Cla002516 (gene) Watermelon (97103) v1

Overview
NameCla002516
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionHeat stress transcription factor (AHRD V1 ***- D4QAU8_CARPA); contains Interpro domain(s) IPR000232 Heat shock factor (HSF)-type, DNA-binding
LocationChr4 : 11546004 .. 11549086 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCTGGAGTGAGCAATAATAATAAAAATGATCAGAAGGGGTTGCCGTCGTGGCCGCCACGGACGGCAGAGAGTGAGATTATTATGAGAAAGAAGTCAACGGCGCCACCTTTTCTGTTGAAGACTTACACGGTGGTGGAGGATCCGGCGACGGACGAGGTGATATCGTGGAACGACGACGGGACAGCGTTTGTGGTTTGGCAGACGGTGGAGTTTGCTAAAGATGTTTTGCCGAAGCTGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGTCAACTTAATACCTATGTACGTTTTTCTTCTTTCTTTTCTGTTTCTTATTTACACATGTTTTTCTCAGAAAAAAAAAAAAAAACTTATTTCACACATATACTTTTTTTTTTTTCAAAATCACAAATATGCTGTGGAGATTTGAAGTCGGATCGGTTAGAATAACAAGAGTAAAATGAAGAAAAAAGGAAAAGTTATACAAGTTTTTCACTTTTTATCTTTACGCTTCAAATTCTCAAAATTTAAAGATTATATAATGTAAGATTGGGTAAATTTGACATTTCACATTAAAATTTTCAATGGTAAGTTAATTAAACTTAGGTTGTGTCTAATAAATCCCTCCTTATTGACACATCTATATTTTTACTGTTAGTATAGATGTTCATTACTGATGGAGCTTCGAACCGTCAAAAAAGTTTTTTTTTTGCCGATGAATTTTTACGGTGTTGGCATAAGTAAATTAAATTTTGTTAAGTGAAAGTTGAACTAATTGGTTTGGAATATAGAAAAGCAAATACATCCATGAATACAGACACAAAAAAATTTACAAATCCTATTAAAGAAAAGACATAAGATGTGTTTAAAAAAGAAAAAAAAATGGAAAAAAAGAACACCTAAGAGGTGAATCCCAACTCACACTTTTGTGTCTAATTGAGTCTATTAAAATGAATTTCTAAAAAGAAAGTATAGGAATTCAGTAGACACAAATTAGAAGATTAAAAAAGAACCTATTGTACTTTATTCTGGGTTTGCTCCTTAATTTGGCACTCCAAAATTTCAAGAAAGATTCTACATAAACAAAAGTTATAACAAAAAAATTAGTATAAATTACCACCCATTTGTTTAAATTTTAGTACTATATGCAAATTGAATAAATGATACTCTTTTTAAAATTCAATCTCATTTGAAAATGCAAGAAAGAAAATAAGGAAGAATACAAAAACCCAACTCACTCTTCGTTTTCATTTATTTATTTAATTTTCCATTTTTTTTTAAAGTAAAAACATAACAAAACCTAAACCCCTCTTCCAAAATTGTATAAAAAACCTCGTCATTATTATTTTTTTCATTGTATTTTTTAAACAAAAGTATAAACAGGTAAATATATATATTTTTTTAAAAAACTTGTATATGTATTATCAAAATAGAGTAGCATAATATTTAATAATTATTAGTCTTTAGAGTAAATTAATACTTCTTGTTATGTTCAAAATAAATTGAGATTTTTTTTTTCTTATCTTTGATTTTGACCTAATTATAAATTGAGATTTTTGAGTCTTCGAGTGAGATTTTGACATCTACATTTTTAGTTTACTAATTAAGTTTGATTATTTGCATTCATGTTTCAGACCCAAGAAAAGGTTTTAAGTTGTACTTGTCTAACCTAACTTGATTTGAATTTGCATCATAAAGAAGTTTACTGTATTTGACATCTTGTTTTATTAATTTTCACAAATAAAATAATTAATCATATTTGTTGGCTTATGGGCATATTAATTAAGCATACTCATTTAATTTTGTACTTTTTTTTCTTTTGTTAATGAAATTATTTTCAATAACGATATAAATGGTCTATTCTTCCTTCTTTATGCATCTTTGTCAAGTTCAACTTTTTTAGATGTCCTTTCTTCTTGCTAATTATCATTGAATTTTTAAAAGTCTAATTTTGTTTACTTGTACAATCTTGTTGTAATAGAATCTACAACATTTCAAACAAAATATACTTTTTTTTTTCTCCCAAAAACTTGTTGAAAATTATTTTGAACCTCTCAATACATTTCAATGTGGATGTTTATTGAGACCCGTTGCTAACTCTCTAGTGTATGTTTCTTTGAATGACTAGTTCTTGTCTCCACAAAACATTTCCCCAAACATAGGAAGACAATTCTTCCAAGTGAGAAATTATTCAATGAGATCGTTACAATATGACTGTCTTCTAATAGTTGTAGGATGTGGATTTGAAAATTTGCATGCCCATACTAATAAAACCATTAGTGTTTTGAGATACTACTCTTTCATACATCAAATAGTGCACTAATAGTCACGTCTTGACAACCTTCTCAAATAATAATCTCCTTCCTATTTAGGTTGATATACTCAGGAGGATAGTACTTGAGCTTGAATGTTCTTGCAAGCAAGCATGGTTGGTTATATAAAATCTGTCCAGCTGTTCTCTTTAGATCCTTGAGCAACCATAATTGAGGAACATACCAAGCAACTAAGATTTAAAATACATTTCTAGAATTTGGAAATTGAACAACTAGGCATAAATCTTATTGATTCAAAATAGATATTCAATTCCTTTTTTTAAACAAATCTTTAAGTAGGTCAATCCTTTTCTCAAGTTATAATTTTCGTTGTTCGTTTTATTGAAGGGATTCCGAAAGGTGACGACAACAAGGTGGGAGTTTTGCAACGACAAATTTCAAAAGGGTGAAAAGGAAAAGCTCTGCGAAATACGAAGAAGAAAGACATGGACCAACAAGCAACAACATGAGATTGATGAAGATCAAAGATCCTCCTCTTCGAACTCATCATCTTCACAATACAATACTCTAATGGATGAGAACAAGAGGTTGAAGAAGGAAAATGGAGCCTTAAGCTCAGAGCTTGTAAGCATGAAAAACAAGTGTAGAGAGCTTTTTGATTTGGTGGCTAAGTATGAAAATATTTCAAAGAAAGAAGAGGAAGATGAGAGGCCAAAGCTGTTTGGAGTAAGGTTGGAAGAAGGGGAGAGAGAGAGGAAGAGAAAAAGGGCAGAAGAGATTAGTGAAACTGCAACTTTTTTACTATCTCAATCATGCAAATGA

