CsGy1G031520 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G031520
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Putative xyloglucan endotransglucosylase/hydrolase
Location	Chr1 : 30478022 .. 30478893 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTTTATGGAATCAGCAGTACCTACTTCCCTCTCTTCATTGTTGTTGTAATTATAAATTGTTTGAGGAATGAAGTAGTCTGTGAAGAAGCTAATTTTGATCAAAACTATATTGTTACGTACGGCCAGGATCATTTCTTGCGGTCAGAAGGCGGAGCACAAGTTCAACTTTCACTTGATCTAGCTTCAGGTCCTCTGTAATACTTTTAATTTTCTCTCGTTTCAATTAAATTTGGTTTTCATTTTTTACCAATAATAACTCAGTCCACGCCTCAAACGTCCTCTAAATACATTTCTATTGTTTTTTGTTTAACCAAAATGAAGGAACTGGGTTCAAGTCGAAGATTGGATATGGTTCAGGACATTTTCACATAAAACTAAAGCTACCTTCCCGCCATTCTCCTGGAGTAGTCACAACTTATTATGTAAGATTTTTTTAGTTATTTTATTTTCAATCCATTTTTCTTTTTTGCTCTAATTAATTATAAATATATATTATTTTTCAGACAATAGTACATATTATTAAAGAATAGTTGGTACATTAATAATAATAGATAGCAATTGAACTTACCATTTGATGGGGGAGGGGGGACATACATCATATTTATACACTATTTTATTGTGTATTGAAATAAGGAAATACTTGTGTTCTCCATGATGTACAGCTACATTCAAGCCCAGACAAGAATGTTGGAGCTCATGATGAGGTTGATTTTGAGTTCTTGGGCACAGGGCCAGTATACGTTTTGCAAACTAATATTTTTGCAAATGACAATGGAGGTAGAGAGCAAAAAATACGTTTATGGTTTGATCCAAGTTTATCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA

mRNA sequence

ATGGGATTTTATGGAATCAGCAGTACCTACTTCCCTCTCTTCATTGTTGTTGTAATTATAAATTGTTTGAGGAATGAAGTAGTCTGTGAAGAAGCTAATTTTGATCAAAACTATATTGTTACGTACGGCCAGGATCATTTCTTGCGGTCAGAAGGCGGAGCACAAGTTCAACTTTCACTTGATCTAGCTTCAGGAACTGGGTTCAAGTCGAAGATTGGATATGGTTCAGGACATTTTCACATAAAACTAAAGCTACCTTCCCGCCATTCTCCTGGAGTAGTCACAACTTATTATCTACATTCAAGCCCAGACAAGAATGTTGGAGCTCATGATGAGGTTGATTTTGAGTTCTTGGGCACAGGGCCAGTATACGTTTTGCAAACTAATATTTTTGCAAATGACAATGGAGGTAGAGAGCAAAAAATACGTTTATGGTTTGATCCAAGTTTATCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA

Coding sequence (CDS)

ATGGGATTTTATGGAATCAGCAGTACCTACTTCCCTCTCTTCATTGTTGTTGTAATTATAAATTGTTTGAGGAATGAAGTAGTCTGTGAAGAAGCTAATTTTGATCAAAACTATATTGTTACGTACGGCCAGGATCATTTCTTGCGGTCAGAAGGCGGAGCACAAGTTCAACTTTCACTTGATCTAGCTTCAGGAACTGGGTTCAAGTCGAAGATTGGATATGGTTCAGGACATTTTCACATAAAACTAAAGCTACCTTCCCGCCATTCTCCTGGAGTAGTCACAACTTATTATCTACATTCAAGCCCAGACAAGAATGTTGGAGCTCATGATGAGGTTGATTTTGAGTTCTTGGGCACAGGGCCAGTATACGTTTTGCAAACTAATATTTTTGCAAATGACAATGGAGGTAGAGAGCAAAAAATACGTTTATGGTTTGATCCAAGTTTATCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA

Protein sequence

MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSLDLASGTGFKSKIGYGSGHFHIKLKLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV

Homology

[Close]

BLAST of CsGy1G031520 vs. NCBI nr
Match: XP_004142601.1 (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 5.8e-76
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60
           MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL
Sbjct: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60

Query: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT 120
           DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT
Sbjct: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT 120

