MELO3C023994 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C023994
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionStructural constituent of ribosome, putative
Locationchr4 : 23833533 .. 23836912 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGATTTTGCAATTTGTAAGAGAAAAAAGTAAAAAAAAGGAAAAAAGAAAGATGATTTCGTTGGGACACTGTTTTTGGCGGTAAAATCAGTCATAGTCAGAGAGCTTAGACTCAAAGAGAGAATGAGACACAAAAATGTCCATTTCAAAGCTTCAAGATCTGAATGATGATGAAGATGAAGAACAAGAAGATCAATAAAAAATATCTTCTTTCCAAATAAATATCCTCTTCGTTCTCATTTCTCTTTTCTCCACACTCCAATTTCCCATTCCAATGGCGTTTTCTGCTTTCTCCCCTCTTCCATTCCCCGTCTCCTTAGGGTTCCGCCGCCCTCAATCTCCCACCACCGCCTTTCCTCGCCTTTCCTTCCCTGTTTCTGCTTCTTTGAGCTCTTCCTCTTCTGAATCTAAATCCGCTAAATCATCCTCCCCCACCGATAATCTTGTTTCCTCCTCAAATGGAACTACTCCCCCTTCCTTTGTTGAACCCTCCACACCTCCTGACTCTAATTTCCCTTACGCATTTCCTAACCCTACTCCTGCTGCGTCTGCTTCTCTTCACCCCATTCTTGGGTTTATGCAATCCACTGAATCTTCAATTGAGAGGGTAATTCTTCTTTTTCCTTTTCTTTTTCAATTGGGTTTTTTCTTTTTATATGTTGCTTAGTTTCCCTGTTGAAGCTCAAAGTTTGTACTGGCTGTAAATTTAATCAGTTAACATACTGTTGCTATTACTTGAGAGTATGGCAATTGAGCACATAAAGCTTTGAATGATTTGCTTATTCGAGTTCCAATGTGTTAAGGAATCGACATATAAAGAAAACAATAGAGAACGACACAGAGATATATGTGTTCACTGATATTGCGTCACCTACATTCACAGGTGAAAGGAGAACGGTTAATTGCTAAAGGAGAATTAGAATTACCAACTAGTTTACATTGTGCAATTCTCAAAATCTAGTATCAAAATCGTAAATAACAAATATGGAAAATACAATTCAGTCAGACGCTGTACTTGGCTATTTGCTAGATATCAGATTCAAGGCATTCTAACACTATGGTTCTAATATGTTCGAATTGAACTTATGCAATTGGATAATTAGATTTTTTATGTGAGGTTGATTTCTTCTTTTTCTAGTCTAATCTTTCATTTCTTAGATGGGCTAATGACTATTACCTGTTTCACTGTTGTTAAGCAGGTTATTTTTGACTTCCGTTTCTTGGCCCTGCTTGCGGTTGGGGGTTCACTGGCGGGTTCATTCTTGTGCTTTCTCAATGTACTTTCTTCAGCTCTCCTTAAAACTAGTTCACTACAGAAGTTTTTGGATACTACATATTATAATAAATTATTTTAACTATGCAACTGAATTCCTTTCGGATGACGTTCTGAATATTTATTGAAGATAAATCGTGCACACATTTTTCTATTGGAACATTTTCTTTTGTGTGATACTTAATTGCACATGTAGATTGACTACTCTTAGCTTGTCTGAAGGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCTAGCTGTGTCAAAGGAATTCACACCGGACAAATGGTTTTGCGACTTGTTGAAGCTATCGGTAGGGTCCTTGGACATTCACTACGATATCTCTTTTTTGTCTGAAATATATTCTTGTTAAAAATATGATTTGGGTTTTCCTTCTTGTGTTACGTTGTCACTATTACTTCTAGAAAAAATGAACTCCACATGTCATGGATCCTTTTATCTTGTTCATTAAACAATAATGAATTGCAACGTCATGCAGATGTATATCTTGCTGGAACCGTCATGTTAATTTTTGGGATGGGCCTGTATGGATTGTTTATCAGTAATGTGTCCCCTGATGAACCTCCTCTTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGGATGTTTGCCTTGAAGGTAAACTAAAGACTTGCTATTTTTTATTGTTTACCTTCAAGAAAATCACTAGTGTGTCCTTCAAGCGTGCATTTACAGTACATTGCTTTCATTTAGATGAATGTTAAATCTTTACTGGATATTTAAGTTGATAGGTTCGGAAATATTTAGTCTTTCCTATATTCTGGATTTAGATAATTTGATTTAGAATTCTGACACATGAATTATTAATATCAATTAGGGAGGAAATAGAATCTTAAGAGTTGAACTCTGACCTTATGGTATGATATCATATTAAATAACTTAGACTCCTTACCAACAAAAATAATCTCATTTAGCCCCGAAGCTTAGATATAGTTGACTATGTTGAATAACCATTAGGCCCTGTACCAAGAAAGAACCTAAGTTTATTTACGGTATATTTGATCTTTTATATTTATTCAAGTCATCTGATGAAAACTGACAAATACTCATATGATAGGAACCAAAACACAATTGACTATGTTGAAATGTAAATGACGGAAAAACTTATAACATTGCCAAGTAACTAGAGAAACTTGAATCCTACCATCTTGAGATCCCTCTTAAACTCTAATTCACTCACCATAATATTTCTTTAACGACTCCCTTCCTCCCCTCTATATTTATTACCAAATATCAAAAGGTTTAAAACAACCTCAATAGCTAATTACTAAGATACCCTTAATGTTCTATTAAGACCCTATACGACTTCTATCATTATATTAGAATGGTTCTAAGCTAGAACTTGAATTCTGTTGAAGAAAATCTAAGATTCCAACAGAACTAGATTCTGTAAGCTTGATATGGTCTATGAAGGGAAATTATTGCTACTAGGTTATTCAGTGAGGATGGAAATCGTGGTGTTTGTATGGTTGTATTGTCTTGAAACTTTTGGAACAGAGAATGGACTATGAGCTTAGTTTTCGTGGTCAATGGTTCTCTTTTCCCTCTTGGACCCCATTTATAATTTTGGTGTTAATTGGTTGCAGGAGAGGCCAAAATGGATGAAAATTAGCTCCCTTGATGAGCTGAAAACAAAAGTTGGACATGTTATTGTGATGATTCTTTTAGTGAAAATGTTCGAGAGAAGCAAAATGGTAACAATAGCAACAGGTCTTGATCTACTCAGCTATTCTGTTTGCATTTTCTTGTCTTCGGCTTCTTTATACATCCTACATAATCTACACAGGCCAGAATAGGAATACAGAGCTTTGAAATTTATCAGATGAAGCCTCTATCTGTTTTGTTTATACTCTTTATGTTCTCTTATGTATGTCAGTGTAAGAGCCGAATGCATTATTTTCTGTCCTAAATCTCCTGGTATTACAAAAGATTGTAGCTTCCTGTAGGAATAGTTGTCCTGTGTATACTTGTTGTTTGGCTCTATTGTATATATACTTTCATCTGTATAAATATGATTGTTTGTACACGTATTATTTAATCATTTTAAGCGATC

