Carg22631 (gene) Silver-seed gourd

Overview
NameCarg22631
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptiontranscription factor IBH1
LocationCucurbita_argyrosperma_scaffold_093 : 442114 .. 442557 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTAAATCGGGTCGAACCCCGATCCGATCTACCTCCTCCACTCTCCGATTGGCTCGAACCTTCCTCCGATCCTTTGCCAACATCAAATCCCAAGAACCCGCCATCCTTCCCTCGCCTCCCGAGCTCAGACGCCGGAGTCGACGCATAAAAATGATGGCATATTCCTCCATGGCTCGTACTGCGGGGCCACGGTGTGCTTGGGCTAGAGCCCTCCTCTTCAAGCTTCGGACGCGAGCTAGACACCGGACTCTAATAACACGGCGCCGCCACCACCACCGCTCGGACGACCGGGTGGGGAAGCTCCGGCGGTTGGTGCCCGGTGGGGAGAGCATGGATGTGTGCACCTTGTTAGAGGAAACTGGGGAGTATATCCAATGCCTGAGCGCGCAGGTTAAGGTGATGAAAGCCATATGTGATCATCAGTTTTCAACCAATTGA

mRNA sequence

ATGGCTTCTAAATCGGGTCGAACCCCGATCCGATCTACCTCCTCCACTCTCCGATTGGCTCGAACCTTCCTCCGATCCTTTGCCAACATCAAATCCCAAGAACCCGCCATCCTTCCCTCGCCTCCCGAGCTCAGACGCCGGAGTCGACGCATAAAAATGATGGCATATTCCTCCATGGCTCGTACTGCGGGGCCACGGTGTGCTTGGGCTAGAGCCCTCCTCTTCAAGCTTCGGACGCGAGCTAGACACCGGACTCTAATAACACGGCGCCGCCACCACCACCGCTCGGACGACCGGGTGGGGAAGCTCCGGCGGTTGGTGCCCGGTGGGGAGAGCATGGATGTGTGCACCTTGTTAGAGGAAACTGGGGAGTATATCCAATGCCTGAGCGCGCAGGTTAAGGTGATGAAAGCCATATGTGATCATCAGTTTTCAACCAATTGA

Coding sequence (CDS)

ATGGCTTCTAAATCGGGTCGAACCCCGATCCGATCTACCTCCTCCACTCTCCGATTGGCTCGAACCTTCCTCCGATCCTTTGCCAACATCAAATCCCAAGAACCCGCCATCCTTCCCTCGCCTCCCGAGCTCAGACGCCGGAGTCGACGCATAAAAATGATGGCATATTCCTCCATGGCTCGTACTGCGGGGCCACGGTGTGCTTGGGCTAGAGCCCTCCTCTTCAAGCTTCGGACGCGAGCTAGACACCGGACTCTAATAACACGGCGCCGCCACCACCACCGCTCGGACGACCGGGTGGGGAAGCTCCGGCGGTTGGTGCCCGGTGGGGAGAGCATGGATGTGTGCACCTTGTTAGAGGAAACTGGGGAGTATATCCAATGCCTGAGCGCGCAGGTTAAGGTGATGAAAGCCATATGTGATCATCAGTTTTCAACCAATTGA

Protein sequence

MASKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRCAWARALLFKLRTRARHRTLITRRRHHHRSDDRVGKLRRLVPGGESMDVCTLLEETGEYIQCLSAQVKVMKAICDHQFSTN
Homology
[Close]
BLAST of Carg22631 vs. NCBI nr
Match: XP_023548405.1 (transcription factor IBH1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 8.6e-63
Identity = 134/147 (91.16%), Postives = 139/147 (94.56%), Query Frame = 0 

Query: 1   MASKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMA 60
           MASKSGRTPIRSTS+ LRLARTFLRSFANIKSQEPAILPSPPEL+R+SRRIKM+AYSSMA
Sbjct: 1   MASKSGRTPIRSTSTALRLARTFLRSFANIKSQEPAILPSPPELKRQSRRIKMVAYSSMA 60