Query: 121 GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
           GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV
Sbjct: 121 GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 165

[Close]

BLAST of CsGy1G031520 vs. NCBI nr
Match: CCH26640.1 (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 1.9e-74
Identity = 142/167 (85.03%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60
           MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL
Sbjct: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60

Query: 61  D--XXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFL 120
           D                         LPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFL
Sbjct: 61  DLASGPLNWVQVEDWIWFRTFSHKTKLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFL 120

Query: 121 GTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
           GTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV
Sbjct: 121 GTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 167

[Close]

BLAST of CsGy1G031520 vs. NCBI nr
Match: KGN66711.1 (hypothetical protein Csa_1G662750 [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 2.8e-70
Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60
           MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL
Sbjct: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60

Query: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT 120
           DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPG      LHSSPDKNVGAHDEVDFEFLGT
Sbjct: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPG------LHSSPDKNVGAHDEVDFEFLGT 120

Query: 121 GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
           GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV
Sbjct: 121 GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 159

[Close]

BLAST of CsGy1G031520 vs. NCBI nr
Match: XP_022961348.1 (xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita moschata])

HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48
Identity = 98/166 (59.04%), Postives = 120/166 (72.29%), Query Frame = 0


Query: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60
           MG  GI  T+FP  +V++I++CL+N VV EE  FD+NY VTY QDHF+R   G++VQLSL
Sbjct: 1   MGLLGI-ITFFPSLLVLMIMSCLKNRVVGEELTFDENYFVTYSQDHFVRLRDGSEVQLSL 60

Query: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT 120
           D                       LPSR SPGVVTT+YLHS+ D + GAHDE+DFEFLGT
Sbjct: 61  DQASGTCFKSKLEYGSGYFQMKLKLPSRASPGVVTTFYLHSNLDNDSGAHDELDFEFLGT 120

Query: 121 -GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
            GP ++LQTNIFAND GGREQ++RLWFDP+L+FH Y+ILWNSHQIV
Sbjct: 121 EGPEHILQTNIFANDTGGREQRLRLWFDPTLTFHSYSILWNSHQIV 165

[Close]

BLAST of CsGy1G031520 vs. NCBI nr
Match: XP_022987397.1 (xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 3.9e-48
Identity = 97/166 (58.43%), Postives = 121/166 (72.89%), Query Frame = 0


Query: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60
           MGF GI  T+FP  +V++I+  ++N VV EE  FD+NY +TY QDHF+R +GG++VQLSL
Sbjct: 1   MGFLGI-ITFFPPLLVLMIMIRVKNRVVGEELTFDENYFITYSQDHFVRLQGGSEVQLSL 60

Query: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT 120
           D                       LPSR SPGVVTT+YLHS+ D + GAHDE+DFEFLGT
Sbjct: 61  DQASGTCFKSKLEYGSGYFPMKLKLPSRASPGVVTTFYLHSNLDNDTGAHDELDFEFLGT 120

Query: 121 -GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
            GP ++LQTNIFAND GGREQ++RLWFDP+L+FH Y+ILWNSHQIV
Sbjct: 121 EGPEHILQTNIFANDTGGREQRLRLWFDPTLTFHSYSILWNSHQIV 165

[Close]

BLAST of CsGy1G031520 vs. TAIR10
Match: AT4G13090.1 (xyloglucan endotransglucosylase/hydrolase 2)

HSP 1 Score: 129.0 bits (323), Expect = 2.6e-30
Identity = 66/135 (48.89%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 33  NFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPG 92
           +FD NY+VT+GQDH L+   G +VQLS+D                       LP R S G
Sbjct: 31  DFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAG 90

Query: 93  VVTTYYLHSSPDKNVGAHDEVDFEFLGT--GPVYVLQTNIFANDNGGREQKIRLWFDPSL 152
           VVT +YL S  D     HDEVDFEFLG   G    +QTN+F+N  GGREQK   WFDP+ 
Sbjct: 91  VVTAFYLTSKGD----THDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTT 150

Query: 153 SFHDYAILWNSHQIV 166
           SFH Y ILWN +QIV
Sbjct: 151 SFHTYGILWNPYQIV 161

[Close]

