CmaCh17G005710 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh17G005710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transcription factor, putative
Location	Cma_Chr17 : 4698940 .. 4699383 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTAAATCGGGTCGAACCCCGATCCGATCTACCTCCACCACTCTCCGATTGGCTCGAACCTTCCTCCGATCCTTTGCCAACATCAAATCCCAAGAACCCGCCATCCTTCCCTCGCCTCCGGAGCTCAGACGTCGGAGTCAACGCATTAAAATGGTGGCATATTCCTCCATGGCCCGTGCGGCCGGGCCACGGTGTGCTTGGGCTAGAGCCCTCCTCTTCAAGCTTCGGACGCGAGCTAGACACCGGACTCTAATAACACGGCGCCGCCAACACCACCGCTCGGACAACCGGGTGGGGAAGCTCCGGCGGCTGGTGCCCGGTGGGGAGAGCATGGATGTGTGCAGCTTGTTGGAGGAAACTGGGGAGTATATCCAATGCCTGAGGACGCAGGTTAAGGTGATGAAAGCCATATGTGATCACCAGTTTTCAACCAATTGA

mRNA sequence

ATGGCTTCTAAATCGGGTCGAACCCCGATCCGATCTACCTCCACCACTCTCCGATTGGCTCGAACCTTCCTCCGATCCTTTGCCAACATCAAATCCCAAGAACCCGCCATCCTTCCCTCGCCTCCGGAGCTCAGACGTCGGAGTCAACGCATTAAAATGGTGGCATATTCCTCCATGGCCCGTGCGGCCGGGCCACGGTGTGCTTGGGCTAGAGCCCTCCTCTTCAAGCTTCGGACGCGAGCTAGACACCGGACTCTAATAACACGGCGCCGCCAACACCACCGCTCGGACAACCGGGTGGGGAAGCTCCGGCGGCTGGTGCCCGGTGGGGAGAGCATGGATGTGTGCAGCTTGTTGGAGGAAACTGGGGAGTATATCCAATGCCTGAGGACGCAGGTTAAGGTGATGAAAGCCATATGTGATCACCAGTTTTCAACCAATTGA

Coding sequence (CDS)

ATGGCTTCTAAATCGGGTCGAACCCCGATCCGATCTACCTCCACCACTCTCCGATTGGCTCGAACCTTCCTCCGATCCTTTGCCAACATCAAATCCCAAGAACCCGCCATCCTTCCCTCGCCTCCGGAGCTCAGACGTCGGAGTCAACGCATTAAAATGGTGGCATATTCCTCCATGGCCCGTGCGGCCGGGCCACGGTGTGCTTGGGCTAGAGCCCTCCTCTTCAAGCTTCGGACGCGAGCTAGACACCGGACTCTAATAACACGGCGCCGCCAACACCACCGCTCGGACAACCGGGTGGGGAAGCTCCGGCGGCTGGTGCCCGGTGGGGAGAGCATGGATGTGTGCAGCTTGTTGGAGGAAACTGGGGAGTATATCCAATGCCTGAGGACGCAGGTTAAGGTGATGAAAGCCATATGTGATCACCAGTTTTCAACCAATTGA

Protein sequence

MASKSGRTPIRSTSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAGPRCAWARALLFKLRTRARHRTLITRRRQHHRSDNRVGKLRRLVPGGESMDVCSLLEETGEYIQCLRTQVKVMKAICDHQFSTN

Homology

[Close]

BLAST of CmaCh17G005710 vs. Swiss-Prot
Match: IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 51/132 (38.64%), Postives = 73/132 (55.30%), Query Frame = 1


Query: 23  FLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAGPRC-AWARALLFKLR--- 82
           FL+S +N++ Q P    +P +   R ++IK  AY SMARAAG     W+RALL +     
Sbjct: 22  FLQSLSNLRKQNP--FDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDD 81

Query: 83  ------TRARHRTLITRRRQHHRS---DNRVGKLRRLVPGGESMDVCSLLEETGEYIQCL 142
                 +R + +    RRR + R+   +    +LR LVPGG  M+   L+EET  YI+CL
Sbjct: 82  NKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIKCL 141

[Close]

