CmaCh12G010820 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTATTCATCTCAGCCCAATGCAATGCAATGTCTCTTATAAATTCATCTCCCACTGGCATTTCTCCTTGTCTTTAATACTGGATTCGTTGACAGAATCGGAACTCCCTTTTCCGAAGTCCCCGGCTACTTTCCGATGACTTCTCCGGCTAGGTATATTCTTCTTTTGACGTTCGATGTAACCATGGTGTCTGTATCTCTGAATCAGTTTTTAATCATCGGTTACTGCTGCTGTGGGGATTTTCTCTTTTCTAATTACTGTCTTCCGTTTATTGGCACATGAACATTCTATTGTTGAAGAAGATGGGTATTAGGTCAAGGGTTTTTGGTGATAATGAGAAATGAACTGTAGTTACGGGTTTTAGAAGAATTGATGGAAATTTTGTGTTCTATTTGTTTGCTATTGAATGTGTGTATGTGTAATGGTTATTTTTCTGTGTTCTTGTTTTGAATTGGTGCTTATGAGTGGAAATCAGGGGGGAAATTTGTTGGAGATTTTGGCGATTTTAAAATAGTTGAGGTTCTCGGTAATGGGAGTTCGTGGATGAGCCTTAACTTTTCTTATCTATGGTTCTGATTGTATTTTGAGACGAGTTCTTTTCTTTGGTCGGTATGAACACAAGTGCTTGTTCATGGCTCTTCTTTTTGGACCTGAACTGATTTGATATTCTTATGTACTTCACGGGTTCATGAGTTTTTCTTTTTTTCTTTGGAGAAACTGAATTTTGGTAAGAGCATGTAATAATAAAGAATTTAAGGTATGAGTTCCAGTCATGGTGGCCTATCTGCTTAGAATTTAATAAGTTATCTTAGTGACCGAATGTAGTAGTTTCAAATGATTGTCCCTTAAGATTTGTCAAGGTGTGCACAAGTTGGCTCAAAGATTCATAGATTTCAAAAAAGAAAAACACCTTAGTTATTTCCAACAATCTTACGTTTTTAGAAAAATAACACCGAGAGGAGAGGAAGAAGAAGAAAAAGAAGGGCCGACTTGAGTTGAGTTATTGCCAACACTCTTACGTTTTTTAGATATGTTAACCTTCTCTTAATCACAAATGATAAACACCTTAGTTGTTGTGTGTTACACCCTCCTCCATCTTGAGAATTTCTGTTTGTTGCTGTCTCGTTCTCTCTCTTGGTCGTGTAAACTCCCCCAGATGTCCAAATTCACATAATATCCTATTGACAGCTTAGGCCACAGGCATTACAGCATTTGATAGACCAAGCACATGATTAACCTCGTGGCAATTTTTTTAGGCATGTGGCACACTCTTTTGTACCTGTCCCTATAGTTGTGAGATCCCACATCGGTTGGGAAGAAGAATGAAACATTCTTTATAAGGTGTGGAAACCTCCCCCTAGCAGATGTGTCTTAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGAGTTGGGCTGTTACAAATGGTATCAAAGCCAGACATCGGGCGATGTGCCAGTGAGGAGCCTGAGCCACGAAGGGGGGTGGACACGAGACGGTGTGCCAACAAGGACGTTGGGTCTCGAAGAGGGGTGGATTGAGGGGTCTCATATCGATTGGAGAAGAAAACGAGTTCCAGCGAGGACGCTGAGCCCCAAAGGGGGGTGAATTGTGAGATCCCACATGGGTTGAGGAGGAGAACGAATGATTTTTTATAAGAGTGTGAAAATCTCTCCTTAGCAGATGGGTTTTAAAAACCTTAAGGGAAGCCCGAAAGAAAAAGTTTAAAAATGACAATATCTGCTAGCGGAGTGCTTGGGCCATTACAGTAGCTCAGTAGCTTACTGTCGAGGCATTCATCTTTGTCTTCTTATATTAGTAACGTGAATAAATACTCTGGAAGAAACAAGTCCATTAAGTGAGTCCTCTCTGTGACATTTTGGCTTCAGTCTGAGAAAAGTTTATTTACGCTTGAGAAATTTATTTTTTTCAAAGAGGTTATGTTTGTCAAGAGAAATTGTTGGAAATGGCTGTCAAAATCTGCCCTTCGTTCTATCACGGCTCATCTTCTATCTGTTGTTTCGACCACATGAACTACACCTCGGTGAAGAAAGGAAATCTTTAAGACTAAAATATCCTTTCTTTTTCTTACTATTTTTCTCTTGAAAATCTGTATGCATTGGAATAATTTGACCAAATAGGTTATGCCTAGATATTTCATGATATGTTAGCATACTTTCCAATCTTTTATTTTCTATTTATAATTATACTTTGGTTCATTATAAGTCATATATCTCATATCACGGTGGTGATATCTTTTATGCTCTTCTCCCCCCACCCCCGCCTTACATGATGAGCTTGTCACTTGCACGTAAACACTATATCACATACACGCAAGAGGGTAGAAGTTTCCTTCACAATTTTTGATTTTGGCAACGACTTTTGTCATAATCTCAGACTAGATTGTATTAGATGTCTGTCACCCTCCTCAAATGCCCATTACAACACCTCCAAGACCATCTTTTACTTATGAGTTAATTCTCTAAGGAAGAAATGTTCTCAGTTGACTTGAGTAGGGACTGAACATACTGTTGGACTGCTTATAGTATTGGGTCAATTTGGAAGTGTTTGTTATATCTTTTGTAGCGTAAAGTTTAAAGAACCCCACCTCCTAGTTATATGAGCTTGGATGCTTGGAGATATCTTGGTGTCCCTAAATGGAAAATTTAGGCTCTGTTTATAACCATTTGGTTTTTGAAAATTTGACTAAGAATTTAAATATTTTATTTTTGAGGAAGATGTAACACATCTTACAGAAACGGTAAGAAAACAAGTACAATTTTCAAAAACCAAAATGGTTATCAAATGTAGCCTTAATAATTCAAAATCTTTGTTCTCTCAAAGTTGACCTTTTGATGCATGAACCTCCTTGAGATTAGTGGGAGTGGGAGTGAGACCTGAGCATAATATGAGGGAGATTATGAGATCCCAAATCGGTTGGAGAGGAGAAGGAAGCATTCTTTATAAGGGTGTAGAAACCTCTCCTAGCATACGCGTTTTAAAAACCTTGAGGGGAAGCACAAAAGAGAAAGCACAAATAAGACAATATCTGCTAGTGGTGGGCTTAGGCCGTTATAAATGGTATCAGAGCCAAACACGGGGCGATTTTCCGGCGAGGAAGCTGAACCTTGAAGGGGGTGGACATGAGGCGGTGTGCCAGCAAGGACGCTGGCCCCAAAGGGGGTGGATTGTGGGGTCTCACATTGATTGGAGAAGCGAACAAGTGTCGGCGAGGACGCTTGGTCCTGAAAGGGGTAGATTGTAAGATCCCACATCGGTTGGGGAGAAGAATGAAACATTCTTTTTAAAGGTGTGGAAATCTCTCTCTAGTAGACGTGTTTTAAAAACTTTGAGGGAAGTCCAAAAGAGAAAGCCCGAAGAGGGTAAAATGCCCCTATCAATGGGCTTGGACTTGGACTGTTAGAGTGATCCTTTAGCACCCTTTTTATTAGGAAAAGAAAGGATCTTAAAGACTCATCCTTCATGTCTGTTCAATAAACGGTATAACGGAAAGCCATCAGACTATGTTTTGATCATATTACTGTCTTGCAGGGCTGAGGACACAAGAAAAAATGAGGCAGAACCATTAAGTCTTCGTAACCAGATTCTCGATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGAGCAGAAGATCCCGAGGCTGTGGTGAATGTTGGGCCAGCTATGGTATATTGTCCTCTAACAACCCATCAAGAGTGGGATAATATTGTATCTTCCACCAAAAGCGGGGTTGCCCTCACCGGGACTGCAGCCATGGGAAAAGTTGGACCAGTTATCGGACGTGTGGACATCGGTGAGAATGACAATTCGTACTTCTTCCGTGTCTCTCTTCCAGGGGTGGCTAGAGATCAAAGTGAGTGTTTGTTGAAATCAATCAGTTCTCTCTCACCTACTCTCCTACCATAATGTGCAGCTGTTAATGTTATCCTACCAATATCAGCACAAGATTGTTCTTATATCTGTTGTTGCATCATCGCAATCATGTCTATTCCTGTTTCGGTGCACATGAAAACTATCTATCTGACCAGACTATTGTTTTCTGGCAGCAGACAGTTTCAGCTGTGACATGGACCCGGACGGGAAAGTGAAAATAATAGGAGTAACGACGACAGGCGAGAACATAGTATGTAAGAATTCACAAGTGTTTCGGATGCAGTCGAAAAATCTATGTCCACCAGGTCATTTCTCTATCACTTTTCAGCTACCTGGTCCTGTCAATAACCTGCAATTTTCTGGTGCTTTTGGGGCAGATGGGATTTTAGAAGGCAGTGTATCTAAAGGGTGATCAACAGGCTTAAATAGAGGGGGTGAGGCCTTTCTGATAAGGAAACAGGCCTATTAGGAAAGAACTTAATTTTTGCTCTGATTCCCTAGGAGATGCTTTGGAAGGACCTGCTGAATTTTGTTTGGCCTAGCTTACTAAGCGCGGGTTCTCTTATGACATCTTGGTCCAGGGGTCTTGGCTGAGCTTACTAAGCGTTGGTTCTCGAACCGGCCAAAACAACCCCTTCGAATCTGGAGAACGTGAAACATCAGGTCATTTTACATCTTGGTCCAAGGGTGTTGGCTTAGCTTACTAAGCATTGGTTCGAGATCGGCCGAGCAATCCCTTCGGACCTAGAGAACGTGAGACGCTGGTCTATAATTCTTCATTCCTCTCTCTCTCCCTTTCCCACTCATTGATTGAGTACTATCATTAGATCCTTTTTTGGATTATAATCAATTTCAAGTAACCCATCATCAAATTAAAAAGATCTTTGAAAATTGTCGTGAAAAAGGTGTATTAATAACACATGACAAACGATTGTTCACTTTGTAAAACTTTCTACGAATTTAAAATAATTTTTGTTTTAGGTGAATATTTGATCCTTACCCTACCAACC