Carg11210 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11210
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Structural constituent of ribosome, putative
Location	Cucurbita_argyrosperma_scaffold_013 : 603896 .. 606249 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTTTCAGCAATCTCCCCGCTTCCTTTGGCTGTCTCCTTTGGCTTCCACCGCCCTCAACGTCCAACCACGCCTGCTCCCCGCTTTTCCTATTCTTTTGCTTCTTTGAGCTCCTCTTCTTCCGGATCCCAATCTGCCAAACCTTCTTCGCCCACCGATAACTCCAATGGAACTTCATCTCCCTTCGTTGAACCCTCCAGAGCCGCGGATTCGAATTTCAGCTACGCGTTTGCTAACCCTAGCGCTGGCGGTGCTGCTCTTCACCCGATTCTAGGCTTTATGCAATCCACTGAGTCCTCAATTGAGAGGGTAATTGTTCTTTTTTTTTTTTTCTGTTGATGCTGAAAATTTGTGCTGGCTGTGAATTTAATCCGTAAACACTTTGGAACTGAACTCGTATACTGATACAATTATTTGAATGATTCATTCTGTCTCTTTTAGTTCGTATGGTTCAAGTATGTTTAAATTAAGCTTTTAGTCAATTGGATCGAATAATTGCAGAGTTGATGGGGCTGATATCACAAGAGATACCCATTAGGATGATTTCAAATGTTATTCTTAAATTTTAAAAAAATTTGGATTGCTTATGCGAGGTTGATTTCTTCTATTGTATTCGTCTTTTATTCTTTTTCAACCTGATCAGTTCAGTTCTTTAATGGGCTAATGACCATGCCTATCTCATCTGATGTTAAGCAGGTTATTTTTGACTTCCGTTTCTTGGCGCTGCTTGCTGTTGGGGGTTCATTGGCGGGTTCATTCTTGTGCTTTCTCAATGTACTTTCTCCAGCTCTTAGGACTCAGATAAAGTTTTCTTTTGTATGATACTTTAATTGTTTGTGTAGTTTGACTAGTCTTAGCTTGTCTGAAGGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGGATTCACACCGGACAAATGGTTCTGCGACTTGTTGAAGCTATTGGTAGGATCCTCTCCTATATTCACTACTGCATCTCTTTTTTTGTGCTGGAAGTACAGCTGCTAATTGCACTTCAAAGCATGAAAACGATAATGAATTGCTACCTCATGCAGATGTATATCTCGCTGGAACCGTCATGTTAATCTTTGGGATGGGCCTATATGGATTGTTTATCAGTAATGTGTCTCCTGATGAACCTCCTCCTGTTGATCGTGCCCTGAAAGGATCCTCACTGTTTGGAATGTTTGCCTTGAAGGTAAATGACTAAGTTGATAGGTTAGGATACTTGTAACCTTTCTTTTAGTTTGGGTGTAGGTATTAGTTTGATTCACAAAGTCGTAACACATGAACTACTAGTATTTATTAAGGAGAAAATAACGTTGTCAGGGTTGAACTTCAACCTTATGGTATGATATCATGTTAAATAACTTAGACCCCAGCATTAATAGATATTGTCTGCTTTGGCTCGTTACGTATCACCGTCAACCTCACGGTTTTAAAACGCGTTTATTATAGAGAGATTTCCACTCTTATAAGGAATGTTTCGTTTTCCTCTCCAACCGATGTGGGATCTCACAATCCACTCCCTTGAGGGCCCAGCGTCCTCACTAGCACACCACCCGTTGCCTGACTTTGATACCATTTGTAACAGCTCAAGCCCACCGCTAATAAATATTGTTTATTTTGCTCCGTTACGTATTGCCATCAGCCTCACGATTTTAAAACGCATCTACTATAGAGAGGTTTTTGCAATGTTTTGTTCTCCTCTCCAGCCCAATGTAGGATCTCACACCTTTACCGGAAAAAAGAATCACCGCTAGATCCAAAAGCTTGAGTATAGTTTAACGTATATTTATTTATTCATGTCATTTGATGGAAATTGACAAAACTCAGAATAGAATGGTTGTATGCTGAAACTTGAACTCCCCTGAAGAAAATCTAAGATTCCAACAGTGCTGAATGCTGTAAACTTGAGAAAATCTTTGATATTCTATGGAGATTATTGTCTGGACATTATTCAGCGAGCATGGAAATCTTAGTGTTTGTTTATGCTGTCCTGAAACTTCTGGAACAGAGAATGGAATATGAGCTTTTACTTTTTTGAATTTGTTGTTCCCTCATGGACGGCATTTGTGATTTTGGTGTCATTGGTTGCAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGCTGAAAACAAAGGTCGGACATGTTATCGTCATGATTCTCTTAGTGAAAATGTTCGAGAGAAGCAAGATGGTGACGATAGCAACCGGTCTCGATCTACTGAGTTATTCGGTCTGCATCTTCCTGTCATCTGCTTCTTTATACATCCTCCATAACCTACACAGGCCAGAACAGGAACACAAAGTAGTATAA