Query: 61  RTAGPRCAWARALLFKLRTRARHRTLITXXXXXXXSDDRVGKLRRLVPGGESMDVCTLLE 120
           R AGPRCAWARALLFKLR RARHRTLIT XXXXXX DDRVGKLRRLVPGGE MDVC+LLE
Sbjct: 61  RAAGPRCAWARALLFKLRMRARHRTLITRXXXXXXXDDRVGKLRRLVPGGERMDVCSLLE 120

Query: 121 ETGEYIQCLSAQVKVMKAICDHQFSTN 148
           ETGEYIQCL  QVKVMKAICDHQFSTN
Sbjct: 121 ETGEYIQCLRTQVKVMKAICDHQFSTN 147

[Close]
BLAST of Carg22631 vs. NCBI nr
Match: XP_023005092.1 (transcription factor IBH1 [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 2.7e-40
Identity = 100/147 (68.03%), Postives = 111/147 (75.51%), Query Frame = 0 

Query: 1   MASKSGRTPIRSTSSTLRLARTFLRSFANIKSQEP--AILPSPPELRRRSRRIKMMAYSS 60
           MA +SG TP+ S+SS+LRLARTFLRSF+ IKS+ P  A   S  ELRRRSRRIK+ AYSS
Sbjct: 1   MAYESGITPMNSSSSSLRLARTFLRSFSRIKSRRPTTAASRSAFELRRRSRRIKIAAYSS 60

Query: 61  MARTAGPRCAWARALLFKLRTRARHRTLITXXXXXXXS---DDRVGKLRRLVPGGESMDV 120
           MAR AGP+  WARALLFKL TRARHRT +        S   DD VGKLRRLVPGG+ MDV
Sbjct: 61  MARVAGPQRTWARALLFKLNTRARHRTSMRRRCSTMPSAYPDDHVGKLRRLVPGGDGMDV 120

Query: 121 CTLLEETGEYIQCLSAQVKVMKAICDH 143
           CTLLEET +YI CLSAQVKVM AI  H
Sbjct: 121 CTLLEETADYIHCLSAQVKVMNAIAHH 147

[Close]
BLAST of Carg22631 vs. NCBI nr
Match: XP_008464343.1 (PREDICTED: transcription factor IBH1 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 6.0e-40
Identity = 98/147 (66.67%), Postives = 110/147 (74.83%), Query Frame = 0 

Query: 3   SKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPS--PPELRRRSRRIKMMAYSSMA 62
           SKS  T + STSS  R ARTFLR F+ IKSQ  A   S  P +L+R+S+RIKM+AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RTAGPRCAWARALLFKLRTRARHRTLITXXXXXXXS-DDRVGKLRRLVPGGESMDVCTLL 122
           R AGPR AWARALLFKL+TR RHRTL+        S DD+VGKLRRL+PGGE+MDVCTLL
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLL 123

Query: 123 EETGEYIQCLSAQVKVMKAICDHQFST 147
           EET  YI CLS QVKVMKAI D   ST
Sbjct: 124 EETANYIHCLSTQVKVMKAISDQHLST 150

[Close]
BLAST of Carg22631 vs. NCBI nr
Match: XP_011658387.1 (PREDICTED: transcription factor IBH1 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37
Identity = 95/146 (65.07%), Postives = 106/146 (72.60%), Query Frame = 0 

Query: 3   SKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPS--PPELRRRSRRIKMMAYSSMA 62
           SKS  T + STSS L  ARTFLR F+ IKSQ  A   S  P +L+R+SRRIKM AYSSMA
Sbjct: 4   SKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFASAPPDQLKRQSRRIKMAAYSSMA 63

Query: 63  RTAGPRCAWARALLFKLRTRARHRTLI-TXXXXXXXSDDRVGKLRRLVPGGESMDVCTLL 122
           R AG R AWARALLF+L TR RH+TL+         SDD VGKLRRL+PGGE+MDVCTLL
Sbjct: 64  RVAGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLL 123