BLAST of CsGy1G031520 vs. TAIR10
Match: AT4G13080.1 (xyloglucan endotransglucosylase/hydrolase 1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 62/142 (43.66%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 25  NEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXX 84
           N +   +  FD NY+VT+GQ++ L+   G +VQLSLD                       
Sbjct: 27  NGIDQSKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIK 86

Query: 85  LPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGTGP-VYVLQTNIFANDNGGREQKIR 144
           +P + + GVVT +YL S  +     HDEVDFEFLG       +QTN+F N  G REQK+ 
Sbjct: 87  VPPKDTSGVVTAFYLTSKGN----THDEVDFEFLGNKEGKLAVQTNVFTNGKGNREQKLA 146

Query: 145 LWFDPSLSFHDYAILWNSHQIV 166
           LWFDPS  FH YAILWN +QIV
Sbjct: 147 LWFDPSKDFHTYAILWNPYQIV 164

[Close]

BLAST of CsGy1G031520 vs. TAIR10
Match: AT2G06850.1 (xyloglucan endotransglucosylase/hydrolase 4)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25
Identity = 57/134 (42.54%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 34  FDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGV 93
           F +NY+ T+  DH  +  GG+++QL LD                       LP+  + GV
Sbjct: 35  FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGV 94

Query: 94  VTTYYLHSSPDKNVGAHDEVDFEFLG--TGPVYVLQTNIFANDNGGREQKIRLWFDPSLS 153
           VT +YL S+ ++    HDE+DFEFLG  TG   +LQTN+F    G REQ+I LWFDPS +
Sbjct: 95  VTAFYLSSTNNE----HDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKA 154

Query: 154 FHDYAILWNSHQIV 166
           +H Y+ILWN +QIV
Sbjct: 155 YHTYSILWNMYQIV 164

[Close]

BLAST of CsGy1G031520 vs. TAIR10
Match: AT5G13870.1 (xyloglucan endotransglucosylase/hydrolase 5)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 55/134 (41.04%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 34  FDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGV 93
           F +NY  T+  DH     GG++V L LD                       + +  S G 
Sbjct: 32  FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGT 91

Query: 94  VTTYYLHSSPDKNVGAHDEVDFEFLG--TGPVYVLQTNIFANDNGGREQKIRLWFDPSLS 153
           VT +YL S   +    HDE+DFEFLG  TG  Y+LQTN+F    G REQ+I LWFDPS  
Sbjct: 92  VTAFYLSSQNSE----HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKD 151

Query: 154 FHDYAILWNSHQIV 166
           +H Y++LWN +QIV
Sbjct: 152 YHSYSVLWNMYQIV 161

[Close]

BLAST of CsGy1G031520 vs. TAIR10
Match: AT4G37800.1 (xyloglucan endotransglucosylase/hydrolase 7)

HSP 1 Score: 104.0 bits (258), Expect = 9.1e-23
Identity = 53/145 (36.55%), Postives = 74/145 (51.03%), Query Frame = 0


Query: 23  LRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXX 82
           L   V+   A F+ ++ + +   H  + +GG  +QL LD                     
Sbjct: 23  LYQPVMSRPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMK 82

Query: 83  XXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLG--TGPVYVLQTNIFANDNGGREQ 142
             L    S G VT +Y++S  D      DE+DFEFLG  +G  Y +QTN+FA+  G REQ
Sbjct: 83  IKLIPGDSAGTVTAFYMNSDTD---SVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQ 142

Query: 143 KIRLWFDPSLSFHDYAILWNSHQIV 166
           ++ LWFDPS  FH+YAI WN  +IV
Sbjct: 143 RVNLWFDPSRDFHEYAISWNHLRIV 164

[Close]

BLAST of CsGy1G031520 vs. Swiss-Prot
Match: sp|Q9SV60|XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana OX=3702 GN=XTH2 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.8e-29
Identity = 66/135 (48.89%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 33  NFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPG 92
           +FD NY+VT+GQDH L+   G +VQLS+D                       LP R S G
Sbjct: 31  DFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAG 90

Query: 93  VVTTYYLHSSPDKNVGAHDEVDFEFLGT--GPVYVLQTNIFANDNGGREQKIRLWFDPSL 152
           VVT +YL S  D     HDEVDFEFLG   G    +QTN+F+N  GGREQK   WFDP+ 
Sbjct: 91  VVTAFYLTSKGD----THDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTT 150