mRNA sequence

ATGGAAGCTGGAGTGAGCAATAATAATAAAAATGATCAGAAGGGGTTGCCGTCGTGGCCGCCACGGACGGCAGAGAGTGAGATTATTATGAGAAAGAAGTCAACGGCGCCACCTTTTCTGTTGAAGACTTACACGGTGGTGGAGGATCCGGCGACGGACGAGGTGATATCGTGGAACGACGACGGGACAGCGTTTGTGGTTTGGCAGACGGTGGAGTTTGCTAAAGATGTTTTGCCGAAGCTGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGTCAACTTAATACCTATGGATTCCGAAAGGTGACGACAACAAGGTGGGAGTTTTGCAACGACAAATTTCAAAAGGGTGAAAAGGAAAAGCTCTGCGAAATACGAAGAAGAAAGACATGGACCAACAAGCAACAACATGAGATTGATGAAGATCAAAGATCCTCCTCTTCGAACTCATCATCTTCACAATACAATACTCTAATGGATGAGAACAAGAGGTTGAAGAAGGAAAATGGAGCCTTAAGCTCAGAGCTTGTAAGCATGAAAAACAAGTGTAGAGAGCTTTTTGATTTGGTGGCTAAGTATGAAAATATTTCAAAGAAAGAAGAGGAAGATGAGAGGCCAAAGCTGTTTGGAGTAAGGTTGGAAGAAGGGGAGAGAGAGAGGAAGAGAAAAAGGGCAGAAGAGATTAGTGAAACTGCAACTTTTTTACTATCTCAATCATGCAAATGA

Coding sequence (CDS)

ATGGAAGCTGGAGTGAGCAATAATAATAAAAATGATCAGAAGGGGTTGCCGTCGTGGCCGCCACGGACGGCAGAGAGTGAGATTATTATGAGAAAGAAGTCAACGGCGCCACCTTTTCTGTTGAAGACTTACACGGTGGTGGAGGATCCGGCGACGGACGAGGTGATATCGTGGAACGACGACGGGACAGCGTTTGTGGTTTGGCAGACGGTGGAGTTTGCTAAAGATGTTTTGCCGAAGCTGTTTAAGCATTGCAATTTCTCTAGCTTTGTTCGTCAACTTAATACCTATGGATTCCGAAAGGTGACGACAACAAGGTGGGAGTTTTGCAACGACAAATTTCAAAAGGGTGAAAAGGAAAAGCTCTGCGAAATACGAAGAAGAAAGACATGGACCAACAAGCAACAACATGAGATTGATGAAGATCAAAGATCCTCCTCTTCGAACTCATCATCTTCACAATACAATACTCTAATGGATGAGAACAAGAGGTTGAAGAAGGAAAATGGAGCCTTAAGCTCAGAGCTTGTAAGCATGAAAAACAAGTGTAGAGAGCTTTTTGATTTGGTGGCTAAGTATGAAAATATTTCAAAGAAAGAAGAGGAAGATGAGAGGCCAAAGCTGTTTGGAGTAAGGTTGGAAGAAGGGGAGAGAGAGAGGAAGAGAAAAAGGGCAGAAGAGATTAGTGAAACTGCAACTTTTTTACTATCTCAATCATGCAAATGA

