CmoCh12G010980 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh12G010980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	HSP20-like chaperones superfamily protein isoform 1
Location	Cmo_Chr12 : 10032111 .. 10036060 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATTCATCACAGCCCAATGCAATGCAATGTCGCTTATAAATTCATCTCCCACTGGCATTTCTCCTTGTCTTTAATACTGGATTCGTTGACAGAATCGGAACTCCCTTTTCCGAAGTCTCCGGCTACTTTCCGATGACTTCTCCGGCTAGGTATATTCTTCTTTTGACGTTCGATGTAACTACGGTGTCTGTATCTCTGTATCAGTTTTTAATCATCGGTTACTGCTGCTGTGGAGATTTTCTGTTTTCTAATTACTGTCTTCCGTTTATTGGCACTTGAACATTCTATTGTTGAAGAAGATAGGTATTAGGTCAAGGGTTTTTGGTGATAATGAGAAATGAACTGTTTACGGGTTTTAGAAGAATTGATGGAAATTTTTGTGCTCTATTTGTTTGCTATTGAATGTGTGTATGTGTAGTGGTTATTTTGCGGTGTTTTTGTTTTGAATTGGTGCGTAAGAGTGGAAATCAGGGGGAAATTTGTTGGAGATTTTGGCGATTTTAAAATAGTTGAGGTTCTCGGTAATGGGAGTTCGTGGATGAGCCTGAACTTTTGTCATCTATGGTTCTGATTGTATTTTGAGACGAGTTCTGTTCTTTGGTCGGTATGAAATTGGATTGAACGTAAGTGCTTGTTCATGGCTCTTCTTTTTGGACCTGAACTGATTTGATATTCTATGTACTTCACGGGTTCATGAGTTTTTCTTCTTTTTTTTGGAGAAGCTGAATTTTGGTTGACTTAATGGTTGATAAGAGCATGTAATAATAAAGGATTTAAGGAATGAGTTCAAGTCATGGTGGCCATCTGTTTAGAATTTAACAAGTGGTTTCAAATGGTTGTCTCTTAAGATTTGTCAAGGTGTGCGCAAGTTGTCTCAAAGATTCATAGATGTCAAAAAAGAAAAACACCTTAGTTATTTCCAACAATCTTACGTTTTTAGAAAAATGACACCGTGAGGAGAGGAAGAATAAGAAAAAGAAGGGCTGACTTGAGTTAAGTTATTGTCAACACTCTTACGTTTTTAGATATGTTAACCTTTTCTTAATCACAAATGATCAACACCTTAGTTGTTGTGTGTTACACCTTCCTCCATCTTAAGAATTTCTGTTTGTTGCTGTCTCGTTCTCTCTCTTGGTTGTGTAAACTCACCCGGATGTCCTAATTCACATAATATCCTATTGACAGCTTAGGCTAGGCATTACAGCATTTGATAGCCCAAGCACATGATTAACCTCGTGACAACTTTTTAGGCATGTGGCACTCTTTTGTATCTGTCCCTGTAGCTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAATCCTTGAGGGAAAACTTGAAAAGGAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGGGCTTGGGCCATTACAAATGGTATTAGAGCTAGACACCGAGCGGTGTGTCAGCAAGGAGGTTGAGCCCCGAAGAGGACAATATCTGCTATCGGTGGGCTTGAGCCGTTACAAATGGGATTAGAGCCAGACACCGGGCGATGTGCCAACGAGGCGACCAAGCCTCGAAAGGGGGTGGACACGAGGCGGTGTGCCAACAAGGATGCTGAGTCCCGAAGGGGGTGGATTGAGGGGTCCCACATTGATTGGAGAAGGGAACGAGTGTCAGCGAGGACGCTGGCCCCGAAGGGGGTGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAACATTTTTTATAAGGGTGTGGAAACCTTTCCCTAGCAGATGCGTTTTAAAAACCTTAAGGGGAAGCCCGAAAGGAAAAGCTCAAAGAGGACAATATCTGGTAGCGGAGGGCTTGGGCCGTTCGAGTAGCTTACCGTCCAGGCATTCATCTTTGCCTTCTTATATTAGTAACGGGAATAAATACTCTGGAAGAAACAAGTCCATTAAGTGAATCCTCTCTGTGACATTTTGGCATCAGTCTGAGAAAAATTTATTTACGCTTGAGAAATTTATTTTTTTTAAGGAGGTTATGTTTGTCAAGAGAAATTGTTGGAAATGGCTGTCAAAATCTGCCCTTCGTGTTCTATCACGGCTCATCTTCTATCTGTTGTTTCGACCACATGAACAACACCTCGGTGAAGAAAGGAAATCTTTAAGACTAAAATATCCTTTCTTATTCTTACTATTTTTCTCTTGAAAATCTGAATGCATTGGAATAATTTGACCAAATAGGTTATGCCTAGATATTTCATGATATGTTAGCATACTTTCCAATCTTTTATTTTCTATTTATAATTATACTTTGGTTCATTATAAGTCATATATCTCATATCTCGGTGGTGATATCTTTTATACTCTTCTCCCCTCACCCCTGCCTTACATGATGAGCTCATCACTTGCACGTAAACACTATATCACATACACACAAGAGGGTAGAAGTTTCCTTCACAATTTTTGCTTTTGGCAACGACTTTTGTCATAATCTCAGACTAGATTGTATTAGATGTCTGTCTCCCTCCTCAAATGCCCATTACAACACATCCAAGACCATCTTTTACTTATGAGTTAATTCTCTAAGGAAGAAATGTTCTCATTTGACTTGAGTAGGGACTGAACATGCTGTTGGACTGCTTATAGTATTGGTTCAATTTGGGAGTGTTTGCTATATCTTTTGTACCGTAGAGTTTAAAGACCCCCACCTCCAAGTGGTGGCCCTAGTTATATGAGCTCGGATGCTTGGAGATATCTTGGTGTCCCTGATTGGAAAACTATGTCCACCTCTGAGTTTCCTTTTTTTGTCATTTACTTTTTACATATGTTTTAAACTAAGAAAACGAAAAAATTGTTTTTGGAATTTGACTAAGAATTTAAATATTTTTTTAAGGAAGATGGAACACATCTTAGAGAAATGGTAAGAAAACAAGTACAATTTTTAAAAACCAAAATGGTTATCAAATGTAACCTTAATAATTCAAAATCTTTGTTCTCTCAAAGTAAGGACTGTTACAGGGATCCTTGATCACTACGTTTTTTAATTAGGAAAAGTAAGGATCTTAAAGACTCATCCTTCATGTCTGTTCAATAAACGGTATAAAGGAAAGCCATCAGACTATGTTTTGATCATATTACTGTCTTGCAGGGCTGAGGACACAAGAAAAAATGAGGCAGAACCATTAAGTCTTCGTAACCAGATTCTCGATGTGGCTCCCATCAATAGCATGCCATATATCGGTCCACCTCTACCACACAGCTACATTCCTTCTCCGCAAGCAGAAGATCCCGAGGCTGTGGTGAACGTTGGGCCTGCTATGGTATATTGTCCTCTGACAACCCGTCAAGAGTGGGACAATATTGTATCTTCCACCAAAAGCGGGGTTGCCCTCACTGGAACTGCAGCCATGGGAAAAGTTGGACCAGTTATCGGACGTGTGGACATCGGTGAGGATGACAATTCATACTTCTTCCGTGTCTCTCTTCCAGGGGTGGCTAGAGATCAAAGTGAGTGTTTGTTGAAATCAATCAGTTCTCTCTCACTTACTCTCCTACCATAATGTGCAGCTGTTAATGTTATCCTACCAATATCAGCACAAGATTGTTCTTAAATCTGTTGTTACATCGTCGCAATCATGTCGATTCCTGTTTCGGTGCACATGAAAACTATCTATTCTGACCAGACTATTGTTTTATGGCAGCAGACAGTTTCAGCTGCGACATGGACCCGGACGGGAAAGTGAAAATAATAGGAGTAACGACGACAGGCGAGAACATAGTATGTAAGAACTCACAAGTGTTTCGGATGCAGTCGAAAAATCTATGTCCACCAGGTCATTTCTCTATCACTTTTCAGCTACCTGGTCCTGTCAATAGCCTGCAATTTTCTGGTGCTTTTGGGGCAGATGGGATTTTAGAAGGCAGTGTAGCTAAAGGGTGA

