Carg12891 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg12891
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	alpha-crystallin domain-containing protein 22.3 isoform X1
Location	Cucurbita_argyrosperma_scaffold_043 : 1016476 .. 1017292 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGATCATATTGCTCCTTGTATTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCGTACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAAGTGAGTGTTTGTTGAAACTGATCAATTTTCTCACTTCGCCACGATAATGTGCAACGTTTCGTGTTATTTGTAATATGGGCACAAGATCAGTTCTCTTTTCTGTTTTTCATTGTCGCAATCGCATTGAGTTGTGTTTGGTGCACATGAAAATTATCTATCTGACCAGACTATTGTTTCATGGCAGCAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGA

mRNA sequence

ATGTTGAGATCATATTGCTCCTTGTATTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCGTACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGA

Coding sequence (CDS)

ATGTTGAGATCATATTGCTCCTTGTATTGCAGGGTTGAGGAAACAAGAAAAAATGAGGCAGAATCATTAAATATTCGACACCGCATACTCAATGTGGCTCCCATCAATAGCATGCCATATATTGGTCCACCTCTACCACACAGCTACGTTCCTTCTTCTCCACGAGTTGAAGATCCGGAGGCTATAGTGAAGGTTGGACCAGCTATGGTATATTGTCCTCTCACGACCAGTAAAAAATGGGATCATATTGTATCTGCCTCCAAAACTGGGGTCTCCCTCACTGGGACTGCAGCCATGGGACAAGTTGGTCCAGTCATTGGACGTGTGGACATTGGCGAGAACGAGAATTCGTACTTCTTCCGTGTTTCTCTTCCAGGGGTGGCTAGAGATCAAACAGACAGCTTCAGTTGTGACATGGAGCCGGATGGGAATGTCAAAATAAAAGGAGTAACAACAACAGGGGAGAGCATAGTATGTAAGAATTCACAAGTATTTCGGATGCAATCTAGAAATCTATGCCCACCAGGTCATTTCTCTATCACTTTCCAGCTACCTGGTCCTGTCAATAACCTACAATTTTCAGGTGCTTTTGGTGCTGATGGGATTTTAGAAGGCACTGTACCTAAAAGGTGA

Protein sequence

MLRSYCSLYCRVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVYCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPKR

Homology

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BLAST of Carg12891 vs. NCBI nr
Match: XP_022946766.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 1.4e-111
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV
Sbjct: 6   RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN
Sbjct: 126 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEGTVPKR
Sbjct: 186 LQFSGAFGADGILEGTVPKR 205

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BLAST of Carg12891 vs. NCBI nr
Match: XP_023545831.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 410.6 bits (1054), Expect = 3.2e-111
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV
Sbjct: 6   RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQS+NLCPPGHFSITFQLPGPVNN
Sbjct: 126 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEGTVPKR
Sbjct: 186 LQFSGAFGADGILEGTVPKR 205

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BLAST of Carg12891 vs. NCBI nr
Match: XP_022999132.1 (alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 407.9 bits (1047), Expect = 2.1e-110
Identity = 197/200 (98.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEA+VKVGPAMV
Sbjct: 6   RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAMVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTS+KWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSQKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQS+NLCPPGHFSITFQLPGPVNN
Sbjct: 126 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEGTVPKR
Sbjct: 186 LQFSGAFGADGILEGTVPKR 205

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BLAST of Carg12891 vs. NCBI nr
Match: XP_022946767.1 (alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 403.3 bits (1035), Expect = 5.1e-109
Identity = 198/200 (99.00%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV
Sbjct: 6   RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           Q +SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN
Sbjct: 126 Q-NSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEGTVPKR
Sbjct: 186 LQFSGAFGADGILEGTVPKR 204

[Close]

BLAST of Carg12891 vs. NCBI nr
Match: XP_023545832.1 (alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.1 bits (1032), Expect = 1.1e-108
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV
Sbjct: 6   RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           Q +SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQS+NLCPPGHFSITFQLPGPVNN
Sbjct: 126 Q-NSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSKNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEGTVPKR
Sbjct: 186 LQFSGAFGADGILEGTVPKR 204