Query: 123 EETGEYIQCLSAQVKVMKAICDHQFS 146
           EET  YI CLS QVKVMKAI +H  S
Sbjct: 124 EETANYIHCLSTQVKVMKAISNHHLS 149

[Close]
BLAST of Carg22631 vs. NCBI nr
Match: KGN45911.1 (hypothetical protein Csa_6G020740 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 5.1e-31
Identity = 87/144 (60.42%), Postives = 99/144 (68.75%), Query Frame = 0 

Query: 3   SKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMART 62
           SKS  T + STSS L  ART   +FA+           P +L+R+SRRIKM AYSSMAR 
Sbjct: 4   SKSAITLLNSTSSRLCFART-SATFAS---------APPDQLKRQSRRIKMAAYSSMARV 63

Query: 63  AGPRCAWARALLFKLRTRARHRTLI-TXXXXXXXSDDRVGKLRRLVPGGESMDVCTLLEE 122
           AG R AWARALLF+L TR RH+TL+         SDD VGKLRRL+PGGE+MDVCTLLEE
Sbjct: 64  AGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEE 123

Query: 123 TGEYIQCLSAQVKVMKAICDHQFS 146
           T  YI CLS QVKVMKAI +H  S
Sbjct: 124 TANYIHCLSTQVKVMKAISNHHLS 137

[Close]
BLAST of Carg22631 vs. TAIR10
Match: AT2G43060.1 (ILI1 binding bHLH 1)

HSP 1 Score: 72.0 bits (175), Expect = 3.4e-13
Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 0 

Query: 23  FLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRC-AWARALL------- 82
           FL+S +N++ Q P    +P +   R R+IK  AY SMAR AG     W+RALL       
Sbjct: 22  FLQSLSNLRKQNP--FDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDD 81

Query: 83  FKLRTRARHRTLITXXXXXXXS-----DDRVGKLRRLVPGGESMDVCTLLEETGEYIQCL 142
            K+   +R +  I+             ++   +LR LVPGG  M+   L+EET  YI+CL
Sbjct: 82  NKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIKCL 141

[Close]
BLAST of Carg22631 vs. TAIR10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators)

HSP 1 Score: 45.8 bits (107), Expect = 2.6e-05
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 97  DDRVGKLRRLVPGGESMDVCTLLEETGEYIQCLSAQVKVMKAI 140
           ++R+ +L++L+PGGE M+V  +L E G YI+CL  Q   +K+I
Sbjct: 111 EERLRELKKLLPGGEEMNVEEMLSEIGNYIKCLELQTIALKSI 153

[Close]
BLAST of Carg22631 vs. TAIR10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1))

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 19/41 (46.34%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 99  RVGKLRRLVPGGESMDVCTLLEETGEYIQCLSAQVKVMKAI 140
           R+ +L++L+PGGE M++  +L E G YI CL  Q+ V+K+I
Sbjct: 129 RLKELQKLLPGGEEMNMEEILSEIGSYIVCLELQMIVLKSI 169

[Close]
BLAST of Carg22631 vs. TAIR10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 40.8 bits (94), Expect = 8.4e-04
Identity = 37/145 (25.52%), Postives = 59/145 (40.69%), Query Frame = 0 

Query: 25  RSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRCAWARALL---FKLRTRA 84
           ++   ++    A   S P  ++R + ++  A  ++A +A  R  W+RA+L    KL+ R 
Sbjct: 63  QALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRK 122

Query: 85  RHR----------TLITXXXXXXXSDDRVGKLR-----------------RLVPGGESMD 140
           + R          T +           RV  LR                 RLVPG     
Sbjct: 123 QRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQS 182

[Close]
BLAST of Carg22631 vs. TAIR10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 40.8 bits (94), Expect = 8.4e-04
Identity = 18/50 (36.00%), Postives = 30/50 (60.00%), Query Frame = 0 

Query: 98  DRVGKLRRLVPGGESMDVCTLLEETGEYIQCLSAQVKVMKAICDHQFSTN 148
           +++  L+ LVPGG  MD  ++L+E   Y++ L AQVK ++ +      TN
Sbjct: 293 EKIRVLQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALENLRPKLDQTN 342

[Close]
BLAST of Carg22631 vs. Swiss-Prot
Match: sp|Q9SKX1|IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.2e-12
Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 0 

Query: 23  FLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRC-AWARALL------- 82
           FL+S +N++ Q P    +P +   R R+IK  AY SMAR AG     W+RALL       
Sbjct: 22  FLQSLSNLRKQNP--FDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDD 81

Query: 83  FKLRTRARHRTLITXXXXXXXS-----DDRVGKLRRLVPGGESMDVCTLLEETGEYIQCL 142
            K+   +R +  I+             ++   +LR LVPGG  M+   L+EET  YI+CL
Sbjct: 82  NKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIKCL 141

[Close]
BLAST of Carg22631 vs. Swiss-Prot
Match: sp|Q7XR02|IBH1_ORYSJ (Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 SV=2)

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-10
Identity = 61/163 (37.42%), Postives = 78/163 (47.85%), Query Frame = 0 

Query: 19  LARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRCAWARALLFKLR 78
           LA  FLR+ + I    P        + RR+R I+  AYSSMAR A PR AW+RALL ++R
Sbjct: 44  LAFHFLRALSRIHRATP--------VTRRTRTIRRAAYSSMARAASPRRAWSRALLGQVR 103

Query: 79  TRARHRTL----------------------------------------ITXXXXXXXSDD 138
            R R RTL                                          XXXXXXX   
Sbjct: 104 AR-RSRTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 163

Query: 139 RVGKLRRLVPGGESMDVCTLLEETGEYIQCLSAQVKVMKAICD 142
               LRRLVPGG  M+  +LLEET +Y++ L AQV++M+ + D
Sbjct: 164 XAEALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGLVD 197

[Close]
BLAST of Carg22631 vs. Swiss-Prot
Match: sp|Q01I07|IBH1_ORYSI (Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 58/162 (35.80%), Postives = 74/162 (45.68%), Query Frame = 0 

Query: 19  LARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRCAWARALLFKLR 78
           LA  FLR+ + I    P        + RR+R I+  AYSSMAR A PR AW+RALL + R
Sbjct: 44  LAFHFLRALSRIHRATP--------VTRRTRTIRRAAYSSMARAASPRRAWSRALLGQAR 103

Query: 79  TRARH---------------------------------------RTLITXXXXXXXSDDR 138
            R                                               XXXXXXX   R
Sbjct: 104 ARRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR 163

Query: 139 VGKLRRLVPGGESMDVCTLLEETGEYIQCLSAQVKVMKAICD 142
              LRRLVPGG  M+  +LLEET +Y++ L AQV++M+ + D
Sbjct: 164 ADALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGLVD 197

[Close]
BLAST of Carg22631 vs. Swiss-Prot
Match: sp|Q9SUM5|BH146_ARATH (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.7e-04
Identity = 19/43 (44.19%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 97  DDRVGKLRRLVPGGESMDVCTLLEETGEYIQCLSAQVKVMKAI 140
           ++R+ +L++L+PGGE M+V  +L E G YI+CL  Q   +K+I
Sbjct: 111 EERLRELKKLLPGGEEMNVEEMLSEIGNYIKCLELQTIALKSI 153

[Close]
BLAST of Carg22631 vs. TrEMBL
Match: tr|A0A1S3CLD3|A0A1S3CLD3_CUCME (transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.0e-40
Identity = 98/147 (66.67%), Postives = 110/147 (74.83%), Query Frame = 0 

Query: 3   SKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPS--PPELRRRSRRIKMMAYSSMA 62
           SKS  T + STSS  R ARTFLR F+ IKSQ  A   S  P +L+R+S+RIKM+AYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RTAGPRCAWARALLFKLRTRARHRTLITXXXXXXXS-DDRVGKLRRLVPGGESMDVCTLL 122
           R AGPR AWARALLFKL+TR RHRTL+        S DD+VGKLRRL+PGGE+MDVCTLL
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLL 123