mRNA sequence

ATGGCGCTTTCAGCAATCTCCCCGCTTCCTTTGGCTGTCTCCTTTGGCTTCCACCGCCCTCAACGTCCAACCACGCCTGCTCCCCGCTTTTCCTATTCTTTTGCTTCTTTGAGCTCCTCTTCTTCCGGATCCCAATCTGCCAAACCTTCTTCGCCCACCGATAACTCCAATGGAACTTCATCTCCCTTCGTTGAACCCTCCAGAGCCGCGGATTCGAATTTCAGCTACGCGTTTGCTAACCCTAGCGCTGGCGGTGCTGCTCTTCACCCGATTCTAGGCTTTATGCAATCCACTGAGTCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCGCTGCTTGCTGTTGGGGGTTCATTGGCGGGTTCATTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGGATTCACACCGGACAAATGGTTCTGCGACTTGTTGAAGCTATTGATGTATATCTCGCTGGAACCGTCATGTTAATCTTTGGGATGGGCCTATATGGATTGTTTATCAGTAATGTGTCTCCTGATGAACCTCCTCCTGTTGATCGTGCCCTGAAAGGATCCTCACTGTTTGGAATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGCTGAAAACAAAGGTCGGACATGTTATCGTCATGATTCTCTTAGTGAAAATGTTCGAGAGAAGCAAGATGGTGACGATAGCAACCGGTCTCGATCTACTGAGTTATTCGGTCTGCATCTTCCTGTCATCTGCTTCTTTATACATCCTCCATAACCTACACAGGCCAGAACAGGAACACAAAGTAGTATAA

Coding sequence (CDS)

ATGGCGCTTTCAGCAATCTCCCCGCTTCCTTTGGCTGTCTCCTTTGGCTTCCACCGCCCTCAACGTCCAACCACGCCTGCTCCCCGCTTTTCCTATTCTTTTGCTTCTTTGAGCTCCTCTTCTTCCGGATCCCAATCTGCCAAACCTTCTTCGCCCACCGATAACTCCAATGGAACTTCATCTCCCTTCGTTGAACCCTCCAGAGCCGCGGATTCGAATTTCAGCTACGCGTTTGCTAACCCTAGCGCTGGCGGTGCTGCTCTTCACCCGATTCTAGGCTTTATGCAATCCACTGAGTCCTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCGCTGCTTGCTGTTGGGGGTTCATTGGCGGGTTCATTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCAAGCTGTGTCAAAGGGATTCACACCGGACAAATGGTTCTGCGACTTGTTGAAGCTATTGATGTATATCTCGCTGGAACCGTCATGTTAATCTTTGGGATGGGCCTATATGGATTGTTTATCAGTAATGTGTCTCCTGATGAACCTCCTCCTGTTGATCGTGCCCTGAAAGGATCCTCACTGTTTGGAATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCTCTTGATGAGCTGAAAACAAAGGTCGGACATGTTATCGTCATGATTCTCTTAGTGAAAATGTTCGAGAGAAGCAAGATGGTGACGATAGCAACCGGTCTCGATCTACTGAGTTATTCGGTCTGCATCTTCCTGTCATCTGCTTCTTTATACATCCTCCATAACCTACACAGGCCAGAACAGGAACACAAAGTAGTATAA