mRNA sequence

GTATTCATCACAGCCCAATGCAATGCAATGTCGCTTATAAATTCATCTCCCACTGGCATTTCTCCTTGTCTTTAATACTGGATTCGTTGACAGAATCGGAACTCCCTTTTCCGAAGTCTCCGGCTACTTTCCGATGACTTCTCCGGCTAGGGCTGAGGACACAAGAAAAAATGAGGCAGAACCATTAAGTCTTCGTAACCAGATTCTCGATGTGGCTCCCATCAATAGCATGCCATATATCGGTCCACCTCTACCACACAGCTACATTCCTTCTCCGCAAGCAGAAGATCCCGAGGCTGTGGTGAACGTTGGGCCTGCTATGGTATATTGTCCTCTGACAACCCGTCAAGAGTGGGACAATATTGTATCTTCCACCAAAAGCGGGGTTGCCCTCACTGGAACTGCAGCCATGGGAAAAGTTGGACCAGTTATCGGACGTGTGGACATCGGTGAGGATGACAATTCATACTTCTTCCGTGTCTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGTTTCAGCTGCGACATGGACCCGGACGGGAAAGTGAAAATAATAGGAGTAACGACGACAGGCGAGAACATAGTATGTAAGAACTCACAAGTGTTTCGGATGCAGTCGAAAAATCTATGTCCACCAGGTCATTTCTCTATCACTTTTCAGCTACCTGGTCCTGTCAATAGCCTGCAATTTTCTGGTGCTTTTGGGGCAGATGGGATTTTAGAAGGCAGTGTAGCTAAAGGGTGA