BLAST of CmaCh17G005710 vs. Swiss-Prot
Match: IBH1_ORYSJ (Transcription factor IBH1 OS=Oryza sativa subsp. japonica GN=IBH1 PE=1 SV=2)

HSP 1 Score: 71.2 bits (173), Expect = 1.0e-11
Identity = 60/170 (35.29%), Postives = 81/170 (47.65%), Query Frame = 1


Query: 12  STSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAGPRCAWAR 71
           + +T   LA  FLR+ + I    P        + RR++ I+  AYSSMARAA PR AW+R
Sbjct: 37  AAATKHMLAFHFLRALSRIHRATP--------VTRRTRTIRRAAYSSMARAASPRRAWSR 96

Query: 72  ALLFKLRTRARHRTL------ITRRR---------------------------------- 131
           ALL ++R R R RTL      + RRR                                  
Sbjct: 97  ALLGQVRAR-RSRTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPP 156

Query: 132 QHHRSDNRVGKLRRLVPGGESMDVCSLLEETGEYIQCLRTQVKVMKAICD 142
           +      R   LRRLVPGG  M+  SLLEET +Y++ LR QV++M+ + D
Sbjct: 157 RQQGEPPRAEALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGLVD 197

[Close]

BLAST of CmaCh17G005710 vs. Swiss-Prot
Match: IBH1_ORYSI (Transcription factor IBH1 OS=Oryza sativa subsp. indica GN=IBH1 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-11
Identity = 60/170 (35.29%), Postives = 80/170 (47.06%), Query Frame = 1


Query: 12  STSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAGPRCAWAR 71
           + +T   LA  FLR+ + I    P        + RR++ I+  AYSSMARAA PR AW+R
Sbjct: 37  AAATKHMLAFHFLRALSRIHRATP--------VTRRTRTIRRAAYSSMARAASPRRAWSR 96

Query: 72  ALLFKLRTRARHRTL------ITRRR---------------------------------- 131
           ALL + R R R RTL      + RRR                                  
Sbjct: 97  ALLGQARAR-RSRTLMRRAAVLVRRRVVAAPAPSPASARGVRIIAAGETSAAARAVPPPP 156

Query: 132 QHHRSDNRVGKLRRLVPGGESMDVCSLLEETGEYIQCLRTQVKVMKAICD 142
           +      R   LRRLVPGG  M+  SLLEET +Y++ LR QV++M+ + D
Sbjct: 157 RQQGEPPRADALRRLVPGGAGMEYSSLLEETADYLRSLRAQVQLMQGLVD 197

[Close]

BLAST of CmaCh17G005710 vs. TrEMBL
Match: A0A0A0KDQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020740 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 9.1e-31
Identity = 86/144 (59.72%), Postives = 102/144 (70.83%), Query Frame = 1


Query: 3   SKSGRTPIRSTSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARA 62
           SKS  T + STS+ L  ART   +FA+           P +L+R+S+RIKM AYSSMAR 
Sbjct: 4   SKSAITLLNSTSSRLCFARTSA-TFASAP---------PDQLKRQSRRIKMAAYSSMARV 63

Query: 63  AGPRCAWARALLFKLRTRARHRTLITR-RRQHHRSDNRVGKLRRLVPGGESMDVCSLLEE 122
           AG R AWARALLF+L TR RH+TL+ R RR    SD+ VGKLRRL+PGGE+MDVC+LLEE
Sbjct: 64  AGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEE 123

Query: 123 TGEYIQCLRTQVKVMKAICDHQFS 146
           T  YI CL TQVKVMKAI +H  S
Sbjct: 124 TANYIHCLSTQVKVMKAISNHHLS 137

[Close]

BLAST of CmaCh17G005710 vs. TrEMBL
Match: A0A067L347_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23828 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.1e-23
Identity = 68/144 (47.22%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 13  TSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAGPRCAWARA 72
           ++T  R AR FL S + I++       S  E+RRRS+RIK+ AYSSMARA G R AW+RA
Sbjct: 5   SNTKTRFARGFLISLSKIRTGNRIGPVSDGEIRRRSRRIKIAAYSSMARAVGSRRAWSRA 64