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BLAST of Carg12891 vs. TAIR10
Match: AT1G54850.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-57
Identity = 109/196 (55.61%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 16  RKNEAESLNIRH-RILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKV-GPAMVYCP 75
           R+N +   N R+ +IL V P+NSMPYIG P+ H+ + SS R+ D  ++ KV GPAM++ P
Sbjct: 11  RENNSFPDNTRNPQILEVTPLNSMPYIG-PVTHASM-SSNRMND--SVEKVGGPAMIFLP 70

Query: 76  LTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTD 135
             +S ++ +++S +KTGV+LTG+AAMG++G  IG VDI E+E+SY+FRV+LPGV+RD+ +
Sbjct: 71  SDSSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKE 130

Query: 136 SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQF 195
            FSC++EPDG + IKG TTTGE  VCK++Q+F+M ++NLCPPGHF+I FQLPGPV+N +F
Sbjct: 131 -FSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEF 190

Query: 196 SGAFGADGILEGTVPK 210
           +G FG+DG+LEG V K
Sbjct: 191 NGNFGSDGVLEGVVKK 201

[Close]

BLAST of Carg12891 vs. TAIR10
Match: AT1G54840.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 5.2e-31
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 103 GPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNS 162
           G ++G +DIGE +++Y FRVSLPGV RD+   FSC++E +G V ++GVTTTG   V + S
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDER-YFSCEVEDNGKVLVRGVTTTGGKRVKRYS 296

Query: 163 QVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPK 210
            VF MQ+R+LCPPG+FS++F+LPGPV+  +FSG FG DGILEG V K
Sbjct: 297 HVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342

[Close]

BLAST of Carg12891 vs. TAIR10
Match: AT1G20870.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.5e-27
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 85  SASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGN 144
           S ++  V  TGTA+   +G  +G VDIG N+ +YFF+V+LPGV +D  + FSC++E DG 
Sbjct: 336 SDAEPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGE-FSCEIESDGK 395

Query: 145 VKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILE 204
           V ++G TT GE  + ++S+VF M  R LCPPG F + F LPGPV+   FS  F +DGI E
Sbjct: 396 VILEGSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFE 455

Query: 205 GTV 208
           G +
Sbjct: 456 GVI 457

[Close]

BLAST of Carg12891 vs. TAIR10
Match: AT1G76440.1 (HSP20-like chaperones superfamily protein)

HSP 1 Score: 107.8 bits (268), Expect = 8.0e-24
Identity = 59/119 (49.58%), Postives = 76/119 (63.87%), Query Frame = 0


Query: 91  VSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGV 150
           V  TGTA +G VGP IG VDIG +E +Y FRVSLPG+ ++Q D   C+++ +G V I+GV
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQ-DKIKCEIQREGRVCIQGV 78

Query: 151 TTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPK 210
                +I      ++RMQ + LCPPG FSITF LPG V+   FS  F +DGI E  V K
Sbjct: 79  IPE-IAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of Carg12891 vs. Swiss-Prot
Match: sp|Q84K79|IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 GN=ACD22.3 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-56
Identity = 109/196 (55.61%), Postives = 155/196 (79.08%), Query Frame = 0


Query: 16  RKNEAESLNIRH-RILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKV-GPAMVYCP 75
           R+N +   N R+ +IL V P+NSMPYIG P+ H+ + SS R+ D  ++ KV GPAM++ P
Sbjct: 11  RENNSFPDNTRNPQILEVTPLNSMPYIG-PVTHASM-SSNRMND--SVEKVGGPAMIFLP 70

Query: 76  LTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTD 135
             +S ++ +++S +KTGV+LTG+AAMG++G  IG VDI E+E+SY+FRV+LPGV+RD+ +
Sbjct: 71  SDSSSEFSNLISQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKE 130

Query: 136 SFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQF 195
            FSC++EPDG + IKG TTTGE  VCK++Q+F+M ++NLCPPGHF+I FQLPGPV+N +F
Sbjct: 131 -FSCEIEPDGKIMIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEF 190

Query: 196 SGAFGADGILEGTVPK 210
           +G FG+DG+LEG V K
Sbjct: 191 NGNFGSDGVLEGVVKK 201

[Close]