Coding sequence (CDS)

ATGACTTCTCCGGCTAGGGCTGAGGACACAAGAAAAAATGAGGCAGAACCATTAAGTCTTCGTAACCAGATTCTCGATGTGGCTCCCATCAATAGCATGCCATATATCGGTCCACCTCTACCACACAGCTACATTCCTTCTCCGCAAGCAGAAGATCCCGAGGCTGTGGTGAACGTTGGGCCTGCTATGGTATATTGTCCTCTGACAACCCGTCAAGAGTGGGACAATATTGTATCTTCCACCAAAAGCGGGGTTGCCCTCACTGGAACTGCAGCCATGGGAAAAGTTGGACCAGTTATCGGACGTGTGGACATCGGTGAGGATGACAATTCATACTTCTTCCGTGTCTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGTTTCAGCTGCGACATGGACCCGGACGGGAAAGTGAAAATAATAGGAGTAACGACGACAGGCGAGAACATAGTATGTAAGAACTCACAAGTGTTTCGGATGCAGTCGAAAAATCTATGTCCACCAGGTCATTTCTCTATCACTTTTCAGCTACCTGGTCCTGTCAATAGCCTGCAATTTTCTGGTGCTTTTGGGGCAGATGGGATTTTAGAAGGCAGTGTAGCTAAAGGGTGA

Homology

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BLAST of CmoCh12G010980 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.9e-57
Identity = 110/204 (53.92%), Postives = 153/204 (75.00%), Query Frame = 1


Query: 1   MTSPARAEDTRKNEAEPLSLRN-QILDVAPINSMPYIGPPLPHSYIPSPQAEDPEAVVNV 60
           M S +     R+N + P + RN QIL+V P+NSMPYIGP + H+ + S +  D    V  
Sbjct: 1   MRSSSGLNGMRENNSFPDNTRNPQILEVTPLNSMPYIGP-VTHASMSSNRMNDSVEKVG- 60

Query: 61  GPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLP 120
           GPAM++ P  +  E+ N++S TK+GVALTG+AAMGK+G  IG VDI E ++SY+FRV+LP
Sbjct: 61  GPAMIFLPSDSSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALP 120

Query: 121 GVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLP 180
           GV+RD+ + FSC+++PDGK+ I G TTTGE  VCK++Q+F+M ++NLCPPGHF+I FQLP
Sbjct: 121 GVSRDEKE-FSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLP 180

Query: 181 GPVNSLQFSGAFGADGILEGSVAK 204
           GPV++ +F+G FG+DG+LEG V K
Sbjct: 181 GPVSNEEFNGNFGSDGVLEGVVKK 201

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BLAST of CmoCh12G010980 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.4e-29
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 1


Query: 97  GPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNS 156
           G ++G +DIGE D++Y FRVSLPGV RD+   FSC+++ +GKV + GVTTTG   V + S
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDER-YFSCEVEDNGKVLVRGVTTTGGKRVKRYS 296

Query: 157 QVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGADGILEGSVAK 204
            VF MQ+++LCPPG+FS++F+LPGPV+  +FSG FG DGILEG V K
Sbjct: 297 HVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342

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BLAST of CmoCh12G010980 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-24
Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 1


Query: 79  SSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGK 138
           S  +  V  TGTA+   +G  +G VDIG +  +YFF+V+LPGV +D  + FSC+++ DGK
Sbjct: 336 SDAEPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGE-FSCEIESDGK 395

Query: 139 VKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGADGILE 198
           V + G TT GE  + ++S+VF M  + LCPPG F + F LPGPV+   FS  F +DGI E
Sbjct: 396 VILEGSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFE 455

Query: 199 GSVAK 204
           G + +
Sbjct: 456 GVIIR 459

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BLAST of CmoCh12G010980 vs. TrEMBL
Match: A0A0A0LGB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021590 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.1e-98
Identity = 177/204 (86.76%), Postives = 194/204 (95.10%), Query Frame = 1