Protein sequence

MALSAISPLPLAVSFGFHRPQRPTTPAPRFSYSFASLSSSSSGSQSAKPSSPTDNSNGTSSPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQEHKVV

Homology

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BLAST of Carg11210 vs. NCBI nr
Match: XP_022934188.1 (uncharacterized protein LOC111441432 [Cucurbita moschata])

HSP 1 Score: 485.0 bits (1247), Expect = 1.8e-133
Identity = 272/286 (95.10%), Postives = 273/286 (95.45%), Query Frame = 0


Query: 1   MALSAISPLPLAVSFGFHRPQRPTTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTS 60
           MA SAISPLPL VSFGFHRPQRPTT A       XXXXXXXXXXXXXXXXXXXX  NGTS
Sbjct: 1   MAFSAISPLPLTVSFGFHRPQRPTTAAPRFSYSFXXXXXXXXXXXXXXXXXXXXNSNGTS 60

Query: 61  SPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGGS 120
           +PFVEPSRAADSNFSYAFANPSAGG ALHPILGFMQSTESSIERVIFDFRFLALLAVGGS
Sbjct: 61  APFVEPSRAADSNFSYAFANPSAGGGALHPILGFMQSTESSIERVIFDFRFLALLAVGGS 120

Query: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180
           LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY
Sbjct: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180

Query: 181 GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240
           GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK
Sbjct: 181 GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240

Query: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQEHKVV 287
           MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQEHKVV
Sbjct: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQEHKVV 286

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BLAST of Carg11210 vs. NCBI nr
Match: XP_022983902.1 (uncharacterized protein LOC111482385 [Cucurbita maxima])

HSP 1 Score: 472.6 bits (1215), Expect = 9.3e-130
Identity = 269/280 (96.07%), Postives = 270/280 (96.43%), Query Frame = 0


Query: 1   MALSAISPLPLAVSFGFHRPQRPTTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTS 60
           MALS ISPLPLAVSFGFHRPQRPT  A      XXXXXXXXXXXXXXXXXXXXXXXNGTS
Sbjct: 1   MALSVISPLPLAVSFGFHRPQRPTAAAPRFFYSXXXXXXXXXXXXXXXXXXXXXXXNGTS 60

Query: 61  SPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGGS 120
           +PFVEPSRAADSNFSYAFANPSAGG ALHPILGFMQSTESSIERVIFDFRFLALLAVGGS
Sbjct: 61  APFVEPSRAADSNFSYAFANPSAGGGALHPILGFMQSTESSIERVIFDFRFLALLAVGGS 120

Query: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180
           LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY
Sbjct: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180

Query: 181 GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240
           GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK
Sbjct: 181 GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240

Query: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 281
           MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 280

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BLAST of Carg11210 vs. NCBI nr
Match: XP_023526555.1 (uncharacterized protein LOC111790025 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455.7 bits (1171), Expect = 1.2e-124
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 1   MALSAISPLPLAVSFGFHRPQRPTTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTS 60
           MALSAISPLPLAVSF            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX GTS
Sbjct: 1   MALSAISPLPLAVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTS 60

Query: 61  SPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGGS 120
           SPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGGS
Sbjct: 61  SPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGGS 120

Query: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180
           LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY
Sbjct: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180

Query: 181 GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240
           GLFISNVSPDE PPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK
Sbjct: 181 GLFISNVSPDELPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240

Query: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQEHKVV 287
           MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQEHKVV
Sbjct: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQEHKVV 286

[Close]

