Carg12891 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGATCATATTGCTCCTTGTATTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCGTACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAAGTGAGTGTTTGTTGAAACTGATCAATTTTCTCACTTCGCCACGATAATGTGCAACGTTTCGTGTTATTTGTAATATGGGCACAAGATCAGTTCTCTTTTCTGTTTTTCATTGTCGCAATCGCATTGAGTTGTGTTTGGTGCACATGAAAATTATCTATCTGACCAGACTATTGTTTCATGGCAGCAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGA ATGTTGAGATCATATTGCTCCTTGTATTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCGTACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGA ATGTTGAGATCATATTGCTCCTTGTATTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCGTACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGA MLRSYCSLYCRVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVYCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPKR
BLAST of Carg12891 vs. NCBI nr
Match: XP_022946766.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 411.8 bits (1057), Expect = 1.4e-111 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Carg12891 vs. NCBI nr
Match: XP_023545831.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 410.6 bits (1054), Expect = 3.2e-111 Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Carg12891 vs. NCBI nr
Match: XP_022999132.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 407.9 bits (1047), Expect = 2.1e-110 Identity = 197/200 (98.50%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of Carg12891 vs. NCBI nr
Match: XP_022946767.1 (alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 403.3 bits (1035), Expect = 5.1e-109 Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Carg12891 vs. NCBI nr
Match: XP_023545832.1 (alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 402.1 bits (1032), Expect = 1.1e-108 Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of Carg12891 vs. TAIR10
Match: AT1G54850.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-57 Identity = 109/196 (55.61%), Postives = 155/196 (79.08%), Query Frame = 0
BLAST of Carg12891 vs. TAIR10
Match: AT1G54840.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 131.7 bits (330), Expect = 5.2e-31 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Carg12891 vs. TAIR10
Match: AT1G20870.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 119.0 bits (297), Expect = 3.5e-27 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0
BLAST of Carg12891 vs. TAIR10
Match: AT1G76440.1 (HSP20-like chaperones superfamily protein) HSP 1 Score: 107.8 bits (268), Expect = 8.0e-24 Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of Carg12891 vs. Swiss-Prot
Match: sp|Q84K79|IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 GN=ACD22.3 PE=1 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.0e-56 Identity = 109/196 (55.61%), Postives = 155/196 (79.08%), Query Frame = 0
BLAST of Carg12891 vs. Swiss-Prot
Match: sp|Q8RWL4|IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 9.4e-30 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Carg12891 vs. Swiss-Prot
Match: sp|Q9SYQ0|IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.3e-26 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0
BLAST of Carg12891 vs. TrEMBL
Match: tr|A0A0A0LGB8|A0A0A0LGB8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021590 PE=3 SV=1) HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102 Identity = 182/200 (91.00%), Postives = 194/200 (97.00%), Query Frame = 0
BLAST of Carg12891 vs. TrEMBL
Match: tr|A0A1S3C0B8|A0A1S3C0B8_CUCME (alpha-crystallin domain-containing protein 22.3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495185 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 4.4e-101 Identity = 180/200 (90.00%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of Carg12891 vs. TrEMBL
Match: tr|A0A1S3C0T3|A0A1S3C0T3_CUCME (alpha-crystallin domain-containing protein 22.3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495185 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 1.6e-98 Identity = 178/200 (89.00%), Postives = 191/200 (95.50%), Query Frame = 0
BLAST of Carg12891 vs. TrEMBL
Match: tr|Q84KA6|Q84KA6_CUCME (Heat shock protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 5.2e-86 Identity = 155/173 (89.60%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Carg12891 vs. TrEMBL
Match: tr|Q6GX30|Q6GX30_CUCME (Hsp2 (Fragment) OS=Cucumis melo OX=3656 GN=Hsp2 PE=2 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72 Identity = 134/151 (88.74%), Postives = 146/151 (96.69%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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