Query: 1   MTSPARAEDTRKNEAEPLSLRNQILDVAPINSMPYIGPPLPHSYIPS-PQAEDPEAVVNV 60
           MTSPAR E+TRKNEA+  + R +IL+VAPINSMPYIGPPLPHSYIPS P+ EDPEA+V V
Sbjct: 1   MTSPARVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKV 60

Query: 61  GPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLP 120
           GPAMVYCPLTT QEWD+IVS+TK+GV+LTGTAAMGKVGPVIGRVDIGE++NSYFFRVSLP
Sbjct: 61  GPAMVYCPLTTSQEWDDIVSATKTGVSLTGTAAMGKVGPVIGRVDIGENENSYFFRVSLP 120

Query: 121 GVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLP 180
           GVARDQTDSFSCDM+PDG+VKI GVTTTGENIVCKNSQ+FRMQSKNLCPPGHFSITFQLP
Sbjct: 121 GVARDQTDSFSCDMEPDGQVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLP 180

Query: 181 GPVNSLQFSGAFGADGILEGSVAK 204
           GPVN+LQFSGAFGADGILEGSVAK
Sbjct: 181 GPVNNLQFSGAFGADGILEGSVAK 204

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BLAST of CmoCh12G010980 vs. TrEMBL
Match: Q84KA6_CUCME (Heat shock protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.4e-82
Identity = 152/172 (88.37%), Postives = 164/172 (95.35%), Query Frame = 1


Query: 33  MPYIGPPLPHSYIPS-PQAEDPEAVVNVGPAMVYCPLTTRQEWDNIVSSTKSGVALTGTA 92
           MPYIGPPLPHSYIPS P+ EDPEA+V VGPAMVYCPLTT QEWD+IVS+TK+GV+LTGTA
Sbjct: 1   MPYIGPPLPHSYIPSSPRVEDPEAMVKVGPAMVYCPLTTSQEWDDIVSATKAGVSLTGTA 60

Query: 93  AMGKVGPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGKVKIIGVTTTGENI 152
           AMGKVGPVIGRVDI E++NSYFFRVSLPGVARDQ +SFSCDM+PDGKVKI GVTTTGENI
Sbjct: 61  AMGKVGPVIGRVDIAENENSYFFRVSLPGVARDQ-NSFSCDMEPDGKVKIRGVTTTGENI 120

Query: 153 VCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGADGILEGSVAK 204
           VCKNSQ+FRMQSKNLCPPGHFSITFQLPGPVN+LQFSGAFGADGILEGSV K
Sbjct: 121 VCKNSQIFRMQSKNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGSVGK 171

[Close]

BLAST of CmoCh12G010980 vs. TrEMBL
Match: Q6GX30_CUCME (Hsp2 (Fragment) OS=Cucumis melo GN=Hsp2 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-69
Identity = 131/151 (86.75%), Postives = 144/151 (95.36%), Query Frame = 1


Query: 44  YIPS-PQAEDPEAVVNVGPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGR 103
           +IPS P+ EDPEA+V VGPAMVYCPLTT QEWD+IVS+TK+GV+LTGTAAMGKVGPVIGR
Sbjct: 2   HIPSSPRVEDPEAMVKVGPAMVYCPLTTSQEWDDIVSATKAGVSLTGTAAMGKVGPVIGR 61

Query: 104 VDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQ 163
           VDI E++NSYFFRVSLPGVARDQ +SFSCDM+PDGKVKI GVTTTGENIVCKNSQ+FRMQ
Sbjct: 62  VDIAENENSYFFRVSLPGVARDQ-NSFSCDMEPDGKVKIRGVTTTGENIVCKNSQIFRMQ 121

Query: 164 SKNLCPPGHFSITFQLPGPVNSLQFSGAFGA 194
           SKNLCPPGHFSITFQLPGPVN+LQFSGAFGA
Sbjct: 122 SKNLCPPGHFSITFQLPGPVNNLQFSGAFGA 151

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BLAST of CmoCh12G010980 vs. TrEMBL
Match: W9QBR8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001971 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.0e-64
Identity = 122/189 (64.55%), Postives = 155/189 (82.01%), Query Frame = 1


Query: 16  EPLSLRNQILDVAPINSMPYIGPPLPHSYIPSPQAEDPEAVVNVGPAMVYCP-LTTRQEW 75
           E ++L+  IL VAP+NSMPYIGPP+P+SY  S  A+D   V  VGPA+++    TTR++W
Sbjct: 69  EKINLKRPILAVAPLNSMPYIGPPMPNSYTASLPAKDSVNVERVGPAIIFLSSFTTREDW 128

Query: 76  DNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMD 135
           DN+++S K GVALTG+AAMGK+G +IG +DIGE ++SY FRVSLPGV+RD+++ FSCD++
Sbjct: 129 DNLMASNKLGVALTGSAAMGKIGSIIGLMDIGECEDSYLFRVSLPGVSRDESE-FSCDIE 188