BLAST of Carg12891 vs. Swiss-Prot
Match: sp|Q8RWL4|IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.4e-30
Identity = 62/107 (57.94%), Postives = 83/107 (77.57%), Query Frame = 0


Query: 103 GPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNS 162
           G ++G +DIGE +++Y FRVSLPGV RD+   FSC++E +G V ++GVTTTG   V + S
Sbjct: 237 GLMVGLMDIGECDDAYLFRVSLPGVKRDER-YFSCEVEDNGKVLVRGVTTTGGKRVKRYS 296

Query: 163 QVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPK 210
            VF MQ+R+LCPPG+FS++F+LPGPV+  +FSG FG DGILEG V K
Sbjct: 297 HVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTDGILEGVVMK 342

[Close]

BLAST of Carg12891 vs. Swiss-Prot
Match: sp|Q9SYQ0|IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.3e-26
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 85  SASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGN 144
           S ++  V  TGTA+   +G  +G VDIG N+ +YFF+V+LPGV +D  + FSC++E DG 
Sbjct: 336 SDAEPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGE-FSCEIESDGK 395

Query: 145 VKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILE 204
           V ++G TT GE  + ++S+VF M  R LCPPG F + F LPGPV+   FS  F +DGI E
Sbjct: 396 VILEGSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFE 455

Query: 205 GTV 208
           G +
Sbjct: 456 GVI 457

[Close]

BLAST of Carg12891 vs. TrEMBL
Match: tr|A0A0A0LGB8|A0A0A0LGB8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021590 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 1.8e-102
Identity = 182/200 (91.00%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEA+S N R RILNVAPINSMPYIGPPLPHSY+PSSPRVEDPEA+VKVGPAMV
Sbjct: 6   RVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTS++WD IVSA+KTGVSLTGTAAMG+VGPVIGRVDIGENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSQEWDDIVSATKTGVSLTGTAAMGKVGPVIGRVDIGENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           QTDSFSCDMEPDG VKI+GVTTTGE+IVCKNSQ+FRMQS+NLCPPGHFSITFQLPGPVNN
Sbjct: 126 QTDSFSCDMEPDGQVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEG+V KR
Sbjct: 186 LQFSGAFGADGILEGSVAKR 205

[Close]

BLAST of Carg12891 vs. TrEMBL
Match: tr|A0A1S3C0B8|A0A1S3C0B8_CUCME (alpha-crystallin domain-containing protein 22.3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495185 PE=3 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 4.4e-101
Identity = 180/200 (90.00%), Postives = 192/200 (96.00%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEA+S N R RILNVAPINSMPYIGPPLPHSY+PSSPRVEDPEA+VKVGPAMV
Sbjct: 6   RVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTS++WD IVSA+K GVSLTGTAAMG+VGPVIGRVDI ENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSQEWDDIVSATKAGVSLTGTAAMGKVGPVIGRVDIAENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           QTDSFSCDMEPDG VKI+GVTTTGE+IVCKNSQ+FRMQS+NLCPPGHFSITFQLPGPVNN
Sbjct: 126 QTDSFSCDMEPDGKVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEG+V KR
Sbjct: 186 LQFSGAFGADGILEGSVGKR 205

[Close]

BLAST of Carg12891 vs. TrEMBL
Match: tr|A0A1S3C0T3|A0A1S3C0T3_CUCME (alpha-crystallin domain-containing protein 22.3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495185 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.6e-98
Identity = 178/200 (89.00%), Postives = 191/200 (95.50%), Query Frame = 0


Query: 11  RVEETRKNEAESLNIRHRILNVAPINSMPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMV 70
           RVEETRKNEA+S N R RILNVAPINSMPYIGPPLPHSY+PSSPRVEDPEA+VKVGPAMV
Sbjct: 6   RVEETRKNEADSSNPRQRILNVAPINSMPYIGPPLPHSYIPSSPRVEDPEAMVKVGPAMV 65

Query: 71  YCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGRVDIGENENSYFFRVSLPGVARD 130
           YCPLTTS++WD IVSA+K GVSLTGTAAMG+VGPVIGRVDI ENENSYFFRVSLPGVARD
Sbjct: 66  YCPLTTSQEWDDIVSATKAGVSLTGTAAMGKVGPVIGRVDIAENENSYFFRVSLPGVARD 125

