Cla002535 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTTATGGAATCAATAGCTACTTCCCTGTCTTTATTGTTTTTCTGATTATAAATTTTGTGAAGATTAATGTTGTTTGTCAAGAAGTTAAGTTTGATCAGAACTATGTTGTTACTTACGGCCAAGATCATTTCTTCCGGTTAGGAGGTGGAACAGAAGTTCAACTTTCACTTGATCGAGCTTCAGGTTCTTCTCTAAAACTTTTAATTCTCTCATTTTAAAATTAGGTTAGCATTTAGTTATTATAATTTAGTTAGCTAGTCTTCTATCCAAACATCTAACGTAATATAATTATGGGTTAAAATACTATTTTGGTTCTAATACTTTTAAATTTATTCAATTTTAGTCTCCGTACTTTCTCTTAAAATTAGTCTCTACTGTTGATTTTTTTTTTTTTTTAAAGAAAAAGAACTTTTTGTTTTCTATTAGTATTTTTACGAAAAATTTTAAAAGTATATTCACATATTGTATTTATTTACATCAAAATTATTATTATTATTAAATAATTTTAGTAAAAATTCACTTTGACAACTAAATTTACCATTTATTAAAAGTATATTAACTCTAGGTTGAAAAGTGATATTTTAACCCATAACTATTTTACTTTGTAAAATGTTTTTATTGCCAACAGTTACAATTGAGAAAACATGGCAAACAATTCGTGTCAAATTACTAAAAAGAAAGAAAAAAAAAAAAAAAAAAAAACTTTTACTTCCTTTTGATTCCTCAAAAAGTTTCTTATAGTTTGATGGATCATTATTATAGCTAAATGATATGTATTATTTTTGGTTAAACAAATAAAGGAACTGGGTTCAAGTCGAAGATTGGGTATGGTTCAGGATATTTTCACATGAAATTAAAGCTACCTTCCAGACATTCTCCTGGAGTTGTCACAACTTATTATGTAAGATCATTTATTTATTTACTTTTCCAATTCATTTCTTCTTTTGCCTCTTTATATCTGATTATTTAAATGCATGTTTAGATTTTTTTAATTTCTTTTTCTATTTATAAATATAAGAAAATGAACAAAAATTTTTATAAATACAACAAAATTTTACTATCGATCCATATTTATACACTTTTTGAACCACCTTTGCGTAATTAATAATAGGTTAAATTATAATTTAGTCTTTTTAGTTCTTTATAATTTGATAAAATTTCAGTAGGATTATTTGTTAAGTTTCATCAAACCATAAAGATTGAATTCTAATTATAAAATCATAACAACTAAATTCTAACTTTCTCCGAATTACAAGGATCAAATTTGAAATTTACACTTTTTTGAAAAGAAAAAAAAAAAAATCAATGTTTATGTTGGGACCACGATAAGGACATGCAACAATTAAGACCATACATTAGAAATTATTTATGAGGATTTTACTATTTGAACAATAAACAAGTAACAAATAACAAGTGATCAATAGGTATACTTGAATATATCAACTAGGTAATCATCCTCATCATACTCATTTACGAAGATTTTATCAAACGTCAAAAAACTAAATTCTAACTTTTTCGTAACTATATGGACTAAATTTATTATTTAACAAACTAAAATTATATGGAAGAGAGAATATTATTGTGTGATTTGAAATAACTATATGGTACACCATGATGTTTACAGTTACATTCAAGCCCAGACAACAATGGTGGAGTTCATGATGAGGTTGATTTTGAGTTCTTGGGGACAGATGGGCCATTATATATTCTCCAAACAAATGTTTTTGCAGATGACAATGGAGGAAGAGAGCAAAGATTACGTTTATGGTTTGATCCCACCTTAGCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA ATGGGATTTTATGGAATCAATAGCTACTTCCCTGTCTTTATTGTTTTTCTGATTATAAATTTTGTGAAGATTAATGTTGTTTGTCAAGAAGTTAAGTTTGATCAGAACTATGTTGTTACTTACGGCCAAGATCATTTCTTCCGGTTAGGAGGTGGAACAGAAGTTCAACTTTCACTTGATCGAGCTTCAGGAACTGGGTTCAAGTCGAAGATTGGGTATGGTTCAGGATATTTTCACATGAAATTAAAGCTACCTTCCAGACATTCTCCTGGAGTTGTCACAACTTATTATTTACATTCAAGCCCAGACAACAATGGTGGAGTTCATGATGAGGTTGATTTTGAGTTCTTGGGGACAGATGGGCCATTATATATTCTCCAAACAAATGTTTTTGCAGATGACAATGGAGGAAGAGAGCAAAGATTACGTTTATGGTTTGATCCCACCTTAGCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA ATGGGATTTTATGGAATCAATAGCTACTTCCCTGTCTTTATTGTTTTTCTGATTATAAATTTTGTGAAGATTAATGTTGTTTGTCAAGAAGTTAAGTTTGATCAGAACTATGTTGTTACTTACGGCCAAGATCATTTCTTCCGGTTAGGAGGTGGAACAGAAGTTCAACTTTCACTTGATCGAGCTTCAGGAACTGGGTTCAAGTCGAAGATTGGGTATGGTTCAGGATATTTTCACATGAAATTAAAGCTACCTTCCAGACATTCTCCTGGAGTTGTCACAACTTATTATTTACATTCAAGCCCAGACAACAATGGTGGAGTTCATGATGAGGTTGATTTTGAGTTCTTGGGGACAGATGGGCCATTATATATTCTCCAAACAAATGTTTTTGCAGATGACAATGGAGGAAGAGAGCAAAGATTACGTTTATGGTTTGATCCCACCTTAGCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA MGFYGINSYFPVFIVFLIINFVKINVVCQEVKFDQNYVVTYGQDHFFRLGGGTEVQLSLDRASGTGFKSKIGYGSGYFHMKLKLPSRHSPGVVTTYYLHSSPDNNGGVHDEVDFEFLGTDGPLYILQTNVFADDNGGREQRLRLWFDPTLAFHDYAILWNSHQIV
BLAST of Cla002535 vs. Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 3.8e-39 Identity = 80/136 (58.82%), Postives = 96/136 (70.59%), Query Frame = 1