CGTATTCATCTCAGCCCAATGCAATGCAATGTCTCTTATAAATTCATCTCCCACTGGCATTTCTCCTTGTCTTTAATACTGGATTCGTTGACAGAATCGGAACTCCCTTTTCCGAAGTCCCCGGCTACTTTCCGATGACTTCTCCGGCTAGGGCTGAGGACACAAGAAAAAATGAGGCAGAACCATTAAGTCTTCGTAACCAGATTCTCGATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGAGCAGAAGATCCCGAGGCTGTGGTGAATGTTGGGCCAGCTATGGTATATTGTCCTCTAACAACCCATCAAGAGTGGGATAATATTGTATCTTCCACCAAAAGCGGGGTTGCCCTCACCGGGACTGCAGCCATGGGAAAAGTTGGACCAGTTATCGGACGTGTGGACATCGGTGAGAATGACAATTCGTACTTCTTCCGTGTCTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGTTTCAGCTGTGACATGGACCCGGACGGGAAAGTGAAAATAATAGGAGTAACGACGACAGGCGAGAACATAGTATGTAAGAATTCACAAGTGTTTCGGATGCAGTCGAAAAATCTATGTCCACCAGGTCATTTCTCTATCACTTTTCAGCTACCTGGTCCTGTCAATAACCTGCAATTTTCTGGTGCTTTTGGGGCAGATGGGATTTTAGAAGGCAGTGTATCTAAAGGGTGATCAACAGGCTTAAATAGAGGGGGTGAGGCCTTTCTGATAAGGAAACAGGCCTATTAGGAAAGAACTTAATTTTTGCTCTGATTCCCTAGGAGATGCTTTGGAAGGACCTGCTGAATTTTGTTTGGCCTAGCTTACTAAGCGCGGGTTCTCTTATGACATCTTGGTCCAGGGGTCTTGGCTGAGCTTACTAAGCGTTGGTTCTCGAACCGGCCAAAACAACCCCTTCGAATCTGGAGAACGTGAAACATCAGGTCATTTTACATCTTGGTCCAAGGGTGTTGGCTTAGCTTACTAAGCATTGGTTCGAGATCGGCCGAGCAATCCCTTCGGACCTAGAGAACGTGAGACGCTGGTCTATAATTCTTCATTCCTCTCTCTCTCCCTTTCCCACTCATTGATTGAGTACTATCATTAGATCCTTTTTTGGATTATAATCAATTTCAAGTAACCCATCATCAAATTAAAAAGATCTTTGAAAATTGTCGTGAAAAAGGTGTATTAATAACACATGACAAACGATTGTTCACTTTGTAAAACTTTCTACGAATTTAAAATAATTTTTGTTTTAGGTGAATATTTGATCCTTACCCTACCAACC ATGACTTCTCCGGCTAGGGCTGAGGACACAAGAAAAAATGAGGCAGAACCATTAAGTCTTCGTAACCAGATTCTCGATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACATTCCTTCTTCTCCGCGAGCAGAAGATCCCGAGGCTGTGGTGAATGTTGGGCCAGCTATGGTATATTGTCCTCTAACAACCCATCAAGAGTGGGATAATATTGTATCTTCCACCAAAAGCGGGGTTGCCCTCACCGGGACTGCAGCCATGGGAAAAGTTGGACCAGTTATCGGACGTGTGGACATCGGTGAGAATGACAATTCGTACTTCTTCCGTGTCTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGTTTCAGCTGTGACATGGACCCGGACGGGAAAGTGAAAATAATAGGAGTAACGACGACAGGCGAGAACATAGTATGTAAGAATTCACAAGTGTTTCGGATGCAGTCGAAAAATCTATGTCCACCAGGTCATTTCTCTATCACTTTTCAGCTACCTGGTCCTGTCAATAACCTGCAATTTTCTGGTGCTTTTGGGGCAGATGGGATTTTAGAAGGCAGTGTATCTAAAGGGTGA MTSPARAEDTRKNEAEPLSLRNQILDVAPINSMPYIGPPLPHSYIPSSPRAEDPEAVVNVGPAMVYCPLTTHQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGENDNSYFFRVSLPGVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGSVSKG
BLAST of CmaCh12G010820 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 6.0e-58 Identity = 111/205 (54.15%), Postives = 155/205 (75.61%), Query Frame = 1
BLAST of CmaCh12G010820 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 4.5e-29 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 1
BLAST of CmaCh12G010820 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 5.1e-25 Identity = 58/123 (47.15%), Postives = 80/123 (65.04%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TrEMBL
Match: A0A0A0LGB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021590 PE=4 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 1.8e-101 Identity = 180/204 (88.24%), Postives = 195/204 (95.59%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TrEMBL