Query: 136 PDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGAD 195
           PDGKV I GVTTTGE IVCKNSQ+F M ++NLCPPGHFSI+FQLPGPV+  QFSG+FG D
Sbjct: 189 PDGKVLIKGVTTTGEQIVCKNSQIFHMLTRNLCPPGHFSISFQLPGPVDQQQFSGSFGTD 248

Query: 196 GILEGSVAK 204
           GILEG V K
Sbjct: 249 GILEGIVKK 256

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BLAST of CmoCh12G010980 vs. TrEMBL
Match: A0A067EWN6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025769mg PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.9e-59
Identity = 122/196 (62.24%), Postives = 150/196 (76.53%), Query Frame = 1


Query: 10  TRKNEAEPLSLRNQILDVAPINSMPYIGPPLPHSYIPSP-QAEDPEAVVNVGPAMVYCP- 69
           T  +E E  + +  +LDVAP+NSMPYIGPP P S   S  + ++ EA  NVGPAMV+ P 
Sbjct: 51  TEIDEPEHDNPQQHVLDVAPLNSMPYIGPPTPPSDFGSTSRKQETEAAENVGPAMVFLPS 110

Query: 70  LTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLPGVARDQTD 129
            +TR+E DNI++ TK+GVALTG AA+GKVG  IG VDI E D+SY FRV+LPGVARD+ D
Sbjct: 111 YSTREELDNIIAVTKTGVALTGVAALGKVGTGIGAVDIAESDDSYAFRVALPGVARDEKD 170

Query: 130 SFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNSLQF 189
            F+CD+DPDGKV I GVTTTGE  VCK +QVF+M ++NL PPGHFSI+F+LPGPVN+  F
Sbjct: 171 -FTCDIDPDGKVTIKGVTTTGEKTVCKQNQVFKMLTQNLSPPGHFSISFKLPGPVNTEDF 230

Query: 190 SGAFGADGILEGSVAK 204
           +G FG DGILEG V K
Sbjct: 231 TGKFGTDGILEGLVKK 245

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BLAST of CmoCh12G010980 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-58
Identity = 110/204 (53.92%), Postives = 153/204 (75.00%), Query Frame = 1


Query: 1   MTSPARAEDTRKNEAEPLSLRN-QILDVAPINSMPYIGPPLPHSYIPSPQAEDPEAVVNV 60
           M S +     R+N + P + RN QIL+V P+NSMPYIGP + H+ + S +  D    V  
Sbjct: 1   MRSSSGLNGMRENNSFPDNTRNPQILEVTPLNSMPYIGP-VTHASMSSNRMNDSVEKVG- 60

Query: 61  GPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLP 120
           GPAM++ P  +  E+ N++S TK+GVALTG+AAMGK+G  IG VDI E ++SY+FRV+LP
Sbjct: 61  GPAMIFLPSDSSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALP 120

Query: 121 GVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLP 180
           GV+RD+ + FSC+++PDGK+ I G TTTGE  VCK++Q+F+M ++NLCPPGHF+I FQLP
Sbjct: 121 GVSRDEKE-FSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLP 180

Query: 181 GPVNSLQFSGAFGADGILEGSVAK 204
           GPV++ +F+G FG+DG+LEG V K
Sbjct: 181 GPVSNEEFNGNFGSDGVLEGVVKK 201

[Close]

BLAST of CmoCh12G010980 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 129.4 bits (324), Expect = 2.5e-30
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 1


Query: 97  GPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNS 156
           G ++G +DIGE D++Y FRVSLPGV RD+   FSC+++ +GKV + GVTTTG   V + S
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDER-YFSCEVEDNGKVLVRGVTTTGGKRVKRYS 296

Query: 157 QVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGADGILEGSVAK 204
            VF MQ+++LCPPG+FS++F+LPGPV+  +FSG FG DGILEG V K
Sbjct: 297 HVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342

[Close]

BLAST of CmoCh12G010980 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 8.3e-26
Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 1


Query: 79  SSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGK 138
           S  +  V  TGTA+   +G  +G VDIG +  +YFF+V+LPGV +D  + FSC+++ DGK
Sbjct: 336 SDAEPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGE-FSCEIESDGK 395

Query: 139 VKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGADGILE 198
           V + G TT GE  + ++S+VF M  + LCPPG F + F LPGPV+   FS  F +DGI E
Sbjct: 396 VILEGSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFE 455

Query: 199 GSVAK 204
           G + +
Sbjct: 456 GVIIR 459

[Close]

BLAST of CmoCh12G010980 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.5e-22
Identity = 60/125 (48.00%), Postives = 75/125 (60.00%), Query Frame = 1


