Carg25484 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATAAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTCTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCTACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAGTCGCTCTTGGACCGTTTTCTCACTGGAAACTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCCGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCAACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCAATGGTCACCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATAAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTCTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCTACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAGTCGCTCTTGGACCGTTTTCTCACTGGAAACTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCCGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCAACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCAATGGTCACCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG ATGAAGAAATCTCTCGGCCGTCGGAAAATTGAAATAAAAAAGCTTGAGAAGAAGAGTAGCCAGCAGGTTACCTTCTCTAAACGCCGCGCCGGACTCTTCAACAAGGCGGCGGAGCTTTCCGTTCTGTGCGGTGCTGAGATCGCGATCCTCGTCTCCTCTGCTACCAACAAGCTCTATACATTCGGTCATCCCAATGTTGAGTCGCTCTTGGACCGTTTTCTCACTGGAAACTCTGCTCCGCCTAAGCCGGCTGAGGCCTACCTCCCTCTGCAGGAGTTGAACCGCGATTTTGACGATGTGGCGGCCGAGTTCGACATTGAGAAGAGGCGCGCGGCAGAGCGCTCGAGTAACGATCGATTTTGGTGGGATGAGCCGCTGGAATCTATGAAAATCGACGAACTGAAGCGATTCCGGTCGTCGTTGGTGGAACTGAGAGGAAAAGTGGCGGAGAGAGTGGAGAAATTTACGGATATGAGAACAGAAGGATCTCCGATACCTGCTCTGCAGCCGTCAACTCCTCCGTCGATTACCCTGGTCGGAAACCTCCAACCGCCGCCAACGACTCCATCAATTGACCTCGTCGAAAACCTCCAACGGCCGCCGACGCCTCCATCAATTGGCTTCTTTGAAAATCTCCAATGGCCGTCGACGCCTCCATCAATTGGCCTCTTCGAAAATCTCCGATGGCCGTCGACGCCTCCATCAATTGACCTCGTCAAAAGCCTCCAATGGTCACCGATGCCGTTGATTCACCTTGCTGAAAACGACCAATGTCTGCCGTCGTCGTTTCATATCTCTGGAAACCACTCTGTCGCGCGACGGCTGAATATGCTAGACTAG MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYTFGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEGSPIPALQPSTPPSITLVGNLQPPPTTPSIDLVENLQRPPTPPSIGFFENLQWPSTPPSIGLFENLRWPSTPPSIDLVKSLQWSPMPLIHLAENDQCLPSSFHISGNHSVARRLNMLD
BLAST of Carg25484 vs. NCBI nr
Match: XP_023513250.1 (agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo] >XP_023513251.1 agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102 Identity = 278/294 (94.56%), Postives = 278/294 (94.56%), Query Frame = 0
BLAST of Carg25484 vs. NCBI nr
Match: XP_022986583.1 (agamous-like MADS-box protein AGL61 [Cucurbita maxima]) HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101 Identity = 273/279 (97.85%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of Carg25484 vs. NCBI nr
Match: XP_022944450.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata]) HSP 1 Score: 366.3 bits (939), Expect = 9.2e-98 Identity = 270/294 (91.84%), Postives = 275/294 (93.54%), Query Frame = 0
BLAST of Carg25484 vs. NCBI nr
Match: XP_022944391.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata]) HSP 1 Score: 339.7 bits (870), Expect = 9.2e-90 Identity = 259/310 (83.55%), Postives = 266/310 (85.81%), Query Frame = 0
BLAST of Carg25484 vs. NCBI nr
Match: XP_023512238.1 (agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 332.4 bits (851), Expect = 1.5e-87 Identity = 259/310 (83.55%), Postives = 265/310 (85.48%), Query Frame = 0
BLAST of Carg25484 vs. TAIR10
Match: AT5G60440.1 (AGAMOUS-like 62) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-27 Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 0
BLAST of Carg25484 vs. TAIR10
Match: AT2G24840.1 (AGAMOUS-like 61) HSP 1 Score: 112.5 bits (280), Expect = 4.3e-25 Identity = 68/189 (35.98%), Postives = 111/189 (58.73%), Query Frame = 0
BLAST of Carg25484 vs. TAIR10
Match: AT1G17310.1 (MADS-box transcription factor family protein) HSP 1 Score: 95.5 bits (236), Expect = 5.5e-20 Identity = 63/159 (39.62%), Postives = 96/159 (60.38%), Query Frame = 0
BLAST of Carg25484 vs. TAIR10
Match: AT1G65360.1 (AGAMOUS-like 23) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-18 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 0
BLAST of Carg25484 vs. TAIR10
Match: AT2G34440.1 (AGAMOUS-like 29) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-18 Identity = 55/159 (34.59%), Postives = 96/159 (60.38%), Query Frame = 0
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|Q9FKK2|AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.9e-26 Identity = 65/169 (38.46%), Postives = 104/169 (61.54%), Query Frame = 0
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|Q4PSU4|AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 7.8e-24 Identity = 68/189 (35.98%), Postives = 111/189 (58.73%), Query Frame = 0
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|O80807|AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.4e-17 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 0
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|O64703|AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17 Identity = 55/159 (34.59%), Postives = 96/159 (60.38%), Query Frame = 0
BLAST of Carg25484 vs. Swiss-Prot
Match: sp|Q9LMM8|AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.6e-16 Identity = 50/97 (51.55%), Postives = 65/97 (67.01%), Query Frame = 0
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A1S3CAA4|A0A1S3CAA4_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103498214 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 9.1e-62 Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A0A0LLS2|A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 7.5e-56 Identity = 116/162 (71.60%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A0A0LE01|A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55 Identity = 120/194 (61.86%), Postives = 147/194 (75.77%), Query Frame = 0
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A0A0LW53|A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181400 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54 Identity = 115/166 (69.28%), Postives = 135/166 (81.33%), Query Frame = 0
BLAST of Carg25484 vs. TrEMBL
Match: tr|A0A1S3CRI8|A0A1S3CRI8_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.7e-53 Identity = 113/177 (63.84%), Postives = 138/177 (77.97%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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