Query: 73  LLFKLRTRARHRTLITRRRQHHRSDNRVGK--------------LRRLVPGGESMDVCSL 132
            L K+R RAR R ++  R+   +   RV K              LR+LVPGG +MD+C L
Sbjct: 65  FLLKVRNRARFRGILKNRKMGLKKKKRVTKSNNKVTREISKTDMLRKLVPGGAAMDICGL 124

Query: 133 LEETGEYIQCLRTQVKVMKAICDH 143
           LEET  Y++CL+TQV+VM+ I DH
Sbjct: 125 LEETAHYMECLQTQVEVMQNIVDH 148

[Close]

BLAST of CmaCh17G005710 vs. TrEMBL
Match: M5Y5I2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012353mg PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.4e-22
Identity = 75/158 (47.47%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 8   TPIRSTSTTLRL-------ARTFLRSFANIKSQEPAILPSPPE---LRRRSQRIKMVAYS 67
           T I +T  TL +       A  F+RS   I++  P    S  E   +++R QRIK+ AY 
Sbjct: 13  TNITTTGVTLNIKSCRTKFAHRFVRSLLQIRNHAPPSSSSSSEEKLIQKRRQRIKIAAYL 72

Query: 68  SMARAAGPRCAWARALLFKLRTRA-RHRT----LITRRRQHHRSDNRVG--------KLR 127
           SMA A GPR  W+RALLFKLR RA RHR     ++ RR+    S +  G        KLR
Sbjct: 73  SMAHAVGPRMNWSRALLFKLRNRACRHRKKKRIVVIRRKTKKASRSSQGSVPVDQAKKLR 132

Query: 128 RLVPGGESMDVCSLLEETGEYIQCLRTQVKVMKAICDH 143
           RLVPG +SMD+CSLLEET  YI CL TQ+KVM+A+ DH
Sbjct: 133 RLVPGAKSMDLCSLLEETAHYITCLSTQIKVMQALADH 170

[Close]

BLAST of CmaCh17G005710 vs. TrEMBL
Match: A5AK99_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033284 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 1


Query: 5   SGRTPIRSTSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAG 64
           S R    ++S  +R AR FL+S   I+ + P  L S  E+R+RS+RIKM AYSSMA   G
Sbjct: 3   SNRVFFXTSSRKVRCARRFLQSLLRIRQRRPGSLSSE-EVRQRSRRIKMAAYSSMACTVG 62

Query: 65  PRCAWARALLFKLRTRARHRTLITRR-----RQHHRSDNRVGKLRRLVPGGESMDVCSLL 124
            R AW+RA++F+L++RA     + RR     ++  R  ++  +LR LVPGGE++D C+LL
Sbjct: 63  SRRAWSRAIIFRLQSRAGRHGRMRRRCLGVKKKPSREMSQADRLRDLVPGGEALDFCNLL 122

Query: 125 EETGEYIQCLRTQVKVMKAICD 142
           EET  YI+CL +QV++MK+I D
Sbjct: 123 EETAHYIKCLSSQVEIMKSIAD 143

[Close]

BLAST of CmaCh17G005710 vs. TrEMBL
Match: B9IAC4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14730g PE=4 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 2.9e-21
Identity = 74/163 (45.40%), Postives = 96/163 (58.90%), Query Frame = 1


Query: 1   MASKSGRTPIRSTSTTLRLARTFLRSFANIKSQEP----AILPSPPELRRRS-QRIKMVA 60
           M SK       + S   R AR FLRS   +K  +         S  E+R+R+ QRIK  A
Sbjct: 1   MTSKHVIATTHTGSIKNRFARRFLRSLLKVKRSDRLGTGTGFQSNEEIRKRNAQRIKTAA 60

Query: 61  YSSMARAAGPRCAWARALLFKLRTRAR-------HRTLITRRRQHHRSDNRV-------- 120
           Y SMAR  GPR  W+RALLFKLR RAR        R L++++++  R +N+V        
Sbjct: 61  YRSMARVVGPRKNWSRALLFKLRYRARIQGAGLRKRCLVSKKKRVLRKENKVQVISREPS 120