Query: 123 EETGEYIQCLSAQVKVMKAICDHQFST 147
           EET  YI CLS QVKVMKAI D   ST
Sbjct: 124 EETANYIHCLSTQVKVMKAISDQHLST 150

[Close]
BLAST of Carg22631 vs. TrEMBL
Match: tr|A0A0A0KDQ3|A0A0A0KDQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.4e-31
Identity = 87/144 (60.42%), Postives = 99/144 (68.75%), Query Frame = 0 

Query: 3   SKSGRTPIRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMART 62
           SKS  T + STSS L  ART   +FA+           P +L+R+SRRIKM AYSSMAR 
Sbjct: 4   SKSAITLLNSTSSRLCFART-SATFAS---------APPDQLKRQSRRIKMAAYSSMARV 63

Query: 63  AGPRCAWARALLFKLRTRARHRTLI-TXXXXXXXSDDRVGKLRRLVPGGESMDVCTLLEE 122
           AG R AWARALLF+L TR RH+TL+         SDD VGKLRRL+PGGE+MDVCTLLEE
Sbjct: 64  AGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEE 123

Query: 123 TGEYIQCLSAQVKVMKAICDHQFS 146
           T  YI CLS QVKVMKAI +H  S
Sbjct: 124 TANYIHCLSTQVKVMKAISNHHLS 137

[Close]
BLAST of Carg22631 vs. TrEMBL
Match: tr|A0A2P4IZA5|A0A2P4IZA5_QUESU (Transcription factor ibh1 OS=Quercus suber OX=58331 GN=CFP56_26828 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 64/141 (45.39%), Postives = 89/141 (63.12%), Query Frame = 0 

Query: 10  IRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRCAW 69
           + + S  ++ AR F+R+   ++   P+   S  E+R+RS+RIK+ AYSSMA   G R AW
Sbjct: 8   LNTNSHKIKFARRFIRTLLRMRKNAPS-SSSIEEIRKRSQRIKIAAYSSMAHAVGSRRAW 67

Query: 70  ARALLFKLRTRARHRTLI--------TXXXXXXXSDDRVGKLRRLVPGGESMDVCTLLEE 129
           +RA+LFKLR RARH  ++                   +  KLR+LVPGG++MD+C+LLEE
Sbjct: 68  SRAILFKLRNRARHHGMMRRRSMKKRVIKNDPPGDQSQTNKLRQLVPGGKAMDMCSLLEE 127

Query: 130 TGEYIQCLSAQVKVMKAICDH 143
           T  YI+CLS QVKVM+ I DH
Sbjct: 128 TAHYIRCLSTQVKVMQTIADH 147

[Close]
BLAST of Carg22631 vs. TrEMBL
Match: tr|A0A2N9I4P0|A0A2N9I4P0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.4e-23
Identity = 64/145 (44.14%), Postives = 92/145 (63.45%), Query Frame = 0 

Query: 10  IRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRCAW 69
           + + S  ++ AR F+R+ + +K   P+   S  E+R+RS+RIK+ AYSSMA   G + AW
Sbjct: 8   LNTNSRRIKFARRFIRTLSKMKKTAPS-SSSIDEVRKRSQRIKIAAYSSMAHAVGSKKAW 67

Query: 70  ARALLFKLRTRARHRTLI------------TXXXXXXXSDDRVGKLRRLVPGGESMDVCT 129
           +RA+LFKLR RARH+ ++                      ++  KLR+LVPGG++MD+C+
Sbjct: 68  SRAILFKLRNRARHQGMMMRRRSIGFKKKRAIKNDPPGEQNQTKKLRQLVPGGKAMDMCS 127

Query: 130 LLEETGEYIQCLSAQVKVMKAICDH 143
           LLEET  YI+CLS QVKVM+ I DH
Sbjct: 128 LLEETAHYIRCLSTQVKVMQTIADH 151

[Close]
BLAST of Carg22631 vs. TrEMBL
Match: tr|A0A2I4E8S8|A0A2I4E8S8_9ROSI (transcription factor IBH1-like OS=Juglans regia OX=51240 GN=LOC108987351 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22
Identity = 63/145 (43.45%), Postives = 86/145 (59.31%), Query Frame = 0 