Protein sequence

MEAGVSNNNKNDQKGLPSWPPRTAESEIIMRKKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTNKQQHEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVSMKNKCRELFDLVAKYENISKKEEEDERPKLFGVRLEEGERERKRKRAEEISETATFLLSQSCK
Homology
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BLAST of Cla002516 vs. Swiss-Prot
Match: HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-54
Identity = 124/242 (51.24%), Postives = 150/242 (61.98%), Query Frame = 1 

Query: 7   NNNKNDQKGLPSWPPRTAESEIIMRKKSTA-----PPFLLKTYTVVEDPATDEVISWNDD 66
           N+N ND++ LP          +I    STA     PPFL+KTY VVEDP TD VISWN+ 
Sbjct: 11  NDNVNDEERLPL-------EFMIGNSTSTAELQPPPPFLVKTYKVVEDPTTDGVISWNEY 70

Query: 67  GTAFVVWQTVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGEKEK 126
           GT FVVWQ  EFA+D+LP LFKHCNFSSFVRQLNTYGFRKVTT RWEF N+ F+KG++E 
Sbjct: 71  GTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFRKGQREL 130

Query: 127 LCEIRRRKT--WT-NKQQHEI--------------------DEDQRSSSSNSSSSQYNTL 186
           +  IRRRK+  W+ NK  H++                     EDQ+SS++ SSS  Y  L
Sbjct: 131 MSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQRIGIDHHHEDQQSSAT-SSSFVYTAL 190

Query: 187 MDENKRLKKENGALSSELVSMKNKCRELFDLVAKYENISK------KEEEDERPKLFGVR 215
           +DENK LK EN  LS EL   K KC++L +LV +Y    +       +EEDE  KLFGV+
Sbjct: 191 LDENKCLKNENELLSCELGKTKKKCKQLMELVERYRGEDEDATDESDDEEDEGLKLFGVK 244

[Close]
BLAST of Cla002516 vs. Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.4e-44
Identity = 95/194 (48.97%), Postives = 120/194 (61.86%), Query Frame = 1 

Query: 30  MRKKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSS 89
           M +++   PFLLKTY +V+D ATD+VISWN+ GT FVVW+T EFAKD+LPK FKH NFSS
Sbjct: 1   MSQRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSS 60

Query: 90  FVRQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTN------------KQQH 149
           FVRQLNTYGFRK+   +WEF N+ F++G+KE L  IRRRKT T+                
Sbjct: 61  FVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTSTPAGGKSVAAGASASP 120

Query: 150 EIDEDQRSSSSNSSS--------------SQYNTLMDENKRLKKENGALSSELVSMKNKC 198
           +   D   SSS SS               SQ+  L DEN++LKK+N  LSSELV  K +C
Sbjct: 121 DNSGDDIGSSSTSSPDSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQC 180

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BLAST of Cla002516 vs. Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39
Identity = 95/224 (42.41%), Postives = 122/224 (54.46%), Query Frame = 1 

Query: 15  GLPSWPPRTAESEI----IMRKKSTAP-PFLLKTYTVVEDPATDEVISWNDDGTAFVVWQ 74
           G PS PP    +E     + +++ T P PFL KTY +V+DPA D+VISWNDDG+ FVVW+
Sbjct: 20  GEPSPPPPAPAAEAAGVGVGQQQRTVPTPFLTKTYQLVDDPAVDDVISWNDDGSTFVVWR 79

Query: 75  TVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRK 134
             EFA+D+LPK FKH NFSSFVRQLNTYGFRK+   RWEF ND F++GE+  LCEI RRK
Sbjct: 80  PAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGERRLLCEIHRRK 139

Query: 135 -----------------------TWTNKQQHEIDEDQRSSSSNSSSSQYNTLM------- 194
                                  T T      +  +++  SS+SS      L        
Sbjct: 140 VTPPAPAATTAAVAAAIPMALPVTTTRDGSPVLSGEEQVISSSSSPEPPLVLPQAPSGSG 199

[Close]
BLAST of Cla002516 vs. Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-39
Identity = 97/226 (42.92%), Postives = 125/226 (55.31%), Query Frame = 1 

Query: 37  PPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFVRQLNT 96
           PPFL KTY +VEDP+TDE ISWND GTAFVVW+  EFA+D+LPK FKH NFSSFVRQLNT
Sbjct: 9   PPFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNT 68