Query: 153 SFHDYAILWNSHQIV 166
           SFH Y ILWN +QIV
Sbjct: 151 SFHTYGILWNPYQIV 161

[Close]

BLAST of CsGy1G031520 vs. Swiss-Prot
Match: sp|Q9SV61|XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana OX=3702 GN=XTH1 PE=3 SV=3)

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-26
Identity = 62/142 (43.66%), Postives = 79/142 (55.63%), Query Frame = 0


Query: 25  NEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXX 84
           N +   +  FD NY+VT+GQ++ L+   G +VQLSLD                       
Sbjct: 30  NGIDQSKVGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIK 89

Query: 85  LPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGTGP-VYVLQTNIFANDNGGREQKIR 144
           +P + + GVVT +YL S  +     HDEVDFEFLG       +QTN+F N  G REQK+ 
Sbjct: 90  VPPKDTSGVVTAFYLTSKGN----THDEVDFEFLGNKEGKLAVQTNVFTNGKGNREQKLA 149

Query: 145 LWFDPSLSFHDYAILWNSHQIV 166
           LWFDPS  FH YAILWN +QIV
Sbjct: 150 LWFDPSKDFHTYAILWNPYQIV 167

[Close]

BLAST of CsGy1G031520 vs. Swiss-Prot
Match: sp|Q41542|XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum OX=4565 GN=XTH PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24
Identity = 57/133 (42.86%), Postives = 73/133 (54.89%), Query Frame = 0


Query: 34  FDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGV 93
           FD+NY+ T+ QDH     GG +VQLSLD                       L    S G 
Sbjct: 32  FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGT 91

Query: 94  VTTYYLHSSPDKNVGAHDEVDFEFLG--TGPVYVLQTNIFANDNGGREQKIRLWFDPSLS 153
           VT +YL S   +    HDE+DFEFLG  TG  Y+LQTN+F+   G REQ+I LWFDP+  
Sbjct: 92  VTAFYLSSQNSE----HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKD 151

Query: 154 FHDYAILWNSHQI 165
           +H Y++LWN + I
Sbjct: 152 YHSYSVLWNLYMI 160

[Close]

BLAST of CsGy1G031520 vs. Swiss-Prot
Match: sp|Q39099|XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana OX=3702 GN=XTH4 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.7e-24
Identity = 57/134 (42.54%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 34  FDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGV 93
           F +NY+ T+  DH  +  GG+++QL LD                       LP+  + GV
Sbjct: 35  FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGV 94

Query: 94  VTTYYLHSSPDKNVGAHDEVDFEFLG--TGPVYVLQTNIFANDNGGREQKIRLWFDPSLS 153
           VT +YL S+ ++    HDE+DFEFLG  TG   +LQTN+F    G REQ+I LWFDPS +
Sbjct: 95  VTAFYLSSTNNE----HDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKA 154

Query: 154 FHDYAILWNSHQIV 166
           +H Y+ILWN +QIV
Sbjct: 155 YHTYSILWNMYQIV 164

[Close]

BLAST of CsGy1G031520 vs. Swiss-Prot
Match: sp|Q6YDN9|XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis OX=3715 GN=XET16A PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.5e-24
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 34  FDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGV 93
           F +NY+ T+  DH  +  GG+++QL LD                       LP+  + GV
Sbjct: 34  FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGV 93

Query: 94  VTTYYLHSSPDKNVGAHDEVDFEFLG--TGPVYVLQTNIFANDNGGREQKIRLWFDPSLS 153
           VT +YL S+ ++    HDE+DFEFLG  TG   +LQTN+F    G REQ+I LWFDPS +
Sbjct: 94  VTAFYLSSTNNE----HDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKA 153

Query: 154 FHDYAILWNSHQIV 166
           +H Y++LWN +QIV
Sbjct: 154 YHTYSVLWNLYQIV 163

[Close]

BLAST of CsGy1G031520 vs. TrEMBL
Match: tr|N0DX90|N0DX90_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth30 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-74
Identity = 142/167 (85.03%), Postives = 142/167 (85.03%), Query Frame = 0


Query: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60
           MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL
Sbjct: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60

Query: 61  D--XXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFL 120
           D                         LPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFL
Sbjct: 61  DLASGPLNWVQVEDWIWFRTFSHKTKLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFL 120

