Bhi04G001661 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi04G001661
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	transcription factor IBH1
Location	chr4 : 56039347 .. 56041167 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCACGCTCTATCTTCTCTCTCAATATGATCAATGTATAAATAAATTAATAAAAGTGATTAATAATAATAAAAATTATTAAAAAAAAAAAATACCCATTTGATTCCAAAAGCCTAAAATTCCCCATAGCCATCCAATTTCCATCCCTTATTCCTCCTCCTATTGCTTGATTCCTTCCCCTATTTGCTTCTTCCTCTCTCTCTCTCTCTCTCTCTTGAATTATTTGCAGTTTAGAGAGAGAAAGTCTGTGTTTTTAAGCTTTGTTGTGTTTTTATGATCAAAATCAGCTTATTATACTTTGTGCTTCAACTCAAGTTTTTGCCTTTTGTCCTTCCAAGCAAGAGGCCCCTCTGTGTCAGACCCTCAAACAAAAAAAAAAAGAAAAGAAAAATCTCAACTTCCAAACCTTCATTCTTCCATTTGTCTCTCTCTCTCTCTTCCAAAAGATTTGTTGTGTCAGAGTTAGTTGTACTAGGAATTCAAAATCTCTCTCTCTCTCTCCCAACATTATATATCTTCCCTCTTCATATTTTCCTCTTCTCTCCTCTCCAATGGCTAAAACCCTAATGAGTTCCACCTCATCCCGGCTCCGTTTTGCTCGAACCTTCCTCCGATCGTTCTCGAGAATCAAATCCCGAAGATCCGCCTCTCCGTCGGCTCTAGAGCTCAAACGCCAGAGTCGACGGATCAAAATCGCTGCGTACTCCTCCATGGCTCGCATCGCAGGGCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTCTAGGCTCCAGACGCGTGCCAGACACAAGACTCTAATGAGACGATGCTCGATGACGATGCGTTCGGATGATCAGGTTGGGAAGCTCCGTCGCCTTCTCCCTGGCGGCAACACGATGGACGTGTGCACGTTGCTCGAGGAAACTGCCAATTACATCCATTGCTTGTCCTCGCAGGTTAAGGTGATGAAAGCCATATCTGATCATCACTTCTCAACCAATTGATCCACACTTCATCATCTTCTTCTTCAAATCCCTATGAACAGAGATCATATCCAAACACAAAGCATAAATTATACACAAGAACAGAATAGCAAAAGTAGAAAAAGAGAGAGATTTCATATGATAATATATGTTGCTTTGATAGCCCTTTCATGCATATAAAAAACAAGTTATACAGAGATTTTAGAACAATAGTAATATATATAATATTTGTGCATGCATTGGGGTGGTAATTCTTGCAAAAATCCATTGTTTTTATACTCTGATTTTCTTCTTCTTTTTTTTTTTTAACCATCTTTTTTATGATAGAGATAAATTTAAAGTACCCTTTTGCTCTCTCTCTCTATTTTTGTCTCTCATGATATTGTCTGTAAGCTTTGGAAATCTCAGCAGAAGAAGCAAAATTTTGAGTTTTTTTTGTATGAATTTCTTATGTTTTGTTTTGTTTTGTGTTGGTTTTTTGGGAAAGTGCCAAGTTTGTTTGATTATGAGATTATAAGATTCTCTCTTATTTTAAGAGGTTTTCAACTTTACATTTTATATAGTATATATGTATATGAATCCATTCAATCTTGAAGAATTGGTCTCTATATCTTTAAAAAAACATGGTTAATTCATTGTAGGTTGATCTTGATCCCCTCTCTTATGTTAAAAACATGTTTGGATAACGGTTTTTTTTTTTGGTTTAACACATTTCGGAGAGAACCAGCTAGAGCTTATACTTATCCTGTGTCTAATCTTTAGGCAACGTTGAATAAATATTTTTAGGCCTCATTTATTTCACAAATTTCAAACAAACATTAATATCCCTGATAATCTAGGGAATTTTAAAACTCATTATCTG