BLAST of Carg11210 vs. NCBI nr
Match: XP_022152702.1 (uncharacterized protein LOC111020358 [Momordica charantia])

HSP 1 Score: 433.3 bits (1113), Expect = 6.3e-118
Identity = 241/280 (86.07%), Postives = 243/280 (86.79%), Query Frame = 0


Query: 1   MALSAISPLPLAVSFGFHRPQRPTTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGTS 60
           MALSAIS  P AVS GFHRP     P          XXXXXXXXXX          NGTS
Sbjct: 1   MALSAISTAPFAVSLGFHRPVGRRLP--YPCASLSSXXXXXXXXXXSSPTDNVVSSNGTS 60

Query: 61  SPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGGS 120
           +P VEPSRAADSNF+YAFANPS GG A H ILGFMQSTESSIER IFDFRFLALLAVGGS
Sbjct: 61  APLVEPSRAADSNFNYAFANPSGGGGAFHSILGFMQSTESSIERAIFDFRFLALLAVGGS 120

Query: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180
           LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY
Sbjct: 121 LAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLY 180

Query: 181 GLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240
           GLFISNVSPD PP VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK
Sbjct: 181 GLFISNVSPDAPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVK 240

Query: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 281
           MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 MFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 278

[Close]

BLAST of Carg11210 vs. NCBI nr
Match: XP_008461820.1 (PREDICTED: uncharacterized protein LOC103500330 [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 8.5e-115
Identity = 255/287 (88.85%), Postives = 258/287 (89.90%), Query Frame = 0


Query: 1   MALSAISPLPLAVSFGFHRPQRPTT-----PAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA SA SPLP  VS GF RPQ PTT           XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSAXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XNGTSSP-FVEPSRAADSNFSYAFANPS-AGGAALHPILGFMQSTESSIERVIFDFRFLA 120
           XNGT+ P FVEPS   DSNF YAF NP+ A  A+LHPILGFMQSTESSIERVIFDFRFLA
Sbjct: 61  XNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 120

Query: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180
           LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML
Sbjct: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180

Query: 181 IFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240
           IFGMGLYGLFISNVSPDEPP VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI
Sbjct: 181 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240

Query: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 281
           VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 287

[Close]

BLAST of Carg11210 vs. TAIR10
Match: AT5G13720.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 323.2 bits (827), Expect = 1.7e-88
Identity = 164/191 (85.86%), Postives = 175/191 (91.62%), Query Frame = 0


Query: 90  PILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKG 149
           P   F +STES++ER+IFDFRFLALLAVGGSLAGS LCFLNGCVYI +AYKVYW++C KG
Sbjct: 71  PFAQFFRSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKG 130

Query: 150 IHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFA 209
           IHTGQMVLRLVEAIDVYLAGTVMLIF MGLYGLFIS+   D PP  DRAL+ SSLFGMFA
Sbjct: 131 IHTGQMVLRLVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPESDRALRSSSLFGMFA 190

Query: 210 LKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSAS 269
           +KERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSAS
Sbjct: 191 MKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSAS 250

Query: 270 LYILHNLHRPE 281
           LYILHNLH+ E
Sbjct: 251 LYILHNLHKGE 261

[Close]

BLAST of Carg11210 vs. TAIR10
Match: AT4G19390.1 (Uncharacterised protein family (UPF0114))

HSP 1 Score: 179.1 bits (453), Expect = 3.9e-45
Identity = 92/182 (50.55%), Postives = 126/182 (69.23%), Query Frame = 0


Query: 96  QSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQM 155
           ++ E  IE+VI+  RF+  L   GSL GS LCF+ GC+Y+ D++  Y       ++ G++
Sbjct: 95  EALEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------SVNRGKV 154

Query: 156 VLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPK 215
           +  LVEAID+YL GTVML+FG+GLY LFISN+   E    D     SSLFGMF LKERP+
Sbjct: 155 IFLLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERPQ 214