Query: 79  SSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGK 138
           S   S V  TGTA +G VGP IG VDIG  + +Y FRVSLPG+ ++Q D   C++  +G+
Sbjct: 13  SKVISHVFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQ-DKIKCEIQREGR 72

Query: 139 VKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGADGILE 198
           V I GV      I      ++RMQ + LCPPG FSITF LPG V+   FS  F +DGI E
Sbjct: 73  VCIQGVIPEIA-IPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFE 132

Query: 199 GSVAK 204
             V K
Sbjct: 133 VVVVK 135

[Close]

BLAST of CmoCh12G010980 vs. NCBI nr
Match: gi|778666755|ref|XP_011648803.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X1 [Cucumis sativus])

HSP 1 Score: 365.9 bits (938), Expect = 4.5e-98
Identity = 177/204 (86.76%), Postives = 194/204 (95.10%), Query Frame = 1


Query: 1   MTSPARAEDTRKNEAEPLSLRNQILDVAPINSMPYIGPPLPHSYIPS-PQAEDPEAVVNV 60
           MTSPAR E+TRKNEA+  + R +IL+VAPINSMPYIGPPLPHSYIPS P+ EDPEA+V V
Sbjct: 1   MTSPARVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKV 60

Query: 61  GPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLP 120
           GPAMVYCPLTT QEWD+IVS+TK+GV+LTGTAAMGKVGPVIGRVDIGE++NSYFFRVSLP
Sbjct: 61  GPAMVYCPLTTSQEWDDIVSATKTGVSLTGTAAMGKVGPVIGRVDIGENENSYFFRVSLP 120

Query: 121 GVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLP 180
           GVARDQTDSFSCDM+PDG+VKI GVTTTGENIVCKNSQ+FRMQSKNLCPPGHFSITFQLP
Sbjct: 121 GVARDQTDSFSCDMEPDGQVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLP 180

Query: 181 GPVNSLQFSGAFGADGILEGSVAK 204
           GPVN+LQFSGAFGADGILEGSVAK
Sbjct: 181 GPVNNLQFSGAFGADGILEGSVAK 204

[Close]

BLAST of CmoCh12G010980 vs. NCBI nr
Match: gi|659070400|ref|XP_008454874.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X1 [Cucumis melo])

HSP 1 Score: 363.6 bits (932), Expect = 2.2e-97
Identity = 176/204 (86.27%), Postives = 192/204 (94.12%), Query Frame = 1


Query: 1   MTSPARAEDTRKNEAEPLSLRNQILDVAPINSMPYIGPPLPHSYIPS-PQAEDPEAVVNV 60
           MTSPAR E+TRKNEA+  + R +IL+VAPINSMPYIGPPLPHSYIPS P+ EDPEA+V V
Sbjct: 1   MTSPARVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKV 60

Query: 61  GPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLP 120
           GPAMVYCPLTT QEWD+IVS+TK+GV+LTGTAAMGKVGPVIGRVDI E++NSYFFRVSLP
Sbjct: 61  GPAMVYCPLTTSQEWDDIVSATKAGVSLTGTAAMGKVGPVIGRVDIAENENSYFFRVSLP 120

Query: 121 GVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLP 180
           GVARDQTDSFSCDM+PDGKVKI GVTTTGENIVCKNSQ+FRMQSKNLCPPGHFSITFQLP
Sbjct: 121 GVARDQTDSFSCDMEPDGKVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLP 180

Query: 181 GPVNSLQFSGAFGADGILEGSVAK 204
           GPVN+LQFSGAFGADGILEGSV K
Sbjct: 181 GPVNNLQFSGAFGADGILEGSVGK 204

[Close]

BLAST of CmoCh12G010980 vs. NCBI nr
Match: gi|449442837|ref|XP_004139187.1| (PREDICTED: uncharacterized protein LOC101211821 isoform X2 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 1.6e-95
Identity = 175/204 (85.78%), Postives = 193/204 (94.61%), Query Frame = 1


Query: 1   MTSPARAEDTRKNEAEPLSLRNQILDVAPINSMPYIGPPLPHSYIPS-PQAEDPEAVVNV 60
           MTSPAR E+TRKNEA+  + R +IL+VAPINSMPYIGPPLPHSYIPS P+ EDPEA+V V
Sbjct: 1   MTSPARVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKV 60

Query: 61  GPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLP 120
           GPAMVYCPLTT QEWD+IVS+TK+GV+LTGTAAMGKVGPVIGRVDIGE++NSYFFRVSLP
Sbjct: 61  GPAMVYCPLTTSQEWDDIVSATKTGVSLTGTAAMGKVGPVIGRVDIGENENSYFFRVSLP 120