mRNA sequence

CTCCACGCTCTATCTTCTCTCTCAATATGATCAATGTATAAATAAATTAATAAAAGTGATTAATAATAATAAAAATTATTAAAAAAAAAAAATACCCATTTGATTCCAAAAGCCTAAAATTCCCCATAGCCATCCAATTTCCATCCCTTATTCCTCCTCCTATTGCTTGATTCCTTCCCCTATTTGCTTCTTCCTCTCTCTCTCTCTCTCTCTCTTGAATTATTTGCAGTTTAGAGAGAGAAAGTCTGTGTTTTTAAGCTTTGTTGTGTTTTTATGATCAAAATCAGCTTATTATACTTTGTGCTTCAACTCAAGTTTTTGCCTTTTGTCCTTCCAAGCAAGAGGCCCCTCTGTGTCAGACCCTCAAACAAAAAAAAAAAGAAAAGAAAAATCTCAACTTCCAAACCTTCATTCTTCCATTTGTCTCTCTCTCTCTCTTCCAAAAGATTTGTTGTGTCAGAGTTAGTTGTACTAGGAATTCAAAATCTCTCTCTCTCTCTCCCAACATTATATATCTTCCCTCTTCATATTTTCCTCTTCTCTCCTCTCCAATGGCTAAAACCCTAATGAGTTCCACCTCATCCCGGCTCCGTTTTGCTCGAACCTTCCTCCGATCGTTCTCGAGAATCAAATCCCGAAGATCCGCCTCTCCGTCGGCTCTAGAGCTCAAACGCCAGAGTCGACGGATCAAAATCGCTGCGTACTCCTCCATGGCTCGCATCGCAGGGCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTCTAGGCTCCAGACGCGTGCCAGACACAAGACTCTAATGAGACGATGCTCGATGACGATGCGTTCGGATGATCAGGTTGGGAAGCTCCGTCGCCTTCTCCCTGGCGGCAACACGATGGACGTGTGCACGTTGCTCGAGGAAACTGCCAATTACATCCATTGCTTGTCCTCGCAGGTTAAGGTGATGAAAGCCATATCTGATCATCACTTCTCAACCAATTGATCCACACTTCATCATCTTCTTCTTCAAATCCCTATGAACAGAGATCATATCCAAACACAAAGCATAAATTATACACAAGAACAGAATAGCAAAAGTAGAAAAAGAGAGAGATTTCATATGATAATATATGTTGCTTTGATAGCCCTTTCATGCATATAAAAAACAAGTTATACAGAGATTTTAGAACAATAGTAATATATATAATATTTGTGCATGCATTGGGGTGGTAATTCTTGCAAAAATCCATTGTTTTTATACTCTGATTTTCTTCTTCTTTTTTTTTTTTAACCATCTTTTTTATGATAGAGATAAATTTAAAGTACCCTTTTGCTCTCTCTCTCTATTTTTGTCTCTCATGATATTGTCTGTAAGCTTTGGAAATCTCAGCAGAAGAAGCAAAATTTTGAGTTTTTTTTGTATGAATTTCTTATGTTTTGTTTTGTTTTGTGTTGGTTTTTTGGGAAAGTGCCAAGTTTGTTTGATTATGAGATTATAAGATTCTCTCTTATTTTAAGAGGTTTTCAACTTTACATTTTATATAGTATATATGTATATGAATCCATTCAATCTTGAAGAATTGGTCTCTATATCTTTAAAAAAACATGGTTAATTCATTGTAGGTTGATCTTGATCCCCTCTCTTATGTTAAAAACATGTTTGGATAACGGTTTTTTTTTTTGGTTTAACACATTTCGGAGAGAACCAGCTAGAGCTTATACTTATCCTGTGTCTAATCTTTAGGCAACGTTGAATAAATATTTTTAGGCCTCATTTATTTCACAAATTTCAAACAAACATTAATATCCCTGATAATCTAGGGAATTTTAAAACTCATTATCTG