Query: 131 QTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNN 190
           Q +SFSCDMEPDG VKI+GVTTTGE+IVCKNSQ+FRMQS+NLCPPGHFSITFQLPGPVNN
Sbjct: 126 Q-NSFSCDMEPDGKVKIRGVTTTGENIVCKNSQIFRMQSKNLCPPGHFSITFQLPGPVNN 185

Query: 191 LQFSGAFGADGILEGTVPKR 211
           LQFSGAFGADGILEG+V KR
Sbjct: 186 LQFSGAFGADGILEGSVGKR 204

[Close]

BLAST of Carg12891 vs. TrEMBL
Match: tr|Q84KA6|Q84KA6_CUCME (Heat shock protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 5.2e-86
Identity = 155/173 (89.60%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 38  MPYIGPPLPHSYVPSSPRVEDPEAIVKVGPAMVYCPLTTSKKWDHIVSASKTGVSLTGTA 97
           MPYIGPPLPHSY+PSSPRVEDPEA+VKVGPAMVYCPLTTS++WD IVSA+K GVSLTGTA
Sbjct: 1   MPYIGPPLPHSYIPSSPRVEDPEAMVKVGPAMVYCPLTTSQEWDDIVSATKAGVSLTGTA 60

Query: 98  AMGQVGPVIGRVDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESI 157
           AMG+VGPVIGRVDI ENENSYFFRVSLPGVARDQ +SFSCDMEPDG VKI+GVTTTGE+I
Sbjct: 61  AMGKVGPVIGRVDIAENENSYFFRVSLPGVARDQ-NSFSCDMEPDGKVKIRGVTTTGENI 120

Query: 158 VCKNSQVFRMQSRNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGTVPKR 211
           VCKNSQ+FRMQS+NLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEG+V KR
Sbjct: 121 VCKNSQIFRMQSKNLCPPGHFSITFQLPGPVNNLQFSGAFGADGILEGSVGKR 172

[Close]

BLAST of Carg12891 vs. TrEMBL
Match: tr|Q6GX30|Q6GX30_CUCME (Hsp2 (Fragment) OS=Cucumis melo OX=3656 GN=Hsp2 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-72
Identity = 134/151 (88.74%), Postives = 146/151 (96.69%), Query Frame = 0


Query: 49  YVPSSPRVEDPEAIVKVGPAMVYCPLTTSKKWDHIVSASKTGVSLTGTAAMGQVGPVIGR 108
           ++PSSPRVEDPEA+VKVGPAMVYCPLTTS++WD IVSA+K GVSLTGTAAMG+VGPVIGR
Sbjct: 2   HIPSSPRVEDPEAMVKVGPAMVYCPLTTSQEWDDIVSATKAGVSLTGTAAMGKVGPVIGR 61

Query: 109 VDIGENENSYFFRVSLPGVARDQTDSFSCDMEPDGNVKIKGVTTTGESIVCKNSQVFRMQ 168
           VDI ENENSYFFRVSLPGVARDQ +SFSCDMEPDG VKI+GVTTTGE+IVCKNSQ+FRMQ
Sbjct: 62  VDIAENENSYFFRVSLPGVARDQ-NSFSCDMEPDGKVKIRGVTTTGENIVCKNSQIFRMQ 121

Query: 169 SRNLCPPGHFSITFQLPGPVNNLQFSGAFGA 200
           S+NLCPPGHFSITFQLPGPVNNLQFSGAFGA
Sbjct: 122 SKNLCPPGHFSITFQLPGPVNNLQFSGAFGA 151

The following BLAST results are available for this feature:

BLAST of Carg12891 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946766.1	1.4e-111	100.00	alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita mosch...	[more]
XP_023545831.1	3.2e-111	99.50	alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita pepo ...	[more]
XP_022999132.1	2.1e-110	98.50	alpha-crystallin domain-containing protein 22.3-like isoform X1 [Cucurbita maxim...	[more]
XP_022946767.1	5.1e-109	99.00	alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita mosch...	[more]
XP_023545832.1	1.1e-108	98.50	alpha-crystallin domain-containing protein 22.3-like isoform X2 [Cucurbita pepo ...	[more]