Match: Q84KA6_CUCME (Heat shock protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 2.8e-86 Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TrEMBL
Match: Q6GX30_CUCME (Hsp2 (Fragment) OS=Cucumis melo GN=Hsp2 PE=2 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 3.5e-73 Identity = 135/151 (89.40%), Postives = 145/151 (96.03%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TrEMBL
Match: W9QBR8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001971 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 5.1e-64 Identity = 122/190 (64.21%), Postives = 155/190 (81.58%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TrEMBL
Match: A0A067EWN6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025769mg PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 5.3e-61 Identity = 122/196 (62.24%), Postives = 150/196 (76.53%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 225.3 bits (573), Expect = 3.4e-59 Identity = 111/205 (54.15%), Postives = 155/205 (75.61%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-30 Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 115.9 bits (289), Expect = 2.9e-26 Identity = 58/123 (47.15%), Postives = 80/123 (65.04%), Query Frame = 1
BLAST of CmaCh12G010820 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22 Identity = 60/125 (48.00%), Postives = 76/125 (60.80%), Query Frame = 1
BLAST of CmaCh12G010820 vs. NCBI nr
Match: gi|778666755|ref|XP_011648803.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X1 [Cucumis sativus]) HSP 1 Score: 376.7 bits (966), Expect = 2.6e-101 Identity = 180/204 (88.24%), Postives = 195/204 (95.59%), Query Frame = 1
BLAST of CmaCh12G010820 vs. NCBI nr
Match: gi|659070400|ref|XP_008454874.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X1 [Cucumis melo]) HSP 1 Score: 375.6 bits (963), Expect = 5.7e-101 Identity = 180/204 (88.24%), Postives = 193/204 (94.61%), Query Frame = 1
BLAST of CmaCh12G010820 vs. NCBI nr
Match: gi|449442837|ref|XP_004139187.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X2 [Cucumis sativus]) HSP 1 Score: 368.2 bits (944), Expect = 9.1e-99 Identity = 178/204 (87.25%), Postives = 194/204 (95.10%), Query Frame = 1
BLAST of CmaCh12G010820 vs. NCBI nr
Match: gi|659070402|ref|XP_008454882.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X2 [Cucumis melo]) HSP 1 Score: 367.1 bits (941), Expect = 2.0e-98 Identity = 178/204 (87.25%), Postives = 192/204 (94.12%), Query Frame = 1
BLAST of CmaCh12G010820 vs. NCBI nr
Match: gi|28558785|gb|AAO45756.1| (heat shock protein-like protein [Cucumis melo subsp. melo]) HSP 1 Score: 326.2 bits (835), Expect = 4.0e-86 Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|