Coding sequence (CDS)

ATGGCTAAAACCCTAATGAGTTCCACCTCATCCCGGCTCCGTTTTGCTCGAACCTTCCTCCGATCGTTCTCGAGAATCAAATCCCGAAGATCCGCCTCTCCGTCGGCTCTAGAGCTCAAACGCCAGAGTCGACGGATCAAAATCGCTGCGTACTCCTCCATGGCTCGCATCGCAGGGCCAAGGAGAGCTTGGGCTAGAGCCCTGCTCTCTAGGCTCCAGACGCGTGCCAGACACAAGACTCTAATGAGACGATGCTCGATGACGATGCGTTCGGATGATCAGGTTGGGAAGCTCCGTCGCCTTCTCCCTGGCGGCAACACGATGGACGTGTGCACGTTGCTCGAGGAAACTGCCAATTACATCCATTGCTTGTCCTCGCAGGTTAAGGTGATGAAAGCCATATCTGATCATCACTTCTCAACCAATTGA

Protein sequence

MAKTLMSSTSSRLRFARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPRRAWARALLSRLQTRARHKTLMRRCSMTMRSDDQVGKLRRLLPGGNTMDVCTLLEETANYIHCLSSQVKVMKAISDHHFSTN

Homology

[Close]

BLAST of Bhi04G001661 vs. Swiss-Prot
Match: sp|Q9SKX1|IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.6e-10
Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 0


Query: 15  FARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIA-GPRRAWARALLSRLQ 74
           FA  FL+S S ++ +++   +  +   + R+IK AAY SMAR A G  R W+RALL R  
Sbjct: 18  FAFHFLQSLSNLR-KQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRAD 77

Query: 75  ---------TRARHKTLMRRCSMTMRS---DDQVGKLRRLLPGGNTMDVCTLLEETANYI 134
                    +R + K   +R     R+   ++   +LR L+PGG  M+   L+EETA+YI
Sbjct: 78  KDDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYI 137

Query: 135 HCLSSQVKVMKAISD 137
            CLS QVKVM+ + D
Sbjct: 138 KCLSMQVKVMQCLVD 151

[Close]

BLAST of Bhi04G001661 vs. Swiss-Prot
Match: sp|Q7XR02|IBH1_ORYSJ (Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 6.8e-08
Identity = 52/158 (32.91%), Postives = 72/158 (45.57%), Query Frame = 0


Query: 19  FLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPRRAWARALLSRLQTRARH 78
           FLR+ SRI         A  + R++R I+ AAYSSMAR A PRRAW+RALL +++ R R 
Sbjct: 48  FLRALSRIH-------RATPVTRRTRTIRRAAYSSMARAASPRRAWSRALLGQVRAR-RS 107

Query: 79  KTL----------------------------------------MRRCSMTMRSDDQVGKL 137
           +TL                                                        L
Sbjct: 108 RTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAL 167

[Close]

BLAST of Bhi04G001661 vs. Swiss-Prot
Match: sp|Q01I07|IBH1_ORYSI (Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-07
Identity = 52/159 (32.70%), Postives = 69/159 (43.40%), Query Frame = 0


Query: 19  FLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPRRAWARALLSRLQTRARH 78
           FLR+ SRI         A  + R++R I+ AAYSSMAR A PRRAW+RALL   Q RAR 
Sbjct: 48  FLRALSRIH-------RATPVTRRTRTIRRAAYSSMARAASPRRAWSRALLG--QARARR 107

Query: 79  K-----------------------------------------TLMRRCSMTMRSDDQVGK 137
                                                                   +   
Sbjct: 108 SRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADA 167

[Close]