Query: 121 --GKLRRLVPGGESMDVCSLLEETGEYIQCLRTQVKVMKAICD 142
               LR+LVPGG+SMD+CSLL+ET  YI+CL TQVKVM++I D
Sbjct: 121 RADNLRKLVPGGDSMDICSLLDETAHYIKCLATQVKVMESIAD 163

[Close]

BLAST of CmaCh17G005710 vs. TAIR10
Match: AT2G43060.1 (AT2G43060.1 ILI1 binding bHLH 1)

HSP 1 Score: 74.3 bits (181), Expect = 6.9e-14
Identity = 51/132 (38.64%), Postives = 73/132 (55.30%), Query Frame = 1


Query: 23  FLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAGPRC-AWARALLFKLR--- 82
           FL+S +N++ Q P    +P +   R ++IK  AY SMARAAG     W+RALL +     
Sbjct: 22  FLQSLSNLRKQNP--FDTPDQKNYRVRKIKKAAYVSMARAAGGSSRLWSRALLRRADKDD 81

Query: 83  ------TRARHRTLITRRRQHHRS---DNRVGKLRRLVPGGESMDVCSLLEETGEYIQCL 142
                 +R + +    RRR + R+   +    +LR LVPGG  M+   L+EET  YI+CL
Sbjct: 82  NKIVRFSRRKWKISSKRRRSNQRAPVVEEAAERLRNLVPGGGGMETSKLMEETAHYIKCL 141

[Close]

BLAST of CmaCh17G005710 vs. NCBI nr
Match: gi|659128727|ref|XP_008464343.1| (PREDICTED: transcription factor IBH1 [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 1.8e-40
Identity = 99/147 (67.35%), Postives = 114/147 (77.55%), Query Frame = 1


Query: 3   SKSGRTPIRSTSTTLRLARTFLRSFANIKSQEPAILPSPP--ELRRRSQRIKMVAYSSMA 62
           SKS  T + STS+  R ARTFLR F+ IKSQ  A   S P  +L+R+SQRIKMVAYSSMA
Sbjct: 4   SKSAITLLNSTSSRFRFARTFLRLFSRIKSQRSATFASAPPDQLKRQSQRIKMVAYSSMA 63

Query: 63  RAAGPRCAWARALLFKLRTRARHRTLITRRRQHHRS-DNRVGKLRRLVPGGESMDVCSLL 122
           R AGPR AWARALLFKL+TR RHRTL+ R+R+   S D++VGKLRRL+PGGE+MDVC+LL
Sbjct: 64  RVAGPRRAWARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLL 123

Query: 123 EETGEYIQCLRTQVKVMKAICDHQFST 147
           EET  YI CL TQVKVMKAI D   ST
Sbjct: 124 EETANYIHCLSTQVKVMKAISDQHLST 150

[Close]

BLAST of CmaCh17G005710 vs. NCBI nr
Match: gi|778721990|ref|XP_011658387.1| (PREDICTED: transcription factor IBH1 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 7.1e-37
Identity = 94/146 (64.38%), Postives = 109/146 (74.66%), Query Frame = 1


Query: 3   SKSGRTPIRSTSTTLRLARTFLRSFANIKSQEPAILPSPP--ELRRRSQRIKMVAYSSMA 62
           SKS  T + STS+ L  ARTFLR F+ IKSQ  A   S P  +L+R+S+RIKM AYSSMA
Sbjct: 4   SKSAITLLNSTSSRLCFARTFLRLFSRIKSQRSATFASAPPDQLKRQSRRIKMAAYSSMA 63

Query: 63  RAAGPRCAWARALLFKLRTRARHRTLITR-RRQHHRSDNRVGKLRRLVPGGESMDVCSLL 122
           R AG R AWARALLF+L TR RH+TL+ R RR    SD+ VGKLRRL+PGGE+MDVC+LL
Sbjct: 64  RVAGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLL 123

Query: 123 EETGEYIQCLRTQVKVMKAICDHQFS 146
           EET  YI CL TQVKVMKAI +H  S
Sbjct: 124 EETANYIHCLSTQVKVMKAISNHHLS 149

[Close]

