTGCTGTTAATTGCATTCTTCCAAAGGAGTGGAATGGGATCCGCTATGGAGGCTTGGAGTGCTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCACAAGGCTGTACCAAGTTCTGAAGCTTCGAATTTTGGAAGCCATTAGCAACG

Coding sequence (CDS)

ATGGCGCTCAGTCAGTGGATCGACGGCGATGAGAGCGCCTCGGAGATGCTTGCCAGAGTTCTCAAAGAACGAACCTCCTTGGTTGTTCCGCCTCTCCACAGAGTTCCTCTCCGCGTTGGCAATGTGGTCGAACTTGTTGGACCTTCTGGTTCTGCCAAAACGCAGATCTTAATCCAGCAGGCTGCTGTTAATTGCATTCTTCCAAAGGAGTGGAATGGGATCCGCTATGGAGGCTTGGAGTGCTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCACAAGGCTGTACCAAGTTCTGAAGCTTCGAATTTTGGAAGCCATTAGCAACG

Protein sequence

MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN

Homology

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BLAST of Bhi07G000127 vs. Swiss-Prot
Match: sp|Q682D3|XRCC2_ARATH (DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC2 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-34
Identity = 70/103 (67.96%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 6   WIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQAAVNC 65
           WI GDE+A +ML+RVLK+R  L++PPLHRVPLR GNVVE+ G S SAKTQILI QAA++C
Sbjct: 9   WIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILI-QAAISC 68

Query: 66  ILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEA 109
           ILPK WNGI YGGL   V+F+DLDCR D+ RL Q+LK R+L+A
Sbjct: 69  ILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQA 110

[Close]

BLAST of Bhi07G000127 vs. Swiss-Prot
Match: sp|O43543|XRCC2_HUMAN (DNA repair protein XRCC2 OS=Homo sapiens OX=9606 GN=XRCC2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 5.9e-07
Identity = 41/103 (39.81%), Postives = 60/103 (58.25%), Query Frame = 0


Query: 11  ESASEMLARVLKERTSL--VVPPL---HRVPLRVGNVVELVGPSGSAKTQILIQQAAVNC 70
           ES +E+LAR L+ R+SL  + P L      P+  G+++E  GP G+ KT++L    A  C
Sbjct: 9   ESGTELLAR-LEGRSSLKEIEPNLFADEDSPVH-GDILEFHGPEGTGKTEMLYHLTA-RC 68

Query: 71  ILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEA 109
           ILPK       GGLE  V+FID D   D+ RL  +L+ R+ ++
Sbjct: 69  ILPKS-----EGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQS 103

[Close]

BLAST of Bhi07G000127 vs. Swiss-Prot
Match: sp|Q9CX47|XRCC2_MOUSE (DNA repair protein XRCC2 OS=Mus musculus OX=10090 GN=Xrcc2 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.9e-06
Identity = 41/103 (39.81%), Postives = 59/103 (57.28%), Query Frame = 0


Query: 11  ESASEMLARVLKERTSL--VVPPL---HRVPLRVGNVVELVGPSGSAKTQILIQQAAVNC 70
           ES +E+LAR L+ R+SL  + P L      P+  G++ E  GP G+ KT++L    A  C
Sbjct: 9   ESGTELLAR-LEGRSSLKELEPNLFADEDSPVH-GDIFEFHGPEGTGKTEMLYHLTA-RC 68

Query: 71  ILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEA 109
           ILPK       GGL+  V+FID D   D+ RL  VL+ R+ ++
Sbjct: 69  ILPKS-----EGGLQIEVLFIDTDYHFDMLRLVTVLEHRLSQS 103

[Close]

BLAST of Bhi07G000127 vs. TAIR10
Match: AT5G64520.1 (homolog of X-ray repair cross complementing 2 (XRCC2))

HSP 1 Score: 144.8 bits (364), Expect = 3.1e-35
Identity = 70/103 (67.96%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 6   WIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQAAVNC 65
           WI GDE+A +ML+RVLK+R  L++PPLHRVPLR GNVVE+ G S SAKTQILI QAA++C
Sbjct: 9   WIRGDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILI-QAAISC 68

Query: 66  ILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEA 109
           ILPK WNGI YGGL   V+F+DLDCR D+ RL Q+LK R+L+A
Sbjct: 69  ILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQA 110

[Close]