Query: 97  YGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRK-------------------------TW 156
           YGF+KV   RWEF ND F++GEK  L  I+RRK                         T 
Sbjct: 69  YGFKKVVADRWEFANDCFRRGEKHLLGGIQRRKGSGTGGAGAAPAGGIPTAIPISSPPTS 128

Query: 157 TNKQQHEIDEDQRSSSSNSS--SSQYNTLMDENKRLKKENGALSSELVSMKNKCRELFDL 216
           +  +        R ++  ++  S     L +EN RL++EN  L+ EL   +  C  +  L
Sbjct: 129 SGGEPAVSSSPPRGAAGIAAGVSGAVAELEEENARLRRENARLARELARARRVCDGVRRL 188

Query: 217 VAKYENISKKEEE-----DERPKLFGVRLEEGERERKRKRAEEISE 231
           V++Y++     EE     D +P LFGV +  G+R R+    +E  E
Sbjct: 189 VSRYDHDHGGGEEEAGEGDVKPMLFGVAI-GGKRSREENGEDEEEE 233

[Close]
BLAST of Cla002516 vs. Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.2e-38
Identity = 97/268 (36.19%), Postives = 138/268 (51.49%), Query Frame = 1 

Query: 32  KKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFV 91
           ++S   PFL KT+ +VED + D+VISWN+DG++F+VW   +FAKD+LPK FKH NFSSFV
Sbjct: 17  QRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFV 76

Query: 92  RQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTNKQQ--------------- 151
           RQLNTYGF+KV   RWEF ND F++GEK  L EI+RRK  T  Q                
Sbjct: 77  RQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKITTTHQTVVAPSSEQRNQTMVV 136

Query: 152 ------HEIDEDQRSSSSNSSSSQYNT-----------LMDENKRLKKENGALSSELVSM 211
                  + + +Q  SSS SS   + T           L++EN++L+ +N  L+ EL  M
Sbjct: 137 SPSNSGEDNNNNQVMSSSPSSWYCHQTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQM 196

Query: 212 KNKCRELFDLVAKY----------------------------ENISKKEEEDERPKLFGV 240
           K+ C  ++ L++ Y                              +  +EEE+  P+LFGV
Sbjct: 197 KSICDNIYSLMSNYVGSQPTDRSYSPGGSSSQPMEFLPAKRFSEMEIEEEEEASPRLFGV 256

[Close]
BLAST of Cla002516 vs. TrEMBL
Match: B9II85_POPTR (Heat Stress Transcription Factor family protein OS=Populus trichocarpa GN=POPTR_0016s05680g PE=3 SV=2)

HSP 1 Score: 315.1 bits (806), Expect = 7.5e-83
Identity = 161/219 (73.52%), Postives = 185/219 (84.47%), Query Frame = 1 

Query: 32  KKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFV 91
           +KST PPFLLKTY +VEDPATDEVISWN++GT FVVWQ  EFA+D+LP LFKH NFSSFV
Sbjct: 12  RKSTPPPFLLKTYMLVEDPATDEVISWNEEGTGFVVWQPAEFARDLLPTLFKHSNFSSFV 71

Query: 92  RQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTNKQQ---------HEIDED 151
           RQLNTYGFRKV T+RWEFCND F+KGE+E LC+IRRRK W++KQQ          E +ED
Sbjct: 72  RQLNTYGFRKVATSRWEFCNDMFRKGERELLCQIRRRKAWSSKQQPIAPIQVTTQEFEED 131

Query: 152 QRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVSMKNKCRELFDLVAKYENISKKEEE 211
           QRSSS+ SSSS+Y TL+DENKRLKKENG LS+EL SM  KC+EL DLVAKY ++ +KEEE
Sbjct: 132 QRSSST-SSSSEYTTLVDENKRLKKENGVLSTELTSMNRKCKELLDLVAKYAHL-EKEEE 191

Query: 212 DERPKLFGVRLE-EGERERKRKRAEEISETATFLLSQSC 241
           DERPKLFGVRLE EG+RERKRKRA EISE+A+ LLSQSC
Sbjct: 192 DERPKLFGVRLEAEGDRERKRKRA-EISESASILLSQSC 227

[Close]
BLAST of Cla002516 vs. TrEMBL
Match: A0A067K1D9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21103 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.9e-82
Identity = 167/248 (67.34%), Postives = 186/248 (75.00%), Query Frame = 1 

Query: 6   SNNNKNDQKGLPSWPPRTAESEIIMRKKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAF 65
           +NN+ N+ K L          E    +KST PPFLLKTY +VEDPATD V+SWNDDGT F
Sbjct: 7   NNNHNNNNKAL----------EYQYVRKSTPPPFLLKTYMLVEDPATDHVVSWNDDGTGF 66