Query: 10  IRSTSSTLRLARTFLRSFANIKSQEPAILPSPPELRRRSRRIKMMAYSSMARTAGPRCAW 69
           +   S   + AR FL + + +++  P    +  E+R+RS +IK+ AY SMART G R AW
Sbjct: 8   LNPNSRKTKFARRFLCALSQMRNPRPVSSSNDEEVRKRSHKIKIAAYLSMARTVGSRRAW 67

Query: 70  ARALLFKLRTRARHRTLITXXXXXXXSDDRV------------GKLRRLVPGGESMDVCT 129
           +RALLFKLRTRAR   ++           RV             KLR LVPGG++MD+C+
Sbjct: 68  SRALLFKLRTRARRHNMMIGRRSLCLKKKRVIKNDPQGELSQTNKLRHLVPGGKTMDMCS 127

Query: 130 LLEETGEYIQCLSAQVKVMKAICDH 143
           LLEET  ++ CL+ QVKVM+ I DH
Sbjct: 128 LLEETAHFVTCLATQVKVMQTIADH 152

The following BLAST results are available for this feature:
BLAST of Carg22631 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023548405.18.6e-6391.16transcription factor IBH1 [Cucurbita pepo subsp. pepo][more]
XP_023005092.12.7e-4068.03transcription factor IBH1 [Cucurbita maxima][more]
XP_008464343.16.0e-4066.67PREDICTED: transcription factor IBH1 [Cucumis melo][more]
XP_011658387.12.1e-3765.07PREDICTED: transcription factor IBH1 [Cucumis sativus][more]
KGN45911.15.1e-3160.42hypothetical protein Csa_6G020740 [Cucumis sativus][more]
BLAST of Carg22631 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43060.13.4e-1337.88ILI1 binding bHLH 1[more]
AT4G30180.12.6e-0544.19sequence-specific DNA binding transcription factors;transcription regulators[more]
AT2G18969.11.3e-0446.34BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc... [more]
AT3G06590.18.4e-0425.52basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G21330.18.4e-0436.00basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Carg22631 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SKX1|IBH1_ARATH6.2e-1237.88Transcription factor IBH1 OS=Arabidopsis thaliana OX=3702 GN=IBH1 PE=1 SV=1[more]
sp|Q7XR02|IBH1_ORYSJ5.8e-1037.42Transcription factor IBH1 OS=Oryza sativa subsp. japonica OX=39947 GN=IBH1 PE=1 ... [more]
sp|Q01I07|IBH1_ORYSI2.2e-0935.80Transcription factor IBH1 OS=Oryza sativa subsp. indica OX=39946 GN=IBH1 PE=3 SV... [more]
sp|Q9SUM5|BH146_ARATH4.7e-0444.19Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=... [more]
BLAST of Carg22631 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CLD3|A0A1S3CLD3_CUCME4.0e-4066.67transcription factor IBH1 OS=Cucumis melo OX=3656 GN=LOC103502249 PE=4 SV=1[more]
tr|A0A0A0KDQ3|A0A0A0KDQ3_CUCSA3.4e-3160.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020740 PE=4 SV=1[more]
tr|A0A2P4IZA5|A0A2P4IZA5_QUESU1.5e-2345.39Transcription factor ibh1 OS=Quercus suber OX=58331 GN=CFP56_26828 PE=4 SV=1[more]
tr|A0A2N9I4P0|A0A2N9I4P0_FAGSY4.4e-2344.14Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46872 PE=4 SV=1[more]
tr|A0A2I4E8S8|A0A2I4E8S8_9ROSI1.7e-2243.45transcription factor IBH1-like OS=Juglans regia OX=51240 GN=LOC108987351 PE=4 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR036638HLH_DNA-bd_sf
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22631-RACarg22631-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 18..141
NoneNo IPR availablePANTHERPTHR33124:SF31TRANSCRIPTION FACTOR IBH1coord: 18..141
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 80..129
score: 9.21
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILYSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 80..139