Csa1G662750 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTTATGGAATCAGCAGTACCTACTTCCCTCTCTTCATTGTTGTTGTAATTATAAATTGTTTGAGGAATGAAGTAGTCTGTGAAGAAGCTAATTTTGATCAAAACTATATTGTTACGTACGGCCAGGATCATTTCTTGCGGTCAGAAGGCGGAGCACAAGTTCAACTTTCACTTGATCTAGCTTCAGGTCCTCTGTAATACTTTTAATTTTCTCTCGTTTCAATTAAATTTGGTTTTCATTTTTTACCAATAATAACTCAGTCCACGCCTCAAACGTCCTCTAAATACATTTCTATTGTTTTTTGTTTAACCAAAATGAAGGAACTGGGTTCAAGTCGAAGATTGGATATGGTTCAGGACATTTTCACATAAAACTAAAGCTACCTTCCCGCCATTCTCCTGGAGTAGTCACAACTTATTATGTAAGATTTTTTTAGTTATTTTATTTTCAATCCATTTTTCTTTTTTGCTCTAATTAATTATAAATATATATTATTTTTCAGACAATAGTACATATTATTAAAGAATAGTTGGTACATTAATAATAATAGATAGCAATTGAACTTACCATTTGATGGGGGAGGGGGGACATACATCATATTTATACACTATTTTATTGTGTATTGAAATAAGGAAATACTTGTGTTCTCCATGATGTACAGCTACATTCAAGCCCAGACAAGAATGTTGGAGCTCATGATGAGGTTGATTTTGAGTTCTTGGGCACAGGGCCAGTATACGTTTTGCAAACTAATATTTTTGCAAATGACAATGGAGGTAGAGAGCAAAAAATACGTTTATGGTTTGATCCAAGTTTATCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA ATGGGATTTTATGGAATCAGCAGTACCTACTTCCCTCTCTTCATTGTTGTTGTAATTATAAATTGTTTGAGGAATGAAGTAGTCTGTGAAGAAGCTAATTTTGATCAAAACTATATTGTTACGTACGGCCAGGATCATTTCTTGCGGTCAGAAGGCGGAGCACAAGTTCAACTTTCACTTGATCTAGCTTCAGGAACTGGGTTCAAGTCGAAGATTGGATATGGTTCAGGACATTTTCACATAAAACTAAAGCTACCTTCCCGCCATTCTCCTGGACTACATTCAAGCCCAGACAAGAATGTTGGAGCTCATGATGAGGTTGATTTTGAGTTCTTGGGCACAGGGCCAGTATACGTTTTGCAAACTAATATTTTTGCAAATGACAATGGAGGTAGAGAGCAAAAAATACGTTTATGGTTTGATCCAAGTTTATCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA ATGGGATTTTATGGAATCAGCAGTACCTACTTCCCTCTCTTCATTGTTGTTGTAATTATAAATTGTTTGAGGAATGAAGTAGTCTGTGAAGAAGCTAATTTTGATCAAAACTATATTGTTACGTACGGCCAGGATCATTTCTTGCGGTCAGAAGGCGGAGCACAAGTTCAACTTTCACTTGATCTAGCTTCAGGAACTGGGTTCAAGTCGAAGATTGGATATGGTTCAGGACATTTTCACATAAAACTAAAGCTACCTTCCCGCCATTCTCCTGGACTACATTCAAGCCCAGACAAGAATGTTGGAGCTCATGATGAGGTTGATTTTGAGTTCTTGGGCACAGGGCCAGTATACGTTTTGCAAACTAATATTTTTGCAAATGACAATGGAGGTAGAGAGCAAAAAATACGTTTATGGTTTGATCCAAGTTTATCATTTCATGACTATGCAATTCTTTGGAATTCCCATCAAATTGTGTAA MGFYGISSTYFPLFIVVVIINCLRNEVVCEEANFDQNYIVTYGQDHFLRSEGGAQVQLSLDLASGTGFKSKIGYGSGHFHIKLKLPSRHSPGLHSSPDKNVGAHDEVDFEFLGTGPVYVLQTNIFANDNGGREQKIRLWFDPSLSFHDYAILWNSHQIV*
BLAST of Csa1G662750 vs. Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.0e-33 Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1
BLAST of Csa1G662750 vs. Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=3 SV=2) HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30 Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 1
BLAST of Csa1G662750 vs. Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.0e-28 Identity = 61/129 (47.29%), Postives = 81/129 (62.79%), Query Frame = 1
BLAST of Csa1G662750 vs. Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 8.6e-28 Identity = 61/130 (46.92%), Postives = 82/130 (63.08%), Query Frame = 1
BLAST of Csa1G662750 vs. Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.1e-27 Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 1
BLAST of Csa1G662750 vs. TrEMBL
Match: A0A0A0M3A1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662750 PE=4 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 1.4e-88 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Csa1G662750 vs. TrEMBL
