Bhi04M000045 (mRNA) Wax gourd

Overview
NameBhi04M000045
TypemRNA
OrganismBenincasa hispida (Wax gourd)
DescriptionUnknown protein
Locationchr4 : 1511688 .. 1511870 (+)
Sequence length183
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGTTCGGTATTAAGCCAAAAGAGAAACATTCCGTTCAGCAACACGACCATGGCTATTGCTGGCACTCTCCTCCTCGGAATCGGCTACATGGTTTATGTCAACAGATCCAGAAATAATGTTCATAATAATAACAATATTAACCGCTAA

mRNA sequence

ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGTTCGGTATTAAGCCAAAAGAGAAACATTCCGTTCAGCAACACGACCATGGCTATTGCTGGCACTCTCCTCCTCGGAATCGGCTACATGGTTTATGTCAACAGATCCAGAAATAATGTTCATAATAATAACAATATTAACCGCTAA

Coding sequence (CDS)

ATGGCATTAAACGACGACGCATCGAGGAAGACAACGGGTTCGGTATTAAGCCAAAAGAGAAACATTCCGTTCAGCAACACGACCATGGCTATTGCTGGCACTCTCCTCCTCGGAATCGGCTACATGGTTTATGTCAACAGATCCAGAAATAATGTTCATAATAATAACAATATTAACCGCTAA

Protein sequence

MALNDDASRKTTGSVLSQKRNIPFSNTTMAIAGTLLLGIGYMVYVNRSRNNVHNNNNINR
Homology
[Close]
BLAST of Bhi04M000045 vs. TrEMBL
Match: tr|A0A0A0LSP0|A0A0A0LSP0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382690 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 6.9e-15
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 1  MALNDDASRKTTGSVLSQKRNIPFSNTTMAIAGTLLLGIGYMVYVNRSRNNVHNNNNINR 60
          M +ND+ASRKTTG VLS+KRN+PFSNTT+AIAGTLLLGIGYMVYVN+S+N   NN+NI+R
Sbjct: 1  MGVNDEASRKTTGWVLSRKRNLPFSNTTIAIAGTLLLGIGYMVYVNKSKN---NNDNIHR 57

[Close]
BLAST of Bhi04M000045 vs. NCBI nr
Match: KGN62996.1 (hypothetical protein Csa_2G382690 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-14
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0 

Query: 1  MALNDDASRKTTGSVLSQKRNIPFSNTTMAIAGTLLLGIGYMVYVNRSRNNVHNNNNINR 60
          M +ND+ASRKTTG VLS+KRN+PFSNTT+AIAGTLLLGIGYMVYVN+S+N   NN+NI+R
Sbjct: 1  MGVNDEASRKTTGWVLSRKRNLPFSNTTIAIAGTLLLGIGYMVYVNKSKN---NNDNIHR 57

The following BLAST results are available for this feature:
BLAST of Bhi04M000045 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Bhi04M000045 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Bhi04M000045 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LSP0|A0A0A0LSP0_CUCSA6.9e-1576.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382690 PE=4 SV=1[more]
BLAST of Bhi04M000045 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62996.11.0e-1476.67hypothetical protein Csa_2G382690 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Bhi04G000045Bhi04G000045gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Bhi04M000045.exon1Bhi04M000045.exon1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
cds.Bhi04M000045cds.Bhi04M000045CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Bhi04M000045Bhi04M000045-proteinpolypeptide