BLAST of Bhi07G000127 vs. TrEMBL
Match: tr|A0A1S3C491|A0A1S3C491_CUCME (DNA repair protein XRCC2 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496670 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.6e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           M LSQWIDGDESASEML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVLKLRILEAISN
Sbjct: 61  AAVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISN 110

[Close]

BLAST of Bhi07G000127 vs. TrEMBL
Match: tr|A0A1S3C3R7|A0A1S3C3R7_CUCME (DNA repair protein XRCC2 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496670 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.6e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           M LSQWIDGDESASEML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVLKLRILEAISN
Sbjct: 61  AAVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISN 110

[Close]

BLAST of Bhi07G000127 vs. TrEMBL
Match: tr|A0A1S3C456|A0A1S3C456_CUCME (DNA repair protein XRCC2 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496670 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.6e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           M LSQWIDGDESASEML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVLKLRILEAISN
Sbjct: 61  AAVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISN 110

[Close]

BLAST of Bhi07G000127 vs. TrEMBL
Match: tr|A0A0A0KMH0|A0A0A0KMH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289900 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.3e-47
Identity = 100/111 (90.09%), Postives = 102/111 (91.89%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           MAL QWIDGDESASEML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MALGQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEW+GI YGGL C  VFIDLDCRLDITRL QVLKLRI+EA SN
Sbjct: 61  AAVNCILPKEWSGIHYGGLGCPAVFIDLDCRLDITRLLQVLKLRIVEATSN 110

[Close]

BLAST of Bhi07G000127 vs. TrEMBL
Match: tr|A0A2P6R4M1|A0A2P6R4M1_ROSCH (Putative DNA repair protein XRCC2 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0446351 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.6e-36
Identity = 78/107 (72.90%), Postives = 91/107 (85.05%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           MA  +WIDGDE+A+EML+RV  ER  L++PPLHRVPLRVGNVVEL GPS SAKTQILI Q
Sbjct: 1   MAAKRWIDGDETAAEMLSRVSSERPFLLLPPLHRVPLRVGNVVELAGPSSSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILE 108
           AAVNCILP+EWNG+ YGGLE  V+FIDLDCR DI RL ++LK +I+E
Sbjct: 61  AAVNCILPREWNGVHYGGLERLVMFIDLDCRFDILRLSEMLKHKIME 106

[Close]

BLAST of Bhi07G000127 vs. NCBI nr
Match: XP_008456835.1 (PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 7.0e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           M LSQWIDGDESASEML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVLKLRILEAISN
Sbjct: 61  AAVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISN 110

[Close]

BLAST of Bhi07G000127 vs. NCBI nr
Match: XP_008456836.1 (PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 7.0e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           M LSQWIDGDESASEML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVLKLRILEAISN
Sbjct: 61  AAVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISN 110

[Close]

BLAST of Bhi07G000127 vs. NCBI nr
Match: XP_008456838.1 (PREDICTED: DNA repair protein XRCC2 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 7.0e-49
Identity = 104/111 (93.69%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           M LSQWIDGDESASEML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MELSQWIDGDESASEMLGRVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVLKLRILEAISN
Sbjct: 61  AAVNCILPKEWNGIHYGGLGCSAVFIDLDCRLDITRLLQVLKLRILEAISN 110

[Close]

BLAST of Bhi07G000127 vs. NCBI nr
Match: XP_022998340.1 (DNA repair protein XRCC2 homolog isoform X3 [Cucurbita maxima])

HSP 1 Score: 196.8 bits (499), Expect = 3.8e-47
Identity = 100/111 (90.09%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           MAL QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDI+RL QVLKLRILE   N
Sbjct: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGN 110

[Close]

BLAST of Bhi07G000127 vs. NCBI nr
Match: XP_022998310.1 (DNA repair protein XRCC2 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 196.8 bits (499), Expect = 3.8e-47
Identity = 100/111 (90.09%), Postives = 103/111 (92.79%), Query Frame = 0


Query: 1   MALSQWIDGDESASEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQQ 60
           MAL QWIDGDESA+EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILI Q
Sbjct: 1   MALRQWIDGDESAAEMLTRVLKERTSLLVPPLHRVPLHVGNVVELVGPSGSAKTQILI-Q 60

Query: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLYQVLKLRILEAISN 112
           AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDI+RL QVLKLRILE   N
Sbjct: 61  AAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDISRLSQVLKLRILEGNGN 110

The following BLAST results are available for this feature:

