Bhi05G001035 (gene) Wax gourd

Overview
NameBhi05G001035
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr5 : 41864113 .. 41865013 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTTCTCAAATATAATTACCGTTGAGTTAGAGGTTAGTCTGCGGAATGGGCATCGTTTTTAAAATTCCATTGAATGTAAATCCTTGTTTTTGAAAACGGATAAAAACGGAAAATTGGGTACTCACAATATTTCCATTGGGCCAACAAAATTAAGCGCAAACCCGTGTGCCGAACACAGACTTGAAACTTCCCCAAATCCAAATCCCATTATAAACCCTAACCCAAAATTCCTCTCTCACACTCATAATTTCTCTCTTCTTCTCTTATTAATCTCACTTTTTATGAAGATTTCGCCTACCTTGGAGATGTGCATGAGCGAGCTCGCCAAGTTCCGAGATCGAGTCGGAACTTCTTCAAGACGGTTCTTGCCGAAGCTCGGAGACGAAGCAACAACAGATCGCCGGGAGAAATCTATTCAAGAGGCTACCAAACAGAACAATAACAGAGGAATCGATGATCCCAAGGAGGTGATTCTTTCGGAATCCATGATTTTCTTGCTAATTGACCGGTTTATTGTTTGGTGATGCTGTTGATGGGAAGGTTTCAGAGTTTTGTAATGTAAATCTGTTTTATGTAAATGTTGTTTTTGTGACGAATTGGTGTTGGATCTTTGCCATGGAAGAGACGACGGTGCAGAAATTGCTCCTATCGCGATGTAGGAGACGACTTATCATTTTGTCTCAAATTAACATTTCATCTTTTTTTTTTTCCTTTTCTTTTCTTTTTTAATTAAGTATTGAAAAATAGGCTAAAGTGTGATGTATCTAAAGTTTAAAATGTTGATATGGATGAAAATTTATTTTTATGAAAATTTTGATGGAAATATCCATAGATATTATGGAAAATTATGAACACAAAATATTTTAAAAAAATTAATTTAAATTAGTAAAGTAATATTTT

mRNA sequence

GTGTTCTCAAATATAATTACCGTTGAGTTAGAGGTTAGTCTGCGGAATGGGCATCGTTTTTAAAATTCCATTGAATGTAAATCCTTGTTTTTGAAAACGGATAAAAACGGAAAATTGGGTACTCACAATATTTCCATTGGGCCAACAAAATTAAGCGCAAACCCGTGTGCCGAACACAGACTTGAAACTTCCCCAAATCCAAATCCCATTATAAACCCTAACCCAAAATTCCTCTCTCACACTCATAATTTCTCTCTTCTTCTCTTATTAATCTCACTTTTTATGAAGATTTCGCCTACCTTGGAGATGTGCATGAGCGAGCTCGCCAAGTTCCGAGATCGAGTCGGAACTTCTTCAAGACGGTTCTTGCCGAAGCTCGGAGACGAAGCAACAACAGATCGCCGGGAGAAATCTATTCAAGAGGCTACCAAACAGAACAATAACAGAGGAATCGATGATCCCAAGGAGGTGATTCTTTCGGAATCCATGATTTTCTTGCTAATTGACCGGTTTATTGTTTGGTGATGCTGTTGATGGGAAGGTTTCAGAGTTTTGTAATGTAAATCTGTTTTATGTAAATGTTGTTTTTGTGACGAATTGGTGTTGGATCTTTGCCATGGAAGAGACGACGGTGCAGAAATTGCTCCTATCGCGATGTAGGAGACGACTTATCATTTTGTCTCAAATTAACATTTCATCTTTTTTTTTTTCCTTTTCTTTTCTTTTTTAATTAAGTATTGAAAAATAGGCTAAAGTGTGATGTATCTAAAGTTTAAAATGTTGATATGGATGAAAATTTATTTTTATGAAAATTTTGATGGAAATATCCATAGATATTATGGAAAATTATGAACACAAAATATTTTAAAAAAATTAATTTAAATTAGTAAAGTAATATTTT

Coding sequence (CDS)

ATGAAGATTTCGCCTACCTTGGAGATGTGCATGAGCGAGCTCGCCAAGTTCCGAGATCGAGTCGGAACTTCTTCAAGACGGTTCTTGCCGAAGCTCGGAGACGAAGCAACAACAGATCGCCGGGAGAAATCTATTCAAGAGGCTACCAAACAGAACAATAACAGAGGAATCGATGATCCCAAGGAGGTGATTCTTTCGGAATCCATGATTTTCTTGCTAATTGACCGGTTTATTGTTTGGTGA

Protein sequence

MKISPTLEMCMSELAKFRDRVGTSSRRFLPKLGDEATTDRREKSIQEATKQNNNRGIDDPKEVILSESMIFLLIDRFIVW
Homology
[Close]
BLAST of Bhi05G001035 vs. TrEMBL
Match: tr|A0A0A0K854|A0A0A0K854_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075565 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.8e-17
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 0 