Query: 121 GVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLP 180
           GVARDQ +SFSCDM+PDG+VKI GVTTTGENIVCKNSQ+FRMQSKNLCPPGHFSITFQLP
Sbjct: 121 GVARDQ-NSFSCDMEPDGQVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLP 180

Query: 181 GPVNSLQFSGAFGADGILEGSVAK 204
           GPVN+LQFSGAFGADGILEGSVAK
Sbjct: 181 GPVNNLQFSGAFGADGILEGSVAK 203

[Close]

BLAST of CmoCh12G010980 vs. NCBI nr
Match: gi|659070402|ref|XP_008454882.1| (PREDICTED: uncharacterized protein LOC103495185 isoform X2 [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 7.9e-95
Identity = 174/204 (85.29%), Postives = 191/204 (93.63%), Query Frame = 1


Query: 1   MTSPARAEDTRKNEAEPLSLRNQILDVAPINSMPYIGPPLPHSYIPS-PQAEDPEAVVNV 60
           MTSPAR E+TRKNEA+  + R +IL+VAPINSMPYIGPPLPHSYIPS P+ EDPEA+V V
Sbjct: 1   MTSPARVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKV 60

Query: 61  GPAMVYCPLTTRQEWDNIVSSTKSGVALTGTAAMGKVGPVIGRVDIGEDDNSYFFRVSLP 120
           GPAMVYCPLTT QEWD+IVS+TK+GV+LTGTAAMGKVGPVIGRVDI E++NSYFFRVSLP
Sbjct: 61  GPAMVYCPLTTSQEWDDIVSATKAGVSLTGTAAMGKVGPVIGRVDIAENENSYFFRVSLP 120

Query: 121 GVARDQTDSFSCDMDPDGKVKIIGVTTTGENIVCKNSQVFRMQSKNLCPPGHFSITFQLP 180
           GVARDQ +SFSCDM+PDGKVKI GVTTTGENIVCKNSQ+FRMQSKNLCPPGHFSITFQLP
Sbjct: 121 GVARDQ-NSFSCDMEPDGKVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLP 180

Query: 181 GPVNSLQFSGAFGADGILEGSVAK 204
           GPVN+LQFSGAFGADGILEGSV K
Sbjct: 181 GPVNNLQFSGAFGADGILEGSVGK 203

[Close]

BLAST of CmoCh12G010980 vs. NCBI nr
Match: gi|28558785|gb|AAO45756.1| (heat shock protein-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 313.9 bits (803), Expect = 2.0e-82
Identity = 152/172 (88.37%), Postives = 164/172 (95.35%), Query Frame = 1


Query: 33  MPYIGPPLPHSYIPS-PQAEDPEAVVNVGPAMVYCPLTTRQEWDNIVSSTKSGVALTGTA 92
           MPYIGPPLPHSYIPS P+ EDPEA+V VGPAMVYCPLTT QEWD+IVS+TK+GV+LTGTA
Sbjct: 1   MPYIGPPLPHSYIPSSPRVEDPEAMVKVGPAMVYCPLTTSQEWDDIVSATKAGVSLTGTA 60

Query: 93  AMGKVGPVIGRVDIGEDDNSYFFRVSLPGVARDQTDSFSCDMDPDGKVKIIGVTTTGENI 152
           AMGKVGPVIGRVDI E++NSYFFRVSLPGVARDQ +SFSCDM+PDGKVKI GVTTTGENI
Sbjct: 61  AMGKVGPVIGRVDIAENENSYFFRVSLPGVARDQ-NSFSCDMEPDGKVKIRGVTTTGENI 120

Query: 153 VCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNSLQFSGAFGADGILEGSVAK 204
           VCKNSQ+FRMQSKNLCPPGHFSITFQLPGPVN+LQFSGAFGADGILEGSV K
Sbjct: 121 VCKNSQIFRMQSKNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGSVGK 171

The following BLAST results are available for this feature:

BLAST of CmoCh12G010980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IDM2L_ARATH	2.9e-57	53.92	Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22...	[more]
IDM2_ARATH	4.4e-29	57.94	Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1	[more]
IDM3_ARATH	1.5e-24	45.60	Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1	[more]

BLAST of CmoCh12G010980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGB8_CUCSA	3.1e-98	86.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021590 PE=4 SV=1	[more]
Q84KA6_CUCME	1.4e-82	88.37	Heat shock protein-like protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
Q6GX30_CUCME	1.4e-69	86.75	Hsp2 (Fragment) OS=Cucumis melo GN=Hsp2 PE=2 SV=1	[more]
W9QBR8_9ROSA	1.0e-64	64.55	Uncharacterized protein OS=Morus notabilis GN=L484_001971 PE=4 SV=1	[more]
A0A067EWN6_CITSI	2.9e-59	62.24	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025769mg PE=4 SV=1	[more]