BLAST of Bhi04G001661 vs. TAIR10
Match: AT2G43060.1 (ILI1 binding bHLH 1)

HSP 1 Score: 65.5 bits (158), Expect = 3.1e-11
Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 0


Query: 15  FARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIA-GPRRAWARALLSRLQ 74
           FA  FL+S S ++ +++   +  +   + R+IK AAY SMAR A G  R W+RALL R  
Sbjct: 18  FAFHFLQSLSNLR-KQNPFDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRAD 77

Query: 75  ---------TRARHKTLMRRCSMTMRS---DDQVGKLRRLLPGGNTMDVCTLLEETANYI 134
                    +R + K   +R     R+   ++   +LR L+PGG  M+   L+EETA+YI
Sbjct: 78  KDDNKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYI 137

Query: 135 HCLSSQVKVMKAISD 137
            CLS QVKVM+ + D
Sbjct: 138 KCLSMQVKVMQCLVD 151

[Close]

BLAST of Bhi04G001661 vs. TAIR10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 41.6 bits (96), Expect = 4.8e-04
Identity = 19/53 (35.85%), Postives = 32/53 (60.38%), Query Frame = 0


Query: 90  RSDDQVGKLRRLLPGGNTMDVCTLLEETANYIHCLSSQVKVMKAISDHHFSTN 143
           R  +++  L+ L+PGG  MD  ++L+E ANY+  L +QVK ++ +      TN
Sbjct: 290 RISEKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTN 342

[Close]

BLAST of Bhi04G001661 vs. TAIR10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators)

HSP 1 Score: 41.6 bits (96), Expect = 4.8e-04
Identity = 18/43 (41.86%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 92  DDQVGKLRRLLPGGNTMDVCTLLEETANYIHCLSSQVKVMKAI 135
           ++++ +L++LLPGG  M+V  +L E  NYI CL  Q   +K+I
Sbjct: 111 EERLRELKKLLPGGEEMNVEEMLSEIGNYIKCLELQTIALKSI 153

[Close]

BLAST of Bhi04G001661 vs. TrEMBL
Match: tr|A0A1S3CLD3|A0A1S3CLD3_CUCME (transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.4e-45
Identity = 110/144 (76.39%), Postives = 123/144 (85.42%), Query Frame = 0


Query: 2   AKTLMSSTSSRLRFARTFLRSFSRIKSRRSASPSAL---ELKRQSRRIKIAAYSSMARIA 61
           A TL++STSSR RFARTFLR FSRIKS+RSA+ ++    +LKRQS+RIK+ AYSSMAR+A
Sbjct: 7   AITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMARVA 66

Query: 62  GPRRAWARALLSRLQTRARHKTLMRRCSMTMRS-DDQVGKLRRLLPGGNTMDVCTLLEET 121
           GPRRAWARALL +LQTR RH+TLMRR      S DDQVGKLRRLLPGG TMDVCTLLEET
Sbjct: 67  GPRRAWARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEET 126

Query: 122 ANYIHCLSSQVKVMKAISDHHFST 142
           ANYIHCLS+QVKVMKAISD H ST
Sbjct: 127 ANYIHCLSTQVKVMKAISDQHLST 150

[Close]

BLAST of Bhi04G001661 vs. TrEMBL
Match: tr|A0A0A0KDQ3|A0A0A0KDQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-38
Identity = 101/140 (72.14%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 2   AKTLMSSTSSRLRFARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPR 61
           A TL++STSSRL FART         S   AS    +LKRQSRRIK+AAYSSMAR+AG R
Sbjct: 7   AITLLNSTSSRLCFART---------SATFASAPPDQLKRQSRRIKMAAYSSMARVAGRR 66

Query: 62  RAWARALLSRLQTRARHKTLMRRCSM-TMRSDDQVGKLRRLLPGGNTMDVCTLLEETANY 121
           RAWARALL RL TR RHKTLMRR    +  SDD VGKLRRLLPGG TMDVCTLLEETANY
Sbjct: 67  RAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANY 126