Query: 66  VVWQTVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEI 125
           +VWQ  EFA+D+LP LFKH NFSSFVRQLNTYGFRKV T+RWEFCND F+KGEKE LC+I
Sbjct: 67  IVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNDMFRKGEKELLCQI 126

Query: 126 RRRKTWTNKQQ---------HEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSEL 185
           RRRK W+NKQQ          E DEDQRSSS+ SSSS+Y  L+DENKRLKKEN  LSSEL
Sbjct: 127 RRRKAWSNKQQPNAQIQTTPQESDEDQRSSST-SSSSEYGVLVDENKRLKKENKVLSSEL 186

Query: 186 VSMKNKCRELFDLVAKYENISKKEEEDE--RPKLFGVRLE-EGERERKRKRAEEISETAT 242
             MK KC+EL DLVAKY    K+EEE+E   PKLFGVRLE  GERERKRKRA EI E AT
Sbjct: 187 TDMKRKCKELLDLVAKYTRFEKEEEEEEDASPKLFGVRLEVAGERERKRKRA-EIRECAT 242

[Close]
BLAST of Cla002516 vs. TrEMBL
Match: A0A0U3SRJ2_VITPS (Transcription factor HsfB3a OS=Vitis pseudoreticulata PE=2 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 160/226 (70.80%), Postives = 182/226 (80.53%), Query Frame = 1 

Query: 32  KKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFV 91
           +KST PPFLLKTY +VEDPATD VISWN DGTAFVVWQ  EFA+D+LP LFKH NFSSFV
Sbjct: 16  RKSTPPPFLLKTYMLVEDPATDGVISWNSDGTAFVVWQPAEFARDLLPTLFKHSNFSSFV 75

Query: 92  RQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTNKQQ--------------- 151
           RQLNTYGFRKV T+RWEFCND F++GE+E LCEIRRRK WT +QQ               
Sbjct: 76  RQLNTYGFRKVATSRWEFCNDMFRRGERELLCEIRRRKAWTKQQQQQQQAVGGPADQNGV 135

Query: 152 HEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVSMKNKCRELFDLVAKYENI 211
            E++ED RSSS+ SSSS Y++L+DENKRLKKENG L SEL SMKNKC+EL DLVA +   
Sbjct: 136 QELEEDLRSSST-SSSSGYSSLVDENKRLKKENGVLCSELTSMKNKCKELLDLVAMHAGA 195

Query: 212 SKKEEEDERPKLFGVRLE-EGERERKRKRAEEISETATFLLSQSCK 242
            K+EE+DERPKLFGVRLE +G+RERKRKRA EISETA+ LLSQSCK
Sbjct: 196 EKEEEDDERPKLFGVRLEVQGDRERKRKRA-EISETASILLSQSCK 239

[Close]
BLAST of Cla002516 vs. TrEMBL
Match: F6HKV6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08750 PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.8e-81
Identity = 160/229 (69.87%), Postives = 183/229 (79.91%), Query Frame = 1 

Query: 32  KKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFV 91
           +KST PPFLLKTY +VEDPATD VISWN DGTAFVVWQ  EFA+D+LP LFKH NFSSFV
Sbjct: 15  RKSTPPPFLLKTYMLVEDPATDGVISWNSDGTAFVVWQPAEFARDLLPTLFKHSNFSSFV 74

Query: 92  RQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTNKQQ--------------- 151
           RQLNTYGFRKV T+RWEFCND F++GE+E LCEIRRRK WT +QQ               
Sbjct: 75  RQLNTYGFRKVATSRWEFCNDMFRRGERELLCEIRRRKAWTKQQQQQQQQQQAVGGPADQ 134

Query: 152 ---HEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVSMKNKCRELFDLVAKY 211
               E+++DQRSSS+ SSSS Y++L+DENKRLKKENG L SEL SMKNKC+EL DLVA +
Sbjct: 135 NGVQELEDDQRSSST-SSSSGYSSLVDENKRLKKENGVLCSELTSMKNKCKELLDLVAMH 194

Query: 212 ENISKKEEEDERPKLFGVRLE-EGERERKRKRAEEISETATFLLSQSCK 242
               K+EE+DERPKLFGVRLE +G+RERKRKRA EISETA+ LLSQSCK
Sbjct: 195 AGPEKEEEDDERPKLFGVRLEVQGDRERKRKRA-EISETASILLSQSCK 241

[Close]
BLAST of Cla002516 vs. TrEMBL
Match: A0A151TU31_CAJCA (Heat stress transcription factor B-3 OS=Cajanus cajan GN=KK1_009724 PE=3 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.0e-79
Identity = 160/239 (66.95%), Postives = 187/239 (78.24%), Query Frame = 1 

Query: 9   NKNDQKGLPSWPPRTAESEIIMRKKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVW 68
           N +D KGL           +   +K T PPFL+KTY +VEDPATD+V+SWN +GTAFVVW
Sbjct: 6   NDHDNKGL-----------LECARKCTPPPFLMKTYMLVEDPATDDVVSWNREGTAFVVW 65