Match: N0DX90_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth30 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 1.8e-72 Identity = 144/169 (85.21%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of Csa1G662750 vs. TrEMBL
Match: A0A0A0KXI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308600 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 5.0e-43 Identity = 85/149 (57.05%), Postives = 114/149 (76.51%), Query Frame = 1
BLAST of Csa1G662750 vs. TrEMBL
Match: N0DX41_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth26 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42 Identity = 89/157 (56.69%), Postives = 116/157 (73.89%), Query Frame = 1
BLAST of Csa1G662750 vs. TrEMBL
Match: L7UWF6_GOSHI (Xyloglucan endotransglucosylase OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 8.6e-35 Identity = 76/152 (50.00%), Postives = 96/152 (63.16%), Query Frame = 1
BLAST of Csa1G662750 vs. TAIR10
Match: AT4G13090.1 (AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 2) HSP 1 Score: 144.4 bits (363), Expect = 5.9e-35 Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 1
BLAST of Csa1G662750 vs. TAIR10
Match: AT4G13080.1 (AT4G13080.1 xyloglucan endotransglucosylase/hydrolase 1) HSP 1 Score: 134.4 bits (337), Expect = 6.1e-32 Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 1
BLAST of Csa1G662750 vs. TAIR10
Match: AT3G25050.1 (AT3G25050.1 xyloglucan endotransglucosylase/hydrolase 3) HSP 1 Score: 124.8 bits (312), Expect = 4.8e-29 Identity = 61/130 (46.92%), Postives = 82/130 (63.08%), Query Frame = 1
BLAST of Csa1G662750 vs. TAIR10
Match: AT2G06850.1 (AT2G06850.1 xyloglucan endotransglucosylase/hydrolase 4) HSP 1 Score: 124.4 bits (311), Expect = 6.3e-29 Identity = 62/130 (47.69%), Postives = 84/130 (64.62%), Query Frame = 1
BLAST of Csa1G662750 vs. TAIR10
Match: AT5G13870.1 (AT5G13870.1 xyloglucan endotransglucosylase/hydrolase 5) HSP 1 Score: 121.7 bits (304), Expect = 4.1e-28 Identity = 61/130 (46.92%), Postives = 79/130 (60.77%), Query Frame = 1
BLAST of Csa1G662750 vs. NCBI nr
Match: gi|700211615|gb|KGN66711.1| (hypothetical protein Csa_1G662750 [Cucumis sativus]) HSP 1 Score: 333.6 bits (854), Expect = 1.9e-88 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
BLAST of Csa1G662750 vs. NCBI nr
Match: gi|449449697|ref|XP_004142601.1| (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 1.8e-86 Identity = 159/165 (96.36%), Postives = 159/165 (96.36%), Query Frame = 1
BLAST of Csa1G662750 vs. NCBI nr
Match: gi|481023344|emb|CCH26640.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]) HSP 1 Score: 280.0 bits (715), Expect = 2.5e-72 Identity = 144/169 (85.21%), Postives = 147/169 (86.98%), Query Frame = 1
BLAST of Csa1G662750 vs. NCBI nr
Match: gi|700199212|gb|KGN54370.1| (hypothetical protein Csa_4G308600 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 7.2e-43 Identity = 85/149 (57.05%), Postives = 114/149 (76.51%), Query Frame = 1
BLAST of Csa1G662750 vs. NCBI nr
Match: gi|481023336|emb|CCH26636.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]) HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42 Identity = 89/157 (56.69%), Postives = 116/157 (73.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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