BLAST of Cla002535 vs. Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=3 SV=2) HSP 1 Score: 155.2 bits (391), Expect = 6.1e-37 Identity = 81/159 (50.94%), Postives = 106/159 (66.67%), Query Frame = 1
BLAST of Cla002535 vs. Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 1.3e-34 Identity = 79/162 (48.77%), Postives = 102/162 (62.96%), Query Frame = 1
BLAST of Cla002535 vs. Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 3.1e-33 Identity = 71/136 (52.21%), Postives = 88/136 (64.71%), Query Frame = 1
BLAST of Cla002535 vs. Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 5.4e-33 Identity = 74/137 (54.01%), Postives = 94/137 (68.61%), Query Frame = 1
BLAST of Cla002535 vs. TrEMBL
Match: A0A0A0M3A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662750 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.4e-67 Identity = 126/166 (75.90%), Postives = 144/166 (86.75%), Query Frame = 1
BLAST of Cla002535 vs. TrEMBL
Match: N0DX90_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth30 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 2.7e-60 Identity = 119/170 (70.00%), Postives = 138/170 (81.18%), Query Frame = 1
BLAST of Cla002535 vs. TrEMBL
Match: N0DX41_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth26 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 2.7e-52 Identity = 103/153 (67.32%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of Cla002535 vs. TrEMBL
Match: A0A0A0KXI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308600 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.6e-47 Identity = 99/153 (64.71%), Postives = 118/153 (77.12%), Query Frame = 1
BLAST of Cla002535 vs. TrEMBL
Match: A0A0D2QTI4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G155700 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42 Identity = 80/135 (59.26%), Postives = 100/135 (74.07%), Query Frame = 1
BLAST of Cla002535 vs. NCBI nr
Match: gi|449449697|ref|XP_004142601.1| (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus]) HSP 1 Score: 282.7 bits (722), Expect = 4.1e-73 Identity = 132/166 (79.52%), Postives = 150/166 (90.36%), Query Frame = 1
BLAST of Cla002535 vs. NCBI nr
Match: gi|700211615|gb|KGN66711.1| (hypothetical protein Csa_1G662750 [Cucumis sativus]) HSP 1 Score: 263.8 bits (673), Expect = 1.9e-67 Identity = 126/166 (75.90%), Postives = 144/166 (86.75%), Query Frame = 1
BLAST of Cla002535 vs. NCBI nr
Match: gi|481023344|emb|CCH26640.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]) HSP 1 Score: 239.6 bits (610), Expect = 3.9e-60 Identity = 119/170 (70.00%), Postives = 138/170 (81.18%), Query Frame = 1
BLAST of Cla002535 vs. NCBI nr
Match: gi|481023336|emb|CCH26636.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]) HSP 1 Score: 213.0 bits (541), Expect = 3.9e-52 Identity = 103/153 (67.32%), Postives = 121/153 (79.08%), Query Frame = 1
BLAST of Cla002535 vs. NCBI nr
Match: gi|764529133|ref|XP_004292365.2| (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 209.5 bits (532), Expect = 4.4e-51 Identity = 98/152 (64.47%), Postives = 119/152 (78.29%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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