Query: 69  QTVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRR 128
           Q  EFA+D+LP LFKH NFSSFVRQLNTYGFRKV T+RWEF NDKF+KGE+E L EIRRR
Sbjct: 66  QPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFFNDKFKKGERELLHEIRRR 125

Query: 129 KTWTNKQQ-----HEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVSMKNKC 188
           K WTNKQQ      + DEDQRSSS+ SSSS Y TL+DENKRLKKENG LSSEL SMK KC
Sbjct: 126 KAWTNKQQPNAPNQDSDEDQRSSST-SSSSGYTTLVDENKRLKKENGVLSSELTSMKRKC 185

Query: 189 RELFDLVAKYENISKKEEEDERPKLFGVRLE-EGERERKRKRAEEISETATFLLSQSCK 242
           +EL DLVAKY + +K++EEDERPKLFGVRL+ +G RE KR R  E+SE+A+ +LSQSCK
Sbjct: 186 KELLDLVAKYSSHAKEKEEDERPKLFGVRLDVQGGREMKRNRT-EMSESASIMLSQSCK 231

[Close]
BLAST of Cla002516 vs. NCBI nr
Match: gi|659121625|ref|XP_008460754.1| (PREDICTED: LOW QUALITY PROTEIN: heat stress transcription factor B-3 [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 4.6e-110
Identity = 202/243 (83.13%), Postives = 220/243 (90.53%), Query Frame = 1 

Query: 1   MEAGVS--NNNKNDQKGLPSWPPRTAESEIIMRKKSTAPPFLLKTYTVVEDPATDEVISW 60
           MEAGVS  NNN+N++K L SWPP  AESEI MRK +TAP FL+KTY +VEDP TD+VISW
Sbjct: 1   MEAGVSDNNNNRNEEKKLESWPPWKAESEIRMRKSTTAP-FLMKTYRMVEDPGTDDVISW 60

Query: 61  NDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGE 120
           N DGTAFVVWQT EFAKD+LPKLFKH NFSSFVRQLNTYGFRKVTTTRWEFCN+KFQKGE
Sbjct: 61  NSDGTAFVVWQTAEFAKDILPKLFKHSNFSSFVRQLNTYGFRKVTTTRWEFCNEKFQKGE 120

Query: 121 KEKLCEIRRRKTWTNKQQHEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVS 180
           K+KLCEI+RRK W+NKQQH +DED+RS+SSNSSSSQYNTLMDENKRLKKENGALSSEL S
Sbjct: 121 KKKLCEIQRRKKWSNKQQHGVDEDRRSTSSNSSSSQYNTLMDENKRLKKENGALSSELAS 180

Query: 181 MKNKCRELFDLVAKYENISKKEEEDERPKLFGVRLEEGERERKRKRAEEISETATFLLSQ 240
           MKNKC+ELFDLVA YENISKKE+EDER KLFGVRL EG+RERKRKR EEISET T LLSQ
Sbjct: 181 MKNKCKELFDLVATYENISKKEDEDERXKLFGVRL-EGDRERKRKRGEEISETTTILLSQ 240

Query: 241 SCK 242
           SCK
Sbjct: 241 SCK 241

[Close]
BLAST of Cla002516 vs. NCBI nr
Match: gi|449463360|ref|XP_004149402.1| (PREDICTED: heat stress transcription factor B-3 [Cucumis sativus])

HSP 1 Score: 403.3 bits (1035), Expect = 3.0e-109
Identity = 204/243 (83.95%), Postives = 217/243 (89.30%), Query Frame = 1 

Query: 1   MEAGVSNNN--KNDQKGLPSWPPRTAESEIIMRKKSTAPPFLLKTYTVVEDPATDEVISW 60
           ME GVSNNN  +N++K L SWPPRTAE+EI MRK ST  PFL+KTY +VEDPATD+VISW
Sbjct: 1   MEDGVSNNNNNRNEEKKLGSWPPRTAENEIRMRK-STPAPFLMKTYRMVEDPATDDVISW 60

Query: 61  NDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGE 120
           N DGTAFVVWQT EFAKDVLPKLFKH NFSSFVRQLNTYGFRKV TTRWEFCN+KFQKGE
Sbjct: 61  NSDGTAFVVWQTAEFAKDVLPKLFKHSNFSSFVRQLNTYGFRKVRTTRWEFCNEKFQKGE 120

Query: 121 KEKLCEIRRRKTWTNKQQHEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVS 180
           KEKLCEIRRRK W NK+QHE+DEDQRS+SSNSSSSQY TLMDENKRLKKENGALSSEL S
Sbjct: 121 KEKLCEIRRRKKWRNKRQHEVDEDQRSTSSNSSSSQYITLMDENKRLKKENGALSSELAS 180