Query: 216 WMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHN 275
           W+++ S+ ELKTK+GHVIVM+LL+ +F++SK V I +  DLL  SV IF SSA L++L  
Sbjct: 215 WLEVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLSR 270

Query: 276 LH 278
           L+
Sbjct: 275 LN 270

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BLAST of Carg11210 vs. TrEMBL
Match: tr|A0A1S3CFG0|A0A1S3CFG0_CUCME (uncharacterized protein LOC103500330 OS=Cucumis melo OX=3656 GN=LOC103500330 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 5.6e-115
Identity = 255/287 (88.85%), Postives = 258/287 (89.90%), Query Frame = 0


Query: 1   MALSAISPLPLAVSFGFHRPQRPTT-----PAXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA SA SPLP  VS GF RPQ PTT           XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSAXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XNGTSSP-FVEPSRAADSNFSYAFANPS-AGGAALHPILGFMQSTESSIERVIFDFRFLA 120
           XNGT+ P FVEPS   DSNF YAF NP+ A  A+LHPILGFMQSTESSIERVIFDFRFLA
Sbjct: 61  XNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 120

Query: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180
           LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML
Sbjct: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180

Query: 181 IFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240
           IFGMGLYGLFISNVSPDEPP VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI
Sbjct: 181 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240

Query: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 281
           VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 287

[Close]

BLAST of Carg11210 vs. TrEMBL
Match: tr|A0A0A0LCC7|A0A0A0LCC7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G687750 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.1e-110
Identity = 251/289 (86.85%), Postives = 257/289 (88.93%), Query Frame = 0


Query: 1   MALSAISPLPLAVSFGFHRPQRPTT-------PAXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MA SA SPLP  +S GF RPQ PTT       P XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MAFSAFSPLPFPLSLGFRRPQSPTTAFPRLPFPIXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXNGTSSP-FVEPSRAADSNFSYAFANPS-AGGAALHPILGFMQSTESSIERVIFDFRF 120
           XXX    SP FV+PS    SNF+YAF NP+    A+LHPILGFMQS ESSIERVIFDFRF
Sbjct: 61  XXXXXXXSPSFVDPSTPPHSNFTYAFPNPTPPASASLHPILGFMQSAESSIERVIFDFRF 120

Query: 121 LALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180
           LAL AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Sbjct: 121 LALFAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180

Query: 181 MLIFGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240
           MLIFGMGLYGLFISNVSPDEPP VDRAL+GSSLFGMFALKERPKWMKISSLDELKTKVGH
Sbjct: 181 MLIFGMGLYGLFISNVSPDEPPSVDRALQGSSLFGMFALKERPKWMKISSLDELKTKVGH 240

Query: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 281
           VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289

[Close]

BLAST of Carg11210 vs. TrEMBL
Match: tr|A0A067L571|A0A067L571_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16864 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.1e-97
Identity = 190/223 (85.20%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 60  SSPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGG 119
           S+ FVE SR  DS+F+YA ANP+      +P + F++STES+IERVIFDFRFLALLA+GG
Sbjct: 62  STTFVESSRTHDSSFNYALANPTGN----NPFVRFVRSTESNIERVIFDFRFLALLAIGG 121

Query: 120 SLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGL 179
           SLAGS LCFLNGCVYI DAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGL
Sbjct: 122 SLAGSLLCFLNGCVYIFDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGL 181

Query: 180 YGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLV 239
           YGLFISNV PD  P VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLV
Sbjct: 182 YGLFISNVPPDVSPQVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLV 241

Query: 240 KMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPEQE 283
           KMFERSKMVTIATG DLLSYSVCIFLSSASLYILHNLH+ E E
Sbjct: 242 KMFERSKMVTIATGTDLLSYSVCIFLSSASLYILHNLHKSESE 280

[Close]