BLAST of Carg12891 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G54850.1	1.1e-57	55.61	HSP20-like chaperones superfamily protein	[more]
AT1G54840.1	5.2e-31	57.94	HSP20-like chaperones superfamily protein	[more]
AT1G20870.1	3.5e-27	47.97	HSP20-like chaperones superfamily protein	[more]
AT1G76440.1	8.0e-24	49.58	HSP20-like chaperones superfamily protein	[more]

BLAST of Carg12891 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84K79\|IDM2L_ARATH	2.0e-56	55.61	Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q8RWL4\|IDM2_ARATH	9.4e-30	57.94	Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1	[more]
sp\|Q9SYQ0\|IDM3_ARATH	6.3e-26	47.97	Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1	[more]

BLAST of Carg12891 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGB8\|A0A0A0LGB8_CUCSA	1.8e-102	91.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G021590 PE=3 SV=1	[more]
tr\|A0A1S3C0B8\|A0A1S3C0B8_CUCME	4.4e-101	90.00	alpha-crystallin domain-containing protein 22.3 isoform X1 OS=Cucumis melo OX=36...	[more]
tr\|A0A1S3C0T3\|A0A1S3C0T3_CUCME	1.6e-98	89.00	alpha-crystallin domain-containing protein 22.3 isoform X2 OS=Cucumis melo OX=36...	[more]
tr\|Q84KA6\|Q84KA6_CUCME	5.2e-86	89.60	Heat shock protein-like protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|Q6GX30\|Q6GX30_CUCME	1.5e-72	88.74	Hsp2 (Fragment) OS=Cucumis melo OX=3656 GN=Hsp2 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR039321	IDM2/3-like
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg12891-RA	Carg12891-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 76..210 e-value: 5.1E-11 score: 44.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 95..209
IPR039321	Increased DNA methylation 2/3-like	PANTHER	PTHR34661	FAMILY NOT NAMED	coord: 12..210
None	No IPR available	PANTHER	PTHR34661:SF3	ALPHA-CRYSTALLIN DOMAIN-CONTAINING PROTEIN 22.3-RELATED	coord: 12..210
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 110..209 e-value: 1.78183E-9 score: 51.0157
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 97..210 score: 12.967

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg12891	Cla019876	Watermelon (97103) v1	carwmB0907
Carg12891	Csa2G021580	Cucumber (Chinese Long) v2	carcuB0917
Carg12891	MELO3C004283	Melon (DHL92) v3.5.1	carmeB0893
Carg12891	ClCG02G015940	Watermelon (Charleston Gray)	carwcgB0883
Carg12891	CSPI02G03770	Wild cucumber (PI 183967)	carcpiB0938
Carg12891	Cucsa.091630	Cucumber (Gy14) v1	carcgyB1020
Carg12891	CmaCh12G010820	Cucurbita maxima (Rimu)	carcmaB1241
Carg12891	CmaCh05G011500	Cucurbita maxima (Rimu)	carcmaB1246
Carg12891	CmoCh12G010980	Cucurbita moschata (Rifu)	carcmoB1212
Carg12891	Lsi11G005260	Bottle gourd (USVL1VR-Ls)	carlsiB822
Carg12891	CsGy2G003860	Cucumber (Gy14) v2	carcgybB0890
Carg12891	MELO3C004283.2	Melon (DHL92) v3.6.1	carmedB0900
Carg12891	CsaV3_2G005100	Cucumber (Chinese Long) v3	carcucB0940
Carg12891	Cla97C02G041710	Watermelon (97103) v2	carwmbB0946
Carg12891	Bhi05G001657	Wax gourd	carwgoB1046

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg12891	Carg17555	Silver-seed gourd	carcarB587

The following block(s) are covering this gene:


Gene	Organism	Block
Carg12891	Cucurbita moschata (Rifu)	carcmoB1216
Carg12891	Cucurbita pepo (Zucchini)	carcpeB1252
Carg12891	Cucurbita pepo (Zucchini)	carcpeB1256
Carg12891	Watermelon (97103) v2	carwmbB0949