BLAST of CmaCh17G005710 vs. NCBI nr
Match: gi|700190707|gb|KGN45911.1| (hypothetical protein Csa_6G020740 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 86/144 (59.72%), Postives = 102/144 (70.83%), Query Frame = 1


Query: 3   SKSGRTPIRSTSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARA 62
           SKS  T + STS+ L  ART   +FA+           P +L+R+S+RIKM AYSSMAR 
Sbjct: 4   SKSAITLLNSTSSRLCFARTSA-TFASAP---------PDQLKRQSRRIKMAAYSSMARV 63

Query: 63  AGPRCAWARALLFKLRTRARHRTLITR-RRQHHRSDNRVGKLRRLVPGGESMDVCSLLEE 122
           AG R AWARALLF+L TR RH+TL+ R RR    SD+ VGKLRRL+PGGE+MDVC+LLEE
Sbjct: 64  AGRRRAWARALLFRLHTRPRHKTLMRRKRRPSTSSDDMVGKLRRLLPGGETMDVCTLLEE 123

Query: 123 TGEYIQCLRTQVKVMKAICDHQFS 146
           T  YI CL TQVKVMKAI +H  S
Sbjct: 124 TANYIHCLSTQVKVMKAISNHHLS 137

[Close]

BLAST of CmaCh17G005710 vs. NCBI nr
Match: gi|802560326|ref|XP_012066261.1| (PREDICTED: transcription factor IBH1 [Jatropha curcas])

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 68/144 (47.22%), Postives = 90/144 (62.50%), Query Frame = 1


Query: 13  TSTTLRLARTFLRSFANIKSQEPAILPSPPELRRRSQRIKMVAYSSMARAAGPRCAWARA 72
           ++T  R AR FL S + I++       S  E+RRRS+RIK+ AYSSMARA G R AW+RA
Sbjct: 5   SNTKTRFARGFLISLSKIRTGNRIGPVSDGEIRRRSRRIKIAAYSSMARAVGSRRAWSRA 64

Query: 73  LLFKLRTRARHRTLITRRRQHHRSDNRVGK--------------LRRLVPGGESMDVCSL 132
            L K+R RAR R ++  R+   +   RV K              LR+LVPGG +MD+C L
Sbjct: 65  FLLKVRNRARFRGILKNRKMGLKKKKRVTKSNNKVTREISKTDMLRKLVPGGAAMDICGL 124

Query: 133 LEETGEYIQCLRTQVKVMKAICDH 143
           LEET  Y++CL+TQV+VM+ I DH
Sbjct: 125 LEETAHYMECLQTQVEVMQNIVDH 148

[Close]

BLAST of CmaCh17G005710 vs. NCBI nr
Match: gi|596288525|ref|XP_007225951.1| (hypothetical protein PRUPE_ppa012353mg [Prunus persica])

HSP 1 Score: 112.8 bits (281), Expect = 4.9e-22
Identity = 75/158 (47.47%), Postives = 94/158 (59.49%), Query Frame = 1


Query: 8   TPIRSTSTTLRL-------ARTFLRSFANIKSQEPAILPSPPE---LRRRSQRIKMVAYS 67
           T I +T  TL +       A  F+RS   I++  P    S  E   +++R QRIK+ AY 
Sbjct: 13  TNITTTGVTLNIKSCRTKFAHRFVRSLLQIRNHAPPSSSSSSEEKLIQKRRQRIKIAAYL 72

Query: 68  SMARAAGPRCAWARALLFKLRTRA-RHRT----LITRRRQHHRSDNRVG--------KLR 127
           SMA A GPR  W+RALLFKLR RA RHR     ++ RR+    S +  G        KLR
Sbjct: 73  SMAHAVGPRMNWSRALLFKLRNRACRHRKKKRIVVIRRKTKKASRSSQGSVPVDQAKKLR 132

Query: 128 RLVPGGESMDVCSLLEETGEYIQCLRTQVKVMKAICDH 143
           RLVPG +SMD+CSLLEET  YI CL TQ+KVM+A+ DH
Sbjct: 133 RLVPGAKSMDLCSLLEETAHYITCLSTQIKVMQALADH 170

The following BLAST results are available for this feature:

BLAST of CmaCh17G005710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IBH1_ARATH	1.2e-12	38.64	Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1	[more]
IBH1_ORYSJ	1.0e-11	35.29	Transcription factor IBH1 OS=Oryza sativa subsp. japonica GN=IBH1 PE=1 SV=2	[more]
IBH1_ORYSI	1.3e-11	35.29	Transcription factor IBH1 OS=Oryza sativa subsp. indica GN=IBH1 PE=3 SV=1	[more]

BLAST of CmaCh17G005710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDQ3_CUCSA	9.1e-31	59.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G020740 PE=4 SV=1	[more]
A0A067L347_JATCU	9.1e-23	47.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23828 PE=4 SV=1	[more]
M5Y5I2_PRUPE	3.4e-22	47.47	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012353mg PE=4 SV=1	[more]
A5AK99_VITVI	1.3e-21	45.77	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033284 PE=4 SV=1	[more]
B9IAC4_POPTR	2.9e-21	45.40	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s14730g PE=4 SV=2	[more]

BLAST of CmaCh17G005710 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43060.1	6.9e-14	38.64	ILI1 binding bHLH 1	[more]

BLAST of CmaCh17G005710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128727\|ref\|XP_008464343.1\|	1.8e-40	67.35	PREDICTED: transcription factor IBH1 [Cucumis melo]	[more]
gi\|778721990\|ref\|XP_011658387.1\|	7.1e-37	64.38	PREDICTED: transcription factor IBH1 [Cucumis sativus]	[more]
gi\|700190707\|gb\|KGN45911.1\|	1.3e-30	59.72	hypothetical protein Csa_6G020740 [Cucumis sativus]	[more]
gi\|802560326\|ref\|XP_012066261.1\|	1.3e-22	47.22	PREDICTED: transcription factor IBH1 [Jatropha curcas]	[more]
gi\|596288525\|ref\|XP_007225951.1\|	4.9e-22	47.47	hypothetical protein PRUPE_ppa012353mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh17G005710.1	CmaCh17G005710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 80..138 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 80..129 score: 9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 80..139 score: 3.1
None	No IPR available	PANTHER	PTHR33124	FAMILY NOT NAMED	coord: 11..141 score: 1.9
None	No IPR available	PANTHER	PTHR33124:SF8	SUBFAMILY NOT NAMED	coord: 11..141 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh17G005710	CmoCh08G001020	Cucurbita moschata (Rifu)	cmacmoB378
CmaCh17G005710	Lsi08G003170	Bottle gourd (USVL1VR-Ls)	cmalsiB362
CmaCh17G005710	Cp4.1LG17g09960	Cucurbita pepo (Zucchini)	cmacpeB390
CmaCh17G005710	Cp4.1LG12g04880	Cucurbita pepo (Zucchini)	cmacpeB371
CmaCh17G005710	Bhi04G001661	Wax gourd	cmawgoB0483
CmaCh17G005710	Carg04923	Silver-seed gourd	carcmaB0109
CmaCh17G005710	Carg22631	Silver-seed gourd	carcmaB0302

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh17G005710	CmaCh08G000980	Cucurbita maxima (Rimu)	cmacmaB386

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh17G005710	Cucurbita moschata (Rifu)	cmacmoB353
CmaCh17G005710	Wild cucumber (PI 183967)	cmacpiB377
CmaCh17G005710	Wild cucumber (PI 183967)	cmacpiB381
CmaCh17G005710	Cucumber (Chinese Long) v2	cmacuB373
CmaCh17G005710	Cucumber (Chinese Long) v2	cmacuB377
CmaCh17G005710	Watermelon (Charleston Gray)	cmawcgB335
CmaCh17G005710	Cucumber (Gy14) v2	cgybcmaB760
CmaCh17G005710	Cucumber (Gy14) v2	cgybcmaB757
CmaCh17G005710	Melon (DHL92) v3.6.1	cmamedB385
CmaCh17G005710	Cucumber (Chinese Long) v3	cmacucB0443
CmaCh17G005710	Cucumber (Chinese Long) v3	cmacucB0448
CmaCh17G005710	Watermelon (97103) v2	cmawmbB385
CmaCh17G005710	Cucumber (Gy14) v1	cgycmaB1002