BLAST of Carg11210 vs. TrEMBL
Match: tr|B9RVJ9|B9RVJ9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0963860 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.0e-96
Identity = 184/221 (83.26%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 60  SSPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLALLAVGG 119
           S PF E SR+ +S+F+YAFANPS       P++ F++STES+IER+IFDFRFLALLAVGG
Sbjct: 67  SKPFAESSRSHNSSFNYAFANPSGSS----PVVQFVRSTESNIERIIFDFRFLALLAVGG 126

Query: 120 SLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGL 179
           SLAGS LCFLNGCVYI DAYKVYW+SC KG+HTGQMVLRLVEAIDVYLAGTVMLIFGMGL
Sbjct: 127 SLAGSLLCFLNGCVYIVDAYKVYWTSCCKGVHTGQMVLRLVEAIDVYLAGTVMLIFGMGL 186

Query: 180 YGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLV 239
           YGLFISNV PD  P VDRALKGSSLFGMFALKERPKWMKI SLDELKTKVGHVIVMILLV
Sbjct: 187 YGLFISNVPPDVAPQVDRALKGSSLFGMFALKERPKWMKICSLDELKTKVGHVIVMILLV 246

Query: 240 KMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 281
           KMFERSKMVTIATG+DLLSYS+CIFLSSASLYILHNLH+ +
Sbjct: 247 KMFERSKMVTIATGMDLLSYSICIFLSSASLYILHNLHKSD 283

[Close]

BLAST of Carg11210 vs. TrEMBL
Match: tr|A0A022QEF2|A0A022QEF2_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011748mg PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.2e-95
Identity = 188/226 (83.19%), Postives = 201/226 (88.94%), Query Frame = 0


Query: 57  NGTS--SPFVEPSRAADSNFSYAFANPSAGGAALHPILGFMQSTESSIERVIFDFRFLAL 116
           NG+S  +PFVEPS+  +S +SYA ANP+       P++ FMQSTES+IERVIFDFRFLAL
Sbjct: 52  NGSSPKAPFVEPSKQPESPYSYALANPNGS-----PVVQFMQSTESTIERVIFDFRFLAL 111

Query: 117 LAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLI 176
           LAVGGSLAGS LCFLNGCVYI DAYKVYWSSCVKG+HTG+MVLRLVEAIDVYLAGTVMLI
Sbjct: 112 LAVGGSLAGSLLCFLNGCVYIFDAYKVYWSSCVKGVHTGKMVLRLVEAIDVYLAGTVMLI 171

Query: 177 FGMGLYGLFISNVSPDEPPPVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIV 236
           FGMGLYGLFISNV  D P   DRAL GSSLFGMFALKERPKWMKISSLDELKTKVGHVIV
Sbjct: 172 FGMGLYGLFISNVPNDVPSANDRALTGSSLFGMFALKERPKWMKISSLDELKTKVGHVIV 231

Query: 237 MILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 281
           MILLVKMFERSKMVTI TGLDLLSYSVCIFLSSASLYILHNLH+ +
Sbjct: 232 MILLVKMFERSKMVTITTGLDLLSYSVCIFLSSASLYILHNLHKSD 272

The following BLAST results are available for this feature:

BLAST of Carg11210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022934188.1	1.8e-133	95.10	uncharacterized protein LOC111441432 [Cucurbita moschata]	[more]
XP_022983902.1	9.3e-130	96.07	uncharacterized protein LOC111482385 [Cucurbita maxima]	[more]
XP_023526555.1	1.2e-124	95.10	uncharacterized protein LOC111790025 [Cucurbita pepo subsp. pepo]	[more]
XP_022152702.1	6.3e-118	86.07	uncharacterized protein LOC111020358 [Momordica charantia]	[more]
XP_008461820.1	8.5e-115	88.85	PREDICTED: uncharacterized protein LOC103500330 [Cucumis melo]	[more]

BLAST of Carg11210 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G13720.1	1.7e-88	85.86	Uncharacterised protein family (UPF0114)	[more]
AT4G19390.1	3.9e-45	50.55	Uncharacterised protein family (UPF0114)	[more]