Query: 121 GTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
           GTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV
Sbjct: 121 GTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 167

[Close]

BLAST of CsGy1G031520 vs. TrEMBL
Match: tr|A0A0A0M3A1|A0A0A0M3A1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662750 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.9e-70
Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60
           MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL
Sbjct: 1   MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSL 60

Query: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT 120
           DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPG      LHSSPDKNVGAHDEVDFEFLGT
Sbjct: 61  DXXXXXXXXXXXXXXXXXXXXXXXLPSRHSPG------LHSSPDKNVGAHDEVDFEFLGT 120

Query: 121 GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
           GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV
Sbjct: 121 GPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 159

[Close]

BLAST of CsGy1G031520 vs. TrEMBL
Match: tr|N0DX41|N0DX41_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth26 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-38
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = 0


Query: 13  LFIVVVIINCLRNEVVCEE-ANFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXX 72
           L +V+V I+CL+ +VV ++  NFD+NY+VT  QDH LR  GG + QL+LD          
Sbjct: 7   LCLVLVFISCLKKDVVSQKYLNFDKNYVVTSSQDHVLRLNGGTEAQLTLDQAGGGAFQSL 66

Query: 73  XXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT-GPVYVLQTNI 132
                        LPS HSPGVVTT+Y+ S        HDE+DFEFLGT GP Y+LQTN+
Sbjct: 67  LKYGSGYFEMQIKLPSNHSPGVVTTFYVRSHFLTCDNVHDEIDFEFLGTDGPSYILQTNV 126

Query: 133 FANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
           FA+D GGRE+++ LWFDP+L+FHDY ILWNSHQIV
Sbjct: 127 FADDVGGREERLHLWFDPTLAFHDYGILWNSHQIV 161

[Close]

BLAST of CsGy1G031520 vs. TrEMBL
Match: tr|A0A0A0KXI7|A0A0A0KXI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308600 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.7e-34
Identity = 78/155 (50.32%), Postives = 100/155 (64.52%), Query Frame = 0


Query: 13  LFIVVVIINCLRNEVVCEE-ANFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXX 72
           L +V+V I+CL+ +VV ++  NFD+NY+V   QDH LR  GG + QL+LD          
Sbjct: 7   LCLVLVFISCLKKDVVSQKYLNFDKNYVVMSSQDHVLRLNGGTEAQLTLDQAGGGAFQSL 66

Query: 73  XXXXXXXXXXXXXLPSRHSPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT-GPVYVLQTNI 132
                        LPS HSPGV     LHS    +   HDE+DFEFLGT GP Y+LQTN+
Sbjct: 67  LKYGSGYFEMQIKLPSNHSPGV-----LHSDIGSD-NVHDEIDFEFLGTDGPSYILQTNV 126

Query: 133 FANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV 166
           FA+D GGRE+++ LWFDP+L+FH+Y ILWNSHQIV
Sbjct: 127 FADDVGGREERLHLWFDPTLAFHNYGILWNSHQIV 155

[Close]

BLAST of CsGy1G031520 vs. TrEMBL
Match: tr|A0A251TFR3|A0A251TFR3_HELAN (Putative concanavalin A-like lectin/glucanase domain, Xyloglucan endotransglucosylase/hydrolase OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr10g0279411 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-29
Identity = 72/138 (52.17%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 30  EEANFDQNYIVTYGQDHFLRSEGGAQVQLSLDXXXXXXXXXXXXXXXXXXXXXXXLPSRH 89
           + A FDQNY VT+GQ+  L  + G +VQLSLD                       LP + 
Sbjct: 310 KNATFDQNYYVTWGQNRILFFKHGQEVQLSLDQSSGAGFGSRSYYESGFFQMRIKLPDKD 369

Query: 90  SPGVVTTYYLHSSPDKNVGAHDEVDFEFLGT--GPVYVLQTNIFANDNGGREQKIRLWFD 149
           S GVVT +YLHS    NVG HDE+DFEFLG   G   VLQTN+FA+  GGREQ+IRLWFD
Sbjct: 370 SGGVVTAFYLHS----NVGIHDELDFEFLGNRPGKPIVLQTNVFAHGLGGREQRIRLWFD 429