BLAST of CmoCh12G010980 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54850.1	1.7e-58	53.92	HSP20-like chaperones superfamily protein	[more]
AT1G54840.1	2.5e-30	57.94	HSP20-like chaperones superfamily protein	[more]
AT1G20870.1	8.3e-26	45.60	HSP20-like chaperones superfamily protein	[more]
AT1G76440.1	1.5e-22	48.00	HSP20-like chaperones superfamily protein	[more]

BLAST of CmoCh12G010980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778666755\|ref\|XP_011648803.1\|	4.5e-98	86.76	PREDICTED: uncharacterized protein LOC101211821 isoform X1 [Cucumis sativus]	[more]
gi\|659070400\|ref\|XP_008454874.1\|	2.2e-97	86.27	PREDICTED: uncharacterized protein LOC103495185 isoform X1 [Cucumis melo]	[more]
gi\|449442837\|ref\|XP_004139187.1\|	1.6e-95	85.78	PREDICTED: uncharacterized protein LOC101211821 isoform X2 [Cucumis sativus]	[more]
gi\|659070402\|ref\|XP_008454882.1\|	7.9e-95	85.29	PREDICTED: uncharacterized protein LOC103495185 isoform X2 [Cucumis melo]	[more]
gi\|28558785\|gb\|AAO45756.1\|	2.0e-82	88.37	heat shock protein-like protein [Cucumis melo subsp. melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009628	response to abiotic stimulus
biological_process	GO:0006950	response to stress
biological_process	GO:0009408	response to heat
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G010980.1	CmoCh12G010980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 104..203 score: 1
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 71..198 score: 6.
None	No IPR available	PANTHER	PTHR34661	FAMILY NOT NAMED	coord: 13..204 score: 3.0
None	No IPR available	PANTHER	PTHR34661:SF3	ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN	coord: 13..204 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh12G010980	Cucsa.091630	Cucumber (Gy14) v1	cgycmoB0174
CmoCh12G010980	CmaCh12G010820	Cucurbita maxima (Rimu)	cmacmoB177
CmoCh12G010980	CmaCh05G011500	Cucurbita maxima (Rimu)	cmacmoB763
CmoCh12G010980	Cla019876	Watermelon (97103) v1	cmowmB156
CmoCh12G010980	Csa2G021580	Cucumber (Chinese Long) v2	cmocuB157
CmoCh12G010980	MELO3C004283	Melon (DHL92) v3.5.1	cmomeB161
CmoCh12G010980	ClCG02G015940	Watermelon (Charleston Gray)	cmowcgB144
CmoCh12G010980	CSPI02G03770	Wild cucumber (PI 183967)	cmocpiB159
CmoCh12G010980	Lsi11G005260	Bottle gourd (USVL1VR-Ls)	cmolsiB148
CmoCh12G010980	MELO3C004283.2	Melon (DHL92) v3.6.1	cmomedB177
CmoCh12G010980	CsaV3_2G005100	Cucumber (Chinese Long) v3	cmocucB0185
CmoCh12G010980	Cla97C02G041710	Watermelon (97103) v2	cmowmbB161
CmoCh12G010980	Bhi05G001657	Wax gourd	cmowgoB0189
CmoCh12G010980	CsGy2G003860	Cucumber (Gy14) v2	cgybcmoB170
CmoCh12G010980	Carg12891	Silver-seed gourd	carcmoB1212
CmoCh12G010980	Carg17555	Silver-seed gourd	carcmoB0973

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh12G010980	CmoCh05G011620	Cucurbita moschata (Rifu)	cmocmoB148

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh12G010980	Cucumber (Gy14) v1	cgycmoB0521
CmoCh12G010980	Wild cucumber (PI 183967)	cmocpiB147
CmoCh12G010980	Cucumber (Chinese Long) v2	cmocuB146
CmoCh12G010980	Melon (DHL92) v3.5.1	cmomeB143
CmoCh12G010980	Watermelon (Charleston Gray)	cmowcgB148
CmoCh12G010980	Watermelon (97103) v1	cmowmB143
CmoCh12G010980	Cucurbita pepo (Zucchini)	cmocpeB147
CmoCh12G010980	Cucurbita pepo (Zucchini)	cmocpeB175
CmoCh12G010980	Bottle gourd (USVL1VR-Ls)	cmolsiB168
CmoCh12G010980	Cucumber (Gy14) v2	cgybcmoB050
CmoCh12G010980	Melon (DHL92) v3.6.1	cmomedB157
CmoCh12G010980	Cucumber (Chinese Long) v3	cmocucB0169
CmoCh12G010980	Watermelon (97103) v2	cmowmbB165
CmoCh12G010980	Wax gourd	cmowgoB0229