BLAST of Carg11210 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg11210 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CFG0\|A0A1S3CFG0_CUCME	5.6e-115	88.85	uncharacterized protein LOC103500330 OS=Cucumis melo OX=3656 GN=LOC103500330 PE=...	[more]
tr\|A0A0A0LCC7\|A0A0A0LCC7_CUCSA	1.1e-110	86.85	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G687750 PE=4 SV=1	[more]
tr\|A0A067L571\|A0A067L571_JATCU	1.1e-97	85.20	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16864 PE=4 SV=1	[more]
tr\|B9RVJ9\|B9RVJ9_RICCO	2.0e-96	83.26	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0963860 PE=4 SV=1	[more]
tr\|A0A022QEF2\|A0A022QEF2_ERYGU	2.2e-95	83.19	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a011748mg PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005134	UPF0114
IPR016804	UPF0114_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11210-RA	Carg11210-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016804	Uncharacterised protein family UPF0114, plant	PIRSF	PIRSF022348	UCP022348	coord: 1..281 e-value: 1.8E-120 score: 399.4
IPR005134	Uncharacterised protein family UPF0114	PFAM	PF03350	UPF0114	coord: 106..244 e-value: 9.1E-38 score: 129.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..65
None	No IPR available	PANTHER	PTHR31721:SF1	SUBFAMILY NOT NAMED	coord: 28..282
None	No IPR available	PANTHER	PTHR31721	FAMILY NOT NAMED	coord: 28..282

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11210	Cla017284	Watermelon (97103) v1	carwmB0816
Carg11210	Csa3G687750	Cucumber (Chinese Long) v2	carcuB0829
Carg11210	MELO3C023994	Melon (DHL92) v3.5.1	carmeB0811
Carg11210	ClCG10G012200	Watermelon (Charleston Gray)	carwcgB0792
Carg11210	CSPI03G29530	Wild cucumber (PI 183967)	carcpiB0850
Carg11210	Cucsa.248930	Cucumber (Gy14) v1	carcgyB0933
Carg11210	CmaCh01G002380	Cucurbita maxima (Rimu)	carcmaB1134
Carg11210	CmaCh14G009870	Cucurbita maxima (Rimu)	carcmaB1132
Carg11210	CmoCh01G002470	Cucurbita moschata (Rifu)	carcmoB1105
Carg11210	CmoCh14G010100	Cucurbita moschata (Rifu)	carcmoB1102
Carg11210	Lsi03G011950	Bottle gourd (USVL1VR-Ls)	carlsiB748
Carg11210	Cp4.1LG02g15590	Cucurbita pepo (Zucchini)	carcpeB1146
Carg11210	Cp4.1LG03g04630	Cucurbita pepo (Zucchini)	carcpeB1147
Carg11210	CsGy3G027370	Cucumber (Gy14) v2	carcgybB0802
Carg11210	MELO3C023994.2	Melon (DHL92) v3.6.1	carmedB0822
Carg11210	CsaV3_3G031980	Cucumber (Chinese Long) v3	carcucB0853
Carg11210	Cla97C10G195020	Watermelon (97103) v2	carwmbB0851
Carg11210	Bhi11G001163	Wax gourd	carwgoB0951

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11210	Carg07333	Silver-seed gourd	carcarB605

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11210	Silver-seed gourd	carcarB454
Carg11210	Cucumber (Gy14) v2	carcgybB0808
Carg11210	Cucurbita maxima (Rimu)	carcmaB1133
Carg11210	Cucurbita maxima (Rimu)	carcmaB1136
Carg11210	Cucurbita moschata (Rifu)	carcmoB1107
Carg11210	Cucurbita pepo (Zucchini)	carcpeB1145
Carg11210	Bottle gourd (USVL1VR-Ls)	carlsiB747
Carg11210	Melon (DHL92) v3.5.1	carmeB0809
Carg11210	Melon (DHL92) v3.6.1	carmedB0820
Carg11210	Watermelon (Charleston Gray)	carwcgB0791
Carg11210	Watermelon (97103) v2	carwmbB0852