Query: 122 IHCLSSQVKVMKAISDHHFS 141
           IHCLS+QVKVMKAIS+HH S
Sbjct: 127 IHCLSTQVKVMKAISNHHLS 137

[Close]

BLAST of Bhi04G001661 vs. TrEMBL
Match: tr|A0A2P4IZA5|A0A2P4IZA5_QUESU (Transcription factor ibh1 OS=Quercus suber OX=58331 GN=CFP56_26828 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.9e-27
Identity = 71/140 (50.71%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 6   MSSTSSRLRFARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPRRAWA 65
           +++ S +++FAR F+R+  R++    +S S  E++++S+RIKIAAYSSMA   G RRAW+
Sbjct: 8   LNTNSHKIKFARRFIRTLLRMRKNAPSSSSIEEIRKRSQRIKIAAYSSMAHAVGSRRAWS 67

Query: 66  RALLSRLQTRARHKTLMRRCSMTMR--------SDDQVGKLRRLLPGGNTMDVCTLLEET 125
           RA+L +L+ RARH  +MRR SM  R           Q  KLR+L+PGG  MD+C+LLEET
Sbjct: 68  RAILFKLRNRARHHGMMRRRSMKKRVIKNDPPGDQSQTNKLRQLVPGGKAMDMCSLLEET 127

Query: 126 ANYIHCLSSQVKVMKAISDH 138
           A+YI CLS+QVKVM+ I+DH
Sbjct: 128 AHYIRCLSTQVKVMQTIADH 147

[Close]

BLAST of Bhi04G001661 vs. TrEMBL
Match: tr|A0A2N9I4P0|A0A2N9I4P0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24
Identity = 69/144 (47.92%), Postives = 103/144 (71.53%), Query Frame = 0


Query: 6   MSSTSSRLRFARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPRRAWA 65
           +++ S R++FAR F+R+ S++K    +S S  E++++S+RIKIAAYSSMA   G ++AW+
Sbjct: 8   LNTNSRRIKFARRFIRTLSKMKKTAPSSSSIDEVRKRSQRIKIAAYSSMAHAVGSKKAWS 67

Query: 66  RALLSRLQTRARHK-TLMRRCSMTMR-----------SDDQVGKLRRLLPGGNTMDVCTL 125
           RA+L +L+ RARH+  +MRR S+  +             +Q  KLR+L+PGG  MD+C+L
Sbjct: 68  RAILFKLRNRARHQGMMMRRRSIGFKKKRAIKNDPPGEQNQTKKLRQLVPGGKAMDMCSL 127

Query: 126 LEETANYIHCLSSQVKVMKAISDH 138
           LEETA+YI CLS+QVKVM+ I+DH
Sbjct: 128 LEETAHYIRCLSTQVKVMQTIADH 151

[Close]

BLAST of Bhi04G001661 vs. TrEMBL
Match: tr|A5AK99|A5AK99_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033284 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.9e-24
Identity = 71/139 (51.08%), Postives = 97/139 (69.78%), Query Frame = 0


Query: 3   KTLMSSTSSRLRFARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPRR 62
           +    ++S ++R AR FL+S  RI+ RR  S S+ E++++SRRIK+AAYSSMA   G RR
Sbjct: 5   RVFFXTSSRKVRCARRFLQSLLRIRQRRPGSLSSEEVRQRSRRIKMAAYSSMACTVGSRR 64

Query: 63  AWARALLSRLQTRA-RHKTLMRRC----SMTMRSDDQVGKLRRLLPGGNTMDVCTLLEET 122
           AW+RA++ RLQ+RA RH  + RRC        R   Q  +LR L+PGG  +D C LLEET
Sbjct: 65  AWSRAIIFRLQSRAGRHGRMRRRCLGVKKKPSREMSQADRLRDLVPGGEALDFCNLLEET 124