Query: 181 MKNKCRELFDLVAKYENISKKEEEDERPKLFGVRLEEGERERKRKRAEEISETATFLLSQ 240
           MKNKC+ LFDLVA YENISKKE+ED RPKLFGVRL EGERERK KR EEISET T LLSQ
Sbjct: 181 MKNKCKGLFDLVATYENISKKEDEDVRPKLFGVRL-EGERERKIKRGEEISETTTILLSQ 240

Query: 241 SCK 242
           SCK
Sbjct: 241 SCK 241

[Close]
BLAST of Cla002516 vs. NCBI nr
Match: gi|743869673|ref|XP_011033345.1| (PREDICTED: heat stress transcription factor B-3-like [Populus euphratica])

HSP 1 Score: 317.4 bits (812), Expect = 2.2e-83
Identity = 162/219 (73.97%), Postives = 186/219 (84.93%), Query Frame = 1 

Query: 32  KKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFV 91
           +KST PPFLLKTY +VEDPATDEVISWND+GT FVVWQ  EFA+D+LP LFKH NFSSF 
Sbjct: 12  RKSTPPPFLLKTYMLVEDPATDEVISWNDEGTGFVVWQPAEFARDLLPTLFKHSNFSSFF 71

Query: 92  RQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTNKQQ---------HEIDED 151
           RQLNTYGFRKV T+RWEFCND F+KGE+E LC+IRRRK W++KQQ          E++ED
Sbjct: 72  RQLNTYGFRKVATSRWEFCNDMFRKGERELLCQIRRRKAWSSKQQPIAPIQVTTQELEED 131

Query: 152 QRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVSMKNKCRELFDLVAKYENISKKEEE 211
           QRSSS+ SSSS+Y TL+DENKRLKKENG LS+EL SMK KC+EL DLVAKY ++ +KEEE
Sbjct: 132 QRSSST-SSSSEYTTLVDENKRLKKENGVLSTELTSMKRKCKELLDLVAKYAHL-EKEEE 191

Query: 212 DERPKLFGVRLE-EGERERKRKRAEEISETATFLLSQSC 241
           DERPKLFGVRLE EG+RERKRKRA EISE+A+ LLSQSC
Sbjct: 192 DERPKLFGVRLEAEGDRERKRKRA-EISESASILLSQSC 227

[Close]
BLAST of Cla002516 vs. NCBI nr
Match: gi|566208889|ref|XP_002323320.2| (Heat Stress Transcription Factor family protein [Populus trichocarpa])

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-82
Identity = 161/219 (73.52%), Postives = 185/219 (84.47%), Query Frame = 1 

Query: 32  KKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAFVVWQTVEFAKDVLPKLFKHCNFSSFV 91
           +KST PPFLLKTY +VEDPATDEVISWN++GT FVVWQ  EFA+D+LP LFKH NFSSFV
Sbjct: 12  RKSTPPPFLLKTYMLVEDPATDEVISWNEEGTGFVVWQPAEFARDLLPTLFKHSNFSSFV 71

Query: 92  RQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEIRRRKTWTNKQQ---------HEIDED 151
           RQLNTYGFRKV T+RWEFCND F+KGE+E LC+IRRRK W++KQQ          E +ED
Sbjct: 72  RQLNTYGFRKVATSRWEFCNDMFRKGERELLCQIRRRKAWSSKQQPIAPIQVTTQEFEED 131

Query: 152 QRSSSSNSSSSQYNTLMDENKRLKKENGALSSELVSMKNKCRELFDLVAKYENISKKEEE 211
           QRSSS+ SSSS+Y TL+DENKRLKKENG LS+EL SM  KC+EL DLVAKY ++ +KEEE
Sbjct: 132 QRSSST-SSSSEYTTLVDENKRLKKENGVLSTELTSMNRKCKELLDLVAKYAHL-EKEEE 191

Query: 212 DERPKLFGVRLE-EGERERKRKRAEEISETATFLLSQSC 241
           DERPKLFGVRLE EG+RERKRKRA EISE+A+ LLSQSC
Sbjct: 192 DERPKLFGVRLEAEGDRERKRKRA-EISESASILLSQSC 227

[Close]
BLAST of Cla002516 vs. NCBI nr
Match: gi|802729186|ref|XP_012086190.1| (PREDICTED: heat stress transcription factor B-3 [Jatropha curcas])

HSP 1 Score: 312.4 bits (799), Expect = 7.0e-82
Identity = 167/248 (67.34%), Postives = 186/248 (75.00%), Query Frame = 1 

Query: 6   SNNNKNDQKGLPSWPPRTAESEIIMRKKSTAPPFLLKTYTVVEDPATDEVISWNDDGTAF 65
           +NN+ N+ K L          E    +KST PPFLLKTY +VEDPATD V+SWNDDGT F
Sbjct: 7   NNNHNNNNKAL----------EYQYVRKSTPPPFLLKTYMLVEDPATDHVVSWNDDGTGF 66