BLAST of Bhi07G000127 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q682D3\|XRCC2_ARATH	5.6e-34	67.96	DNA repair protein XRCC2 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC2 PE=2 S...	[more]
sp\|O43543\|XRCC2_HUMAN	5.9e-07	39.81	DNA repair protein XRCC2 OS=Homo sapiens OX=9606 GN=XRCC2 PE=1 SV=1	[more]
sp\|Q9CX47\|XRCC2_MOUSE	2.9e-06	39.81	DNA repair protein XRCC2 OS=Mus musculus OX=10090 GN=Xrcc2 PE=2 SV=1	[more]

BLAST of Bhi07G000127 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64520.1	3.1e-35	67.96	homolog of X-ray repair cross complementing 2 (XRCC2)	[more]

BLAST of Bhi07G000127 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C491\|A0A1S3C491_CUCME	4.6e-49	93.69	DNA repair protein XRCC2 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A1S3C3R7\|A0A1S3C3R7_CUCME	4.6e-49	93.69	DNA repair protein XRCC2 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A1S3C456\|A0A1S3C456_CUCME	4.6e-49	93.69	DNA repair protein XRCC2 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A0A0KMH0\|A0A0A0KMH0_CUCSA	4.3e-47	90.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G289900 PE=4 SV=1	[more]
tr\|A0A2P6R4M1\|A0A2P6R4M1_ROSCH	7.6e-36	72.90	Putative DNA repair protein XRCC2 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g04...	[more]

BLAST of Bhi07G000127 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456835.1	7.0e-49	93.69	PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cucumis melo]	[more]
XP_008456836.1	7.0e-49	93.69	PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Cucumis melo]	[more]
XP_008456838.1	7.0e-49	93.69	PREDICTED: DNA repair protein XRCC2 homolog isoform X3 [Cucumis melo]	[more]
XP_022998340.1	3.8e-47	90.09	DNA repair protein XRCC2 homolog isoform X3 [Cucurbita maxima]	[more]
XP_022998310.1	3.8e-47	90.09	DNA repair protein XRCC2 homolog isoform X1 [Cucurbita maxima]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008094	DNA-dependent ATPase activity
GO:0005524	ATP binding
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005657	replication fork
GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex

Vocabulary: **Biological Process**
Term	Definition
GO:0000724	double-strand break repair via homologous recombination
GO:0006281	DNA repair

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR020588	RecA_ATP-bd
IPR030547	XRCC2
IPR013632	DNA_recomb/repair_Rad51_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0033063	Rad51B-Rad51C-Rad51D-XRCC2 complex
cellular_component	GO:0005657	replication fork
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008094	DNA-dependent ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi07M000127	Bhi07M000127	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 18..110 e-value: 3.0E-13 score: 51.9
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 2..102
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 38..100 e-value: 6.9E-5 score: 22.1
IPR030547	DNA repair protein XRCC2	PANTHER	PTHR22942:SF44	DNA REPAIR PROTEIN XRCC2	coord: 2..102
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 17..111 score: 11.341
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 37..102

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi07G000127	MELO3C020032	Melon (DHL92) v3.5.1	mewgoB087
Bhi07G000127	ClCG11G001140	Watermelon (Charleston Gray)	wcgwgoB175
Bhi07G000127	Cucsa.373370	Cucumber (Gy14) v1	cgywgoB748
Bhi07G000127	Carg25933	Silver-seed gourd	carwgoB0436
Bhi07G000127	Cla016886	Watermelon (97103) v1	wgowmB566

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi07G000127	Cucurbita maxima (Rimu)	cmawgoB0899
Bhi07G000127	Cucurbita moschata (Rifu)	cmowgoB0898
Bhi07G000127	Cucurbita pepo (Zucchini)	cpewgoB0564
Bhi07G000127	Wild cucumber (PI 183967)	cpiwgoB509
Bhi07G000127	Cucumber (Chinese Long) v3	cucwgoB521
Bhi07G000127	Cucumber (Chinese Long) v3	cucwgoB528
Bhi07G000127	Cucumber (Chinese Long) v2	cuwgoB505
Bhi07G000127	Bottle gourd (USVL1VR-Ls)	lsiwgoB136
Bhi07G000127	Melon (DHL92) v3.6.1	medwgoB076
Bhi07G000127	Watermelon (97103) v2	wgowmbB523
Bhi07G000127	Silver-seed gourd	carwgoB0229
Bhi07G000127	Cucumber (Gy14) v2	cgybwgoB491