Query: 123 ANYIHCLSSQVKVMKAISD 137
           A+YI CLSSQV++MK+I+D
Sbjct: 125 AHYIKCLSSQVEIMKSIAD 143

[Close]

BLAST of Bhi04G001661 vs. NCBI nr
Match: XP_008464343.1 (PREDICTED: transcription factor IBH1 [Cucumis melo])

HSP 1 Score: 191.4 bits (485), Expect = 2.1e-45
Identity = 110/144 (76.39%), Postives = 123/144 (85.42%), Query Frame = 0


Query: 2   AKTLMSSTSSRLRFARTFLRSFSRIKSRRSASPSAL---ELKRQSRRIKIAAYSSMARIA 61
           A TL++STSSR RFARTFLR FSRIKS+RSA+ ++    +LKRQS+RIK+ AYSSMAR+A
Sbjct: 7   AITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMARVA 66

Query: 62  GPRRAWARALLSRLQTRARHKTLMRRCSMTMRS-DDQVGKLRRLLPGGNTMDVCTLLEET 121
           GPRRAWARALL +LQTR RH+TLMRR      S DDQVGKLRRLLPGG TMDVCTLLEET
Sbjct: 67  GPRRAWARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEET 126

Query: 122 ANYIHCLSSQVKVMKAISDHHFST 142
           ANYIHCLS+QVKVMKAISD H ST
Sbjct: 127 ANYIHCLSTQVKVMKAISDQHLST 150

[Close]

BLAST of Bhi04G001661 vs. NCBI nr
Match: XP_011658387.1 (PREDICTED: transcription factor IBH1 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 2.3e-44
Identity = 110/143 (76.92%), Postives = 122/143 (85.31%), Query Frame = 0


Query: 2   AKTLMSSTSSRLRFARTFLRSFSRIKSRRSASPSAL---ELKRQSRRIKIAAYSSMARIA 61
           A TL++STSSRL FARTFLR FSRIKS+RSA+ ++    +LKRQSRRIK+AAYSSMAR+A
Sbjct: 7   AITLLNSTSSRLCFARTFLRLFSRIKSQRSATFASAPPDQLKRQSRRIKMAAYSSMARVA 66

Query: 62  GPRRAWARALLSRLQTRARHKTLMRRCSM-TMRSDDQVGKLRRLLPGGNTMDVCTLLEET 121
           G RRAWARALL RL TR RHKTLMRR    +  SDD VGKLRRLLPGG TMDVCTLLEET
Sbjct: 67  GRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEET 126

Query: 122 ANYIHCLSSQVKVMKAISDHHFS 141
           ANYIHCLS+QVKVMKAIS+HH S
Sbjct: 127 ANYIHCLSTQVKVMKAISNHHLS 149

[Close]

BLAST of Bhi04G001661 vs. NCBI nr
Match: XP_023005092.1 (transcription factor IBH1 [Cucurbita maxima])

HSP 1 Score: 178.7 bits (452), Expect = 1.4e-41
Identity = 106/145 (73.10%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 4   TLMSSTSSRLRFARTFLRSFSRIKSRR---SASPSALELKRQSRRIKIAAYSSMARIAGP 63
           T M+S+SS LR ARTFLRSFSRIKSRR   +AS SA EL+R+SRRIKIAAYSSMAR+AGP
Sbjct: 8   TPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSSMARVAGP 67

Query: 64  RRAWARALLSRLQTRARHKTLMRRCSMTMRS---DDQVGKLRRLLPGGNTMDVCTLLEET 123
           +R WARALL +L TRARH+T MRR   TM S   DD VGKLRRL+PGG+ MDVCTLLEET
Sbjct: 68  QRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDDHVGKLRRLVPGGDGMDVCTLLEET 127