Query: 150 PSLSFHDYAILWNSHQIV 166
           PS  FH Y +LWN HQIV
Sbjct: 430 PSEDFHYYKLLWNQHQIV 443

The following BLAST results are available for this feature:

BLAST of CsGy1G031520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142601.1	5.8e-76	100.00	PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sat...	[more]
CCH26640.1	1.9e-74	85.03	putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]	[more]
KGN66711.1	2.8e-70	96.36	hypothetical protein Csa_1G662750 [Cucumis sativus]	[more]
XP_022961348.1	1.4e-48	59.04	xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita moschata]	[more]
XP_022987397.1	3.9e-48	58.43	xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita maxima]	[more]

BLAST of CsGy1G031520 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G13090.1	2.6e-30	48.89	xyloglucan endotransglucosylase/hydrolase 2	[more]
AT4G13080.1	1.2e-27	43.66	xyloglucan endotransglucosylase/hydrolase 1	[more]
AT2G06850.1	1.5e-25	42.54	xyloglucan endotransglucosylase/hydrolase 4	[more]
AT5G13870.1	2.8e-24	41.04	xyloglucan endotransglucosylase/hydrolase 5	[more]
AT4G37800.1	9.1e-23	36.55	xyloglucan endotransglucosylase/hydrolase 7	[more]

BLAST of CsGy1G031520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SV60\|XTH2_ARATH	4.8e-29	48.89	Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q9SV61\|XTH1_ARATH	2.2e-26	43.66	Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thal...	[more]
sp\|Q41542\|XTH_WHEAT	1.6e-24	42.86	Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum OX=4565 ...	[more]
sp\|Q39099\|XTH4_ARATH	2.7e-24	42.54	Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana OX=3...	[more]
sp\|Q6YDN9\|XTH_BRAOB	3.5e-24	41.79	Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis OX=...	[more]

BLAST of CsGy1G031520 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|N0DX90\|N0DX90_CUCSA	1.2e-74	85.03	Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN...	[more]
tr\|A0A0A0M3A1\|A0A0A0M3A1_CUCSA	1.9e-70	96.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662750 PE=4 SV=1	[more]
tr\|N0DX41\|N0DX41_CUCSA	1.1e-38	52.90	Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN...	[more]
tr\|A0A0A0KXI7\|A0A0A0KXI7_CUCSA	3.7e-34	50.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308600 PE=4 SV=1	[more]
tr\|A0A251TFR3\|A0A251TFR3_HELAN	1.6e-29	52.17	Putative concanavalin A-like lectin/glucanase domain, Xyloglucan endotransglucos...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR013320	ConA-like_dom_sf
IPR000757	GH16

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042546	cell wall biogenesis
biological_process	GO:0010411	xyloglucan metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G031520.1	CsGy1G031520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.60.120.200		coord: 20..165 e-value: 3.2E-35 score: 123.8
None	No IPR available	PANTHER	PTHR31062	FAMILY NOT NAMED	coord: 9..165
None	No IPR available	PANTHER	PTHR31062:SF43	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 2-RELATED	coord: 9..165
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 35..164 e-value: 6.7E-29 score: 100.5
IPR000757	Glycoside hydrolase family 16	PROSITE	PS51762	GH16_2	coord: 4..165 score: 15.475
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	SSF49899	Concanavalin A-like lectins/glucanases	coord: 34..165

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G031520	Cla002535	Watermelon (97103) v1	cgybwmB013
CsGy1G031520	Csa1G662750	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G031520	ClCG03G011190	Watermelon (Charleston Gray)	cgybwcgB036
CsGy1G031520	CSPI01G32700	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G031520	CmaCh10G008120	Cucurbita maxima (Rimu)	cgybcmaB013
CsGy1G031520	CmoCh10G008430	Cucurbita moschata (Rifu)	cgybcmoB013
CsGy1G031520	Lsi06G007290	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G031520	Cp4.1LG18g02650	Cucurbita pepo (Zucchini)	cgybcpeB039
CsGy1G031520	CsaV3_1G044870	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G031520	Cla97C03G061640	Watermelon (97103) v2	cgybwmbB035

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G031520	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G031520	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G031520	Melon (DHL92) v3.5.1	cgybmeB040
CsGy1G031520	Melon (DHL92) v3.6.1	cgybmedB034
CsGy1G031520	Silver-seed gourd	carcgybB0899