Bhi04G000045 (gene) Wax gourd

Overview
NameBhi04G000045
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 1511688 .. 1511870 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGTTCGGTATTAAGCCAAAAGAGAAACATTCCGTTCAGCAACACGACCATGGCTATTGCTGGCACTCTCCTCCTCGGAATCGGCTACATGGTTTATGTCAACAGATCCAGAAATAATGTTCATAATAATAACAATATTAACCGCTAA

mRNA sequence

ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGTTCGGTATTAAGCCAAAAGAGAAACATTCCGTTCAGCAACACGACCATGGCTATTGCTGGCACTCTCCTCCTCGGAATCGGCTACATGGTTTATGTCAACAGATCCAGAAATAATGTTCATAATAATAACAATATTAACCGCTAA

Coding sequence (CDS)

ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGTTCGGTATTAAGCCAAAAGAGAAACATTCCGTTCAGCAACACGACCATGGCTATTGCTGGCACTCTCCTCCTCGGAATCGGCTACATGGTTTATGTCAACAGATCCAGAAATAATGTTCATAATAATAACAATATTAACCGCTAA

Protein sequence

MALNDDASRKTTGSVLSQKRNIPFSNTTMAIAGTLLLGIGYMVYVNRSRNNVHNNNNINR
Homology
[Close]
BLAST of Bhi04G000045 vs. TrEMBL
Match: tr|A0A0A0LSP0|A0A0A0LSP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382690 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.9e-15
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 1  MALNDDASRKTTGSVLSQKRNIPFSNTTMAIAGTLLLGIGYMVYVNRSRNNVHNNNNINR 60
          M +ND+ASRKTTG VLS+KRN+PFSNTT+AIAGTLLLGIGYMVYVN+S+N   NN+NI+R
Sbjct: 1  MGVNDEASRKTTGWVLSRKRNLPFSNTTIAIAGTLLLGIGYMVYVNKSKN---NNDNIHR 57

[Close]
BLAST of Bhi04G000045 vs. NCBI nr
Match: KGN62996.1 (hypothetical protein Csa_2G382690 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 1  MALNDDASRKTTGSVLSQKRNIPFSNTTMAIAGTLLLGIGYMVYVNRSRNNVHNNNNINR 60
          M +ND+ASRKTTG VLS+KRN+PFSNTT+AIAGTLLLGIGYMVYVN+S+N   NN+NI+R
Sbjct: 1  MGVNDEASRKTTGWVLSRKRNLPFSNTTIAIAGTLLLGIGYMVYVNKSKN---NNDNIHR 57

The following BLAST results are available for this feature:
BLAST of Bhi04G000045 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi04G000045 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi04G000045 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LSP0|A0A0A0LSP0_CUCSA6.9e-1576.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382690 PE=4 SV=1[more]
BLAST of Bhi04G000045 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62996.11.0e-1476.67hypothetical protein Csa_2G382690 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000045Bhi04M000045mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi04G000045Csa2G382690Cucumber (Chinese Long) v2cuwgoB156
Bhi04G000045MELO3C011301Melon (DHL92) v3.5.1mewgoB343
Bhi04G000045ClCG08G013720Watermelon (Charleston Gray)wcgwgoB613
Bhi04G000045CSPI02G23940Wild cucumber (PI 183967)cpiwgoB154
Bhi04G000045MELO3C011301.2Melon (DHL92) v3.6.1medwgoB342
Bhi04G000045CsaV3_2G032500Cucumber (Chinese Long) v3cucwgoB163
Bhi04G000045Cla97C08G157160Watermelon (97103) v2wgowmbB314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi04G000045Cucumber (Chinese Long) v3cucwgoB392
Bhi04G000045Cucumber (Chinese Long) v2cuwgoB387
Bhi04G000045Bottle gourd (USVL1VR-Ls)lsiwgoB364
Bhi04G000045Bottle gourd (USVL1VR-Ls)lsiwgoB592
Bhi04G000045Melon (DHL92) v3.5.1mewgoB587
Bhi04G000045Watermelon (Charleston Gray)wcgwgoB458
Bhi04G000045Watermelon (97103) v1wgowmB298
Bhi04G000045Watermelon (97103) v1wgowmB335
Bhi04G000045Silver-seed gourdcarwgoB0173
Bhi04G000045Silver-seed gourdcarwgoB0750
Bhi04G000045Silver-seed gourdcarwgoB1142
Bhi04G000045Wax gourdwgowgoB091
Bhi04G000045Cucumber (Gy14) v1cgywgoB313
Bhi04G000045Cucumber (Gy14) v1cgywgoB548
Bhi04G000045Cucumber (Gy14) v2cgybwgoB151
Bhi04G000045Cucumber (Gy14) v2cgybwgoB369
Bhi04G000045Cucurbita maxima (Rimu)cmawgoB0017
Bhi04G000045Cucurbita maxima (Rimu)cmawgoB0195
Bhi04G000045Cucurbita maxima (Rimu)cmawgoB0945
Bhi04G000045Cucurbita moschata (Rifu)cmowgoB0009
Bhi04G000045Cucurbita moschata (Rifu)cmowgoB0191
Bhi04G000045Cucurbita moschata (Rifu)cmowgoB0945
Bhi04G000045Cucurbita pepo (Zucchini)cpewgoB0142
Bhi04G000045Cucurbita pepo (Zucchini)cpewgoB0980
Bhi04G000045Cucurbita pepo (Zucchini)cpewgoB1029
Bhi04G000045Wild cucumber (PI 183967)cpiwgoB390