Query: 124 ANYIHCLSSQVKVMKAISDHHFSTN 143
           A+YIHCLS+QVKVM AI+ HH S N
Sbjct: 128 ADYIHCLSAQVKVMNAIA-HHLSKN 151

[Close]

BLAST of Bhi04G001661 vs. NCBI nr
Match: KGN45911.1 (hypothetical protein Csa_6G020740 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38
Identity = 101/140 (72.14%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 2   AKTLMSSTSSRLRFARTFLRSFSRIKSRRSASPSALELKRQSRRIKIAAYSSMARIAGPR 61
           A TL++STSSRL FART         S   AS    +LKRQSRRIK+AAYSSMAR+AG R
Sbjct: 7   AITLLNSTSSRLCFART---------SATFASAPPDQLKRQSRRIKMAAYSSMARVAGRR 66

Query: 62  RAWARALLSRLQTRARHKTLMRRCSM-TMRSDDQVGKLRRLLPGGNTMDVCTLLEETANY 121
           RAWARALL RL TR RHKTLMRR    +  SDD VGKLRRLLPGG TMDVCTLLEETANY
Sbjct: 67  RAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEETANY 126

Query: 122 IHCLSSQVKVMKAISDHHFS 141
           IHCLS+QVKVMKAIS+HH S
Sbjct: 127 IHCLSTQVKVMKAISNHHLS 137

[Close]

BLAST of Bhi04G001661 vs. NCBI nr
Match: XP_023548405.1 (transcription factor IBH1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 95/141 (67.38%), Postives = 109/141 (77.30%), Query Frame = 0


Query: 3   KTLMSSTSSRLRFARTFLRSFSRIKSRRSA-SPSALELKRQSRRIKIAAYSSMARIAGPR 62
           +T + STS+ LR ARTFLRSF+ IKS+  A  PS  ELKRQSRRIK+ AYSSMAR AGPR
Sbjct: 7   RTPIRSTSTALRLARTFLRSFANIKSQEPAILPSPPELKRQSRRIKMVAYSSMARAAGPR 66

Query: 63  RAWARALLSRLQTRARHKTLMRRCSMTMRSDDQVGKLRRLLPGGNTMDVCTLLEETANYI 122
            AWARALL +L+ RARH+TL+ R       DD+VGKLRRL+PGG  MDVC+LLEET  YI
Sbjct: 67  CAWARALLFKLRMRARHRTLITRXXXXXXXDDRVGKLRRLVPGGERMDVCSLLEETGEYI 126

Query: 123 HCLSSQVKVMKAISDHHFSTN 143
            CL +QVKVMKAI DH FSTN
Sbjct: 127 QCLRTQVKVMKAICDHQFSTN 147

The following BLAST results are available for this feature:

BLAST of Bhi04G001661 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKX1\|IBH1_ARATH	5.6e-10	38.52	Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1	[more]
sp\|Q7XR02\|IBH1_ORYSJ	6.8e-08	32.91	Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 ...	[more]
sp\|Q01I07\|IBH1_ORYSI	2.0e-07	32.70	Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV...	[more]

BLAST of Bhi04G001661 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43060.1	3.1e-11	38.52	ILI1 binding bHLH 1	[more]
AT3G21330.1	4.8e-04	35.85	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G30180.1	4.8e-04	41.86	sequence-specific DNA binding transcription factors;transcription regulators	[more]

BLAST of Bhi04G001661 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CLD3\|A0A1S3CLD3_CUCME	1.4e-45	76.39	transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1	[more]
tr\|A0A0A0KDQ3\|A0A0A0KDQ3_CUCSA	2.7e-38	72.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1	[more]
tr\|A0A2P4IZA5\|A0A2P4IZA5_QUESU	4.9e-27	50.71	Transcription factor ibh1 OS=Quercus suber OX=58331 GN=CFP56_26828 PE=4 SV=1	[more]
tr\|A0A2N9I4P0\|A0A2N9I4P0_FAGSY	1.0e-24	47.92	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1	[more]
tr\|A5AK99\|A5AK99_VITVI	3.9e-24	51.08	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_033284 PE=4 SV=1	[more]