Query: 66  VVWQTVEFAKDVLPKLFKHCNFSSFVRQLNTYGFRKVTTTRWEFCNDKFQKGEKEKLCEI 125
           +VWQ  EFA+D+LP LFKH NFSSFVRQLNTYGFRKV T+RWEFCND F+KGEKE LC+I
Sbjct: 67  IVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFCNDMFRKGEKELLCQI 126

Query: 126 RRRKTWTNKQQ---------HEIDEDQRSSSSNSSSSQYNTLMDENKRLKKENGALSSEL 185
           RRRK W+NKQQ          E DEDQRSSS+ SSSS+Y  L+DENKRLKKEN  LSSEL
Sbjct: 127 RRRKAWSNKQQPNAQIQTTPQESDEDQRSSST-SSSSEYGVLVDENKRLKKENKVLSSEL 186

Query: 186 VSMKNKCRELFDLVAKYENISKKEEEDE--RPKLFGVRLE-EGERERKRKRAEEISETAT 242
             MK KC+EL DLVAKY    K+EEE+E   PKLFGVRLE  GERERKRKRA EI E AT
Sbjct: 187 TDMKRKCKELLDLVAKYTRFEKEEEEEEDASPKLFGVRLEVAGERERKRKRA-EIRECAT 242

The following BLAST results are available for this feature:
BLAST of Cla002516 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HSFB3_ARATH2.1e-5451.24Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1[more]
HSF24_SOLPE4.4e-4448.97Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1[more]
HFB2B_ORYSJ1.5e-3942.41Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B ... [more]
HFB2A_ORYSJ1.5e-3942.92Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A ... [more]
HFB2A_ARATH6.2e-3836.19Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=... [more]
BLAST of Cla002516 vs. TrEMBL
Match NameE-valueIdentityDescription
B9II85_POPTR7.5e-8373.52Heat Stress Transcription Factor family protein OS=Populus trichocarpa GN=POPTR_... [more]
A0A067K1D9_JATCU4.9e-8267.34Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21103 PE=3 SV=1[more]
A0A0U3SRJ2_VITPS1.4e-8170.80Transcription factor HsfB3a OS=Vitis pseudoreticulata PE=2 SV=1[more]
F6HKV6_VITVI1.8e-8169.87Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g08750 PE=3 SV=... [more]
A0A151TU31_CAJCA1.0e-7966.95Heat stress transcription factor B-3 OS=Cajanus cajan GN=KK1_009724 PE=3 SV=1[more]
BLAST of Cla002516 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121625|ref|XP_008460754.1|4.6e-11083.13PREDICTED: LOW QUALITY PROTEIN: heat stress transcription factor B-3 [Cucumis me... [more]
gi|449463360|ref|XP_004149402.1|3.0e-10983.95PREDICTED: heat stress transcription factor B-3 [Cucumis sativus][more]
gi|743869673|ref|XP_011033345.1|2.2e-8373.97PREDICTED: heat stress transcription factor B-3-like [Populus euphratica][more]
gi|566208889|ref|XP_002323320.2|1.1e-8273.52Heat Stress Transcription Factor family protein [Populus trichocarpa][more]
gi|802729186|ref|XP_012086190.1|7.0e-8267.34PREDICTED: heat stress transcription factor B-3 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR011991Winged helix-turn-helix DNA-binding domain
IPR027725HSF_fam
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009408 response to heat
biological_process GO:0009407 toxin catabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla002516Cla002516.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingPRINTSPR00056HSFDOMAINcoord: 77..89
score: 1.2E-18coord: 90..102
score: 1.2E-18coord: 39..62
score: 1.2
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 39..128
score: 1.4
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 35..128
score: 5.3
IPR000232Heat shock factor (HSF)-type, DNA-bindingPROSITEPS00434HSF_DOMAINcoord: 78..102
scor
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 35..128
score: 3.6
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 35..128
score: 3.54
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 19..213
score: 4.5
NoneNo IPR availableunknownCoilCoilcoord: 155..182
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla002516Cla97C04G070500Watermelon (97103) v2wmwmbB295
Cla002516Csa4G171490Cucumber (Chinese Long) v2cuwmB344
Cla002516MELO3C023104Melon (DHL92) v3.5.1mewmB580
Cla002516ClCG04G003410Watermelon (Charleston Gray)wcgwmB258
Cla002516CSPI04G10760Wild cucumber (PI 183967)cpiwmB352
Cla002516Cucsa.164290Cucumber (Gy14) v1cgywmB301
Cla002516Cp4.1LG10g11490Cucurbita pepo (Zucchini)cpewmB085
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla002516Watermelon (97103) v2wmwmbB296