Query: 1  MKISPTLEMCMSELAKFRD-RVGTSSRRFLPKLGDEATTDRREKSIQEATKQNNNRGIDD 60
          MKISPT+EMCM++LAKFRD  +  SS RFLP +    TTDRR+ SIQ+ TKQN    ID+
Sbjct: 1  MKISPTVEMCMNQLAKFRDVFLSNSSSRFLPTI---TTTDRRQISIQDPTKQNKAIAIDE 60

Query: 61 ---PKEVILSESMIFLLIDRFIVW 81
             PKEVILSES IFLLIDRFIVW
Sbjct: 61 PSSPKEVILSESTIFLLIDRFIVW 81

[Close]
BLAST of Bhi05G001035 vs. NCBI nr
Match: KGN43976.1 (hypothetical protein Csa_7G075565 [Cucumis sativus])

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16
Identity = 56/84 (66.67%), Postives = 64/84 (76.19%), Query Frame = 0 

Query: 1  MKISPTLEMCMSELAKFRD-RVGTSSRRFLPKLGDEATTDRREKSIQEATKQNNNRGIDD 60
          MKISPT+EMCM++LAKFRD  +  SS RFLP +    TTDRR+ SIQ+ TKQN    ID+
Sbjct: 1  MKISPTVEMCMNQLAKFRDVFLSNSSSRFLPTI---TTTDRRQISIQDPTKQNKAIAIDE 60

Query: 61 ---PKEVILSESMIFLLIDRFIVW 81
             PKEVILSES IFLLIDRFIVW
Sbjct: 61 PSSPKEVILSESTIFLLIDRFIVW 81

The following BLAST results are available for this feature:
BLAST of Bhi05G001035 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi05G001035 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi05G001035 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K854|A0A0A0K854_CUCSA9.8e-1766.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075565 PE=4 SV=1[more]
BLAST of Bhi05G001035 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43976.11.5e-1666.67hypothetical protein Csa_7G075565 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001035Bhi05M001035mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..57

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi05G001035ClCG02G005480Watermelon (Charleston Gray)wcgwgoB275
Bhi05G001035CmoCh19G006510Cucurbita moschata (Rifu)cmowgoB0641
Bhi05G001035Cla015973Watermelon (97103) v1wgowmB280
Bhi05G001035Cla97C02G032470Watermelon (97103) v2wgowmbB250
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi05G001035Cucumber (Gy14) v1cgywgoB172
Bhi05G001035Cucumber (Gy14) v1cgywgoB446
Bhi05G001035Cucumber (Gy14) v2cgybwgoB144
Bhi05G001035Cucumber (Gy14) v2cgybwgoB634
Bhi05G001035Cucurbita maxima (Rimu)cmawgoB0118
Bhi05G001035Cucurbita maxima (Rimu)cmawgoB0641
Bhi05G001035Cucurbita maxima (Rimu)cmawgoB0739
Bhi05G001035Cucurbita maxima (Rimu)cmawgoB1050
Bhi05G001035Cucurbita moschata (Rifu)cmowgoB0119
Bhi05G001035Cucurbita moschata (Rifu)cmowgoB0731
Bhi05G001035Cucurbita moschata (Rifu)cmowgoB1043
Bhi05G001035Cucurbita pepo (Zucchini)cpewgoB0316
Bhi05G001035Cucurbita pepo (Zucchini)cpewgoB0855
Bhi05G001035Cucurbita pepo (Zucchini)cpewgoB0932
Bhi05G001035Wild cucumber (PI 183967)cpiwgoB146
Bhi05G001035Wild cucumber (PI 183967)cpiwgoB674
Bhi05G001035Cucumber (Chinese Long) v3cucwgoB154
Bhi05G001035Cucumber (Chinese Long) v3cucwgoB588
Bhi05G001035Cucumber (Chinese Long) v3cucwgoB688
Bhi05G001035Cucumber (Chinese Long) v2cuwgoB147
Bhi05G001035Cucumber (Chinese Long) v2cuwgoB663
Bhi05G001035Bottle gourd (USVL1VR-Ls)lsiwgoB062
Bhi05G001035Bottle gourd (USVL1VR-Ls)lsiwgoB115
Bhi05G001035Melon (DHL92) v3.6.1medwgoB222
Bhi05G001035Melon (DHL92) v3.6.1medwgoB629
Bhi05G001035Melon (DHL92) v3.5.1mewgoB222
Bhi05G001035Watermelon (Charleston Gray)wcgwgoB041
Bhi05G001035Watermelon (97103) v2wgowmbB270
Bhi05G001035Watermelon (97103) v1wgowmB250
Bhi05G001035Silver-seed gourdcarwgoB0260
Bhi05G001035Silver-seed gourdcarwgoB1036