BLAST of Bhi04G001661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464343.1	2.1e-45	76.39	PREDICTED: transcription factor IBH1 [Cucumis melo]	[more]
XP_011658387.1	2.3e-44	76.92	PREDICTED: transcription factor IBH1 [Cucumis sativus]	[more]
XP_023005092.1	1.4e-41	73.10	transcription factor IBH1 [Cucurbita maxima]	[more]
KGN45911.1	4.2e-38	72.14	hypothetical protein Csa_6G020740 [Cucumis sativus]	[more]
XP_023548405.1	1.2e-37	67.38	transcription factor IBH1 [Cucurbita pepo subsp. pepo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001661	Bhi04M001661	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 11..136
None	No IPR available	PANTHER	PTHR33124:SF31	TRANSCRIPTION FACTOR IBH1	coord: 11..136

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi04G001661	ClCG08G003780	Watermelon (Charleston Gray)	wcgwgoB636
Bhi04G001661	Cucsa.365680	Cucumber (Gy14) v1	cgywgoB737
Bhi04G001661	CmaCh08G000980	Cucurbita maxima (Rimu)	cmawgoB1117
Bhi04G001661	CmaCh17G005710	Cucurbita maxima (Rimu)	cmawgoB0483
Bhi04G001661	CmoCh08G001020	Cucurbita moschata (Rifu)	cmowgoB1116
Bhi04G001661	Lsi08G003170	Bottle gourd (USVL1VR-Ls)	lsiwgoB599
Bhi04G001661	Cp4.1LG17g09960	Cucurbita pepo (Zucchini)	cpewgoB0412
Bhi04G001661	Cp4.1LG12g04880	Cucurbita pepo (Zucchini)	cpewgoB0198
Bhi04G001661	Carg04923	Silver-seed gourd	carwgoB0095
Bhi04G001661	Carg22631	Silver-seed gourd	carwgoB0274
Bhi04G001661	Cla97C08G147160	Watermelon (97103) v2	wgowmbB332

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi04G001661	Cucumber (Gy14) v1	cgywgoB732
Bhi04G001661	Cucumber (Gy14) v2	cgybwgoB553
Bhi04G001661	Cucurbita maxima (Rimu)	cmawgoB0484
Bhi04G001661	Cucurbita maxima (Rimu)	cmawgoB1115
Bhi04G001661	Cucurbita moschata (Rifu)	cmowgoB0483
Bhi04G001661	Cucurbita moschata (Rifu)	cmowgoB0484
Bhi04G001661	Cucurbita moschata (Rifu)	cmowgoB1114
Bhi04G001661	Cucurbita pepo (Zucchini)	cpewgoB0199
Bhi04G001661	Cucurbita pepo (Zucchini)	cpewgoB0409
Bhi04G001661	Wild cucumber (PI 183967)	cpiwgoB586
Bhi04G001661	Cucumber (Chinese Long) v3	cucwgoB599
Bhi04G001661	Cucumber (Chinese Long) v2	cuwgoB581
Bhi04G001661	Bottle gourd (USVL1VR-Ls)	lsiwgoB604
Bhi04G001661	Melon (DHL92) v3.6.1	medwgoB329
Bhi04G001661	Melon (DHL92) v3.6.1	medwgoB351
Bhi04G001661	Watermelon (Charleston Gray)	wcgwgoB621
Bhi04G001661	Watermelon (Charleston Gray)	wcgwgoB632
Bhi04G001661	Watermelon (97103) v2	wgowmbB322
Bhi04G001661	Watermelon (97103) v1	wgowmB303
Bhi04G001661	Silver-seed gourd	carwgoB0094
Bhi04G001661	Silver-seed gourd	carwgoB0273