mRNA sequence

GTTGATTTTGCAATTTGTAAGAGAAAAAAGTAAAAAAAAGGAAAAAAGAAAGATGATTTCGTTGGGACACTGTTTTTGGCGGTAAAATCAGTCATAGTCAGAGAGCTTAGACTCAAAGAGAGAATGAGACACAAAAATGTCCATTTCAAAGCTTCAAGATCTGAATGATGATGAAGATGAAGAACAAGAAGATCAATAAAAAATATCTTCTTTCCAAATAAATATCCTCTTCGTTCTCATTTCTCTTTTCTCCACACTCCAATTTCCCATTCCAATGGCGTTTTCTGCTTTCTCCCCTCTTCCATTCCCCGTCTCCTTAGGGTTCCGCCGCCCTCAATCTCCCACCACCGCCTTTCCTCGCCTTTCCTTCCCTGTTTCTGCTTCTTTGAGCTCTTCCTCTTCTGAATCTAAATCCGCTAAATCATCCTCCCCCACCGATAATCTTGTTTCCTCCTCAAATGGAACTACTCCCCCTTCCTTTGTTGAACCCTCCACACCTCCTGACTCTAATTTCCCTTACGCATTTCCTAACCCTACTCCTGCTGCGTCTGCTTCTCTTCACCCCATTCTTGGGTTTATGCAATCCACTGAATCTTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCCCTGCTTGCGGTTGGGGGTTCACTGGCGGGTTCATTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCTAGCTGTGTCAAAGGAATTCACACCGGACAAATGGTTTTGCGACTTGTTGAAGCTATCGATGTATATCTTGCTGGAACCGTCATGTTAATTTTTGGGATGGGCCTGTATGGATTGTTTATCAGTAATGTGTCCCCTGATGAACCTCCTCTTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGGATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCCCTTGATGAGCTGAAAACAAAAGTTGGACATGTTATTGTGATGATTCTTTTAGTGAAAATGTTCGAGAGAAGCAAAATGGTAACAATAGCAACAGGTCTTGATCTACTCAGCTATTCTGTTTGCATTTTCTTGTCTTCGGCTTCTTTATACATCCTACATAATCTACACAGGCCAGAATAGGAATACAGAGCTTTGAAATTTATCAGATGAAGCCTCTATCTGTTTTGTTTATACTCTTTATGTTCTCTTATGTATGTCAGTGTAAGAGCCGAATGCATTATTTTCTGTCCTAAATCTCCTGGTATTACAAAAGATTGTAGCTTCCTGTAGGAATAGTTGTCCTGTGTATACTTGTTGTTTGGCTCTATTGTATATATACTTTCATCTGTATAAATATGATTGTTTGTACACGTATTATTTAATCATTTTAAGCGATC

Coding sequence (CDS)

ATGGCGTTTTCTGCTTTCTCCCCTCTTCCATTCCCCGTCTCCTTAGGGTTCCGCCGCCCTCAATCTCCCACCACCGCCTTTCCTCGCCTTTCCTTCCCTGTTTCTGCTTCTTTGAGCTCTTCCTCTTCTGAATCTAAATCCGCTAAATCATCCTCCCCCACCGATAATCTTGTTTCCTCCTCAAATGGAACTACTCCCCCTTCCTTTGTTGAACCCTCCACACCTCCTGACTCTAATTTCCCTTACGCATTTCCTAACCCTACTCCTGCTGCGTCTGCTTCTCTTCACCCCATTCTTGGGTTTATGCAATCCACTGAATCTTCAATTGAGAGGGTTATTTTTGACTTCCGTTTCTTGGCCCTGCTTGCGGTTGGGGGTTCACTGGCGGGTTCATTCTTGTGCTTTCTCAATGGCTGCGTTTATATTTGTGATGCATATAAAGTTTACTGGTCTAGCTGTGTCAAAGGAATTCACACCGGACAAATGGTTTTGCGACTTGTTGAAGCTATCGATGTATATCTTGCTGGAACCGTCATGTTAATTTTTGGGATGGGCCTGTATGGATTGTTTATCAGTAATGTGTCCCCTGATGAACCTCCTCTTGTTGATCGTGCCCTGAAAGGGTCCTCACTGTTTGGGATGTTTGCCTTGAAGGAGAGGCCAAAATGGATGAAAATTAGCTCCCTTGATGAGCTGAAAACAAAAGTTGGACATGTTATTGTGATGATTCTTTTAGTGAAAATGTTCGAGAGAAGCAAAATGGTAACAATAGCAACAGGTCTTGATCTACTCAGCTATTCTGTTTGCATTTTCTTGTCTTCGGCTTCTTTATACATCCTACATAATCTACACAGGCCAGAATAG

Protein sequence

MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE*
Homology
[Close]
BLAST of MELO3C023994 vs. TrEMBL
Match: A0A0A0LCC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G687750 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 1.5e-151
Identity = 275/289 (95.16%), Postives = 280/289 (96.89%), Query Frame = 1 

Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60
           MAFSAFSPLPFP+SLGFRRPQSPTTAFPRL FP+S+SLSSSSSESKSAKSSSPTDNLVSS
Sbjct: 1   MAFSAFSPLPFPLSLGFRRPQSPTTAFPRLPFPISSSLSSSSSESKSAKSSSPTDNLVSS 60

Query: 61  SNGTTP--PSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRF 120
           SNGTTP  PSFV+PSTPP SNF YAFPNPTP ASASLHPILGFMQS ESSIERVIFDFRF
Sbjct: 61  SNGTTPPSPSFVDPSTPPHSNFTYAFPNPTPPASASLHPILGFMQSAESSIERVIFDFRF 120

Query: 121 LALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180
           LAL AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Sbjct: 121 LALFAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180

Query: 181 MLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240
           MLIFGMGLYGLFISNVSPDEPP VDRAL+GSSLFGMFALKERPKWMKISSLDELKTKVGH
Sbjct: 181 MLIFGMGLYGLFISNVSPDEPPSVDRALQGSSLFGMFALKERPKWMKISSLDELKTKVGH 240

Query: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289

[Close]
BLAST of MELO3C023994 vs. TrEMBL
Match: A0A067L571_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16864 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.9e-102
Identity = 208/285 (72.98%), Postives = 225/285 (78.95%), Query Frame = 1 

Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSN 62
           FS+    P  +S   R+P        RL FP++   SSS S  +SA +   T  L SS  
Sbjct: 4   FSSILTSPLSISTPIRQPIKIKR---RLLFPLATLSSSSPSSPESAAAPVTTRPLDSSKT 63

Query: 63  GTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALL 122
            +T  +FVE S   DS+F YA  NPT       +P + F++STES+IERVIFDFRFLALL
Sbjct: 64  PST--TFVESSRTHDSSFNYALANPT-----GNNPFVRFVRSTESNIERVIFDFRFLALL 123

Query: 123 AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 182
           A+GGSLAGS LCFLNGCVYI DAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF
Sbjct: 124 AIGGSLAGSLLCFLNGCVYIFDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 183

Query: 183 GMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 242
           GMGLYGLFISNV PD  P VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM
Sbjct: 184 GMGLYGLFISNVPPDVSPQVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 243

Query: 243 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           ILLVKMFERSKMVTIATG DLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 244 ILLVKMFERSKMVTIATGTDLLSYSVCIFLSSASLYILHNLHKSE 278

[Close]
BLAST of MELO3C023994 vs. TrEMBL
Match: A0A0B2SL53_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_039995 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-101
Identity = 199/265 (75.09%), Postives = 218/265 (82.26%), Query Frame = 1 

Query: 23  PTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSNGTTPPSFVEPSTPPDSNFPY 82
           P +  PR  F   ASLSSSS ESK+++S S      S+++ TT P+    S PPD  F Y
Sbjct: 14  PPSHIPRRLFCPKASLSSSSPESKASQSVS------SATSTTTSPTPSVESRPPDPAFNY 73

Query: 83  AFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYI 142
           A  NP        +PI+  +++TESSIERVIFDFRFLALLAVGGSLAGS LCFLNGC+YI
Sbjct: 74  ALTNPNG------NPIVRIVRATESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCIYI 133

Query: 143 CDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLV 202
            DAYKVYWSSCVKG+HTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNV PD PP V
Sbjct: 134 IDAYKVYWSSCVKGVHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDVPPTV 193

Query: 203 DRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLD 262
           DRALKGSSLFGMFA+KERPKWMKI SLDELKTKVGHVIVMILLVKMFERSKMVTI TGLD
Sbjct: 194 DRALKGSSLFGMFAMKERPKWMKICSLDELKTKVGHVIVMILLVKMFERSKMVTIVTGLD 253

Query: 263 LLSYSVCIFLSSASLYILHNLHRPE 288
           LL YS+CIFLSSASLYILHNLH+ +
Sbjct: 254 LLCYSICIFLSSASLYILHNLHKSD 266

[Close]
BLAST of MELO3C023994 vs. TrEMBL
Match: D7T379_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g00200 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-101
Identity = 207/287 (72.13%), Postives = 229/287 (79.79%), Query Frame = 1 

Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKS--SSPTDNLVSS 62
           F+A S  P  +SL   RP +    F     P  AS+SSSS ES       S PT+ ++SS
Sbjct: 4   FAAMSYTPLSLSLSRLRPPTNHRRFS----PCLASVSSSSHESSPPPPPPSPPTETILSS 63

Query: 63  SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 122
           +  + P   VE S P +S + YA P+P  +      PI+ F++ +ESSIERVIFDFRFLA
Sbjct: 64  NPPSKP--LVESSRPLNSTYNYALPDPKAS------PIVRFVRYSESSIERVIFDFRFLA 123

Query: 123 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 182
           LLAVGGSLAGS LCFLNGCVYI DAYKVYW+SCVKGIHTG+MVLRLVEAIDVYLAGTVML
Sbjct: 124 LLAVGGSLAGSLLCFLNGCVYIVDAYKVYWTSCVKGIHTGKMVLRLVEAIDVYLAGTVML 183

Query: 183 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 242
           IFGMGLYGLFISNV PD PP VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI
Sbjct: 184 IFGMGLYGLFISNVPPDVPPSVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 243

Query: 243 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VMILLVKMFERSKMVTIATG+DLLSYSVCIFLSSASLYIL+NLH+ E
Sbjct: 244 VMILLVKMFERSKMVTIATGMDLLSYSVCIFLSSASLYILNNLHKAE 278

[Close]
BLAST of MELO3C023994 vs. TrEMBL
Match: K7MEA1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G276700 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.1e-101
Identity = 199/265 (75.09%), Postives = 218/265 (82.26%), Query Frame = 1 

Query: 23  PTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSNGTTPPSFVEPSTPPDSNFPY 82
           P +  PR  F   ASLSSSS ESK+++S S      S+++ TT P+    S PPD  F Y
Sbjct: 14  PPSHIPRRLFCPKASLSSSSPESKASQSVS------SATSTTTSPTPSVESRPPDPAFNY 73

Query: 83  AFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYI 142
           A  NP        +PI+  +++TESSIERVIFDFRFLALLAVGGSLAGS LCFLNGC+YI
Sbjct: 74  ALTNPNG------NPIVRIVRATESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCIYI 133

Query: 143 CDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLV 202
            DAYKVYWSSCVKG+HTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNV PD PP V
Sbjct: 134 IDAYKVYWSSCVKGVHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDVPPTV 193

Query: 203 DRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLD 262
           DRALKGSSLFGMFA+KERPKWMKI SLDELKTKVGHVIVMILLVKMFERSKMVTI TGLD
Sbjct: 194 DRALKGSSLFGMFAMKERPKWMKICSLDELKTKVGHVIVMILLVKMFERSKMVTIVTGLD 253

Query: 263 LLSYSVCIFLSSASLYILHNLHRPE 288
           LL YS+CIFLSSASLYILHNLH+ +
Sbjct: 254 LLCYSICIFLSSASLYILHNLHKSD 266

[Close]
BLAST of MELO3C023994 vs. TAIR10
Match: AT5G13720.1 (AT5G13720.1 Uncharacterised protein family (UPF0114))

HSP 1 Score: 332.0 bits (850), Expect = 3.6e-91
Identity = 171/225 (76.00%), Postives = 185/225 (82.22%), Query Frame = 1 

Query: 73  STPPDSNFPYAFPNPTPAASASL----------HPILGFMQSTESSIERVIFDFRFLALL 132
           S+PP+S+   + P   P    +L           P   F +STES++ER+IFDFRFLALL
Sbjct: 37  SSPPESSASSSIPTSIPVNGNTLPSSYGTRKDDSPFAQFFRSTESNVERIIFDFRFLALL 96

Query: 133 AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 192
           AVGGSLAGS LCFLNGCVYI +AYKVYW++C KGIHTGQMVLRLVEAIDVYLAGTVMLIF
Sbjct: 97  AVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQMVLRLVEAIDVYLAGTVMLIF 156

Query: 193 GMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 252
            MGLYGLFIS+   D PP  DRAL+ SSLFGMFA+KERPKWMKISSLDELKTKVGHVIVM
Sbjct: 157 SMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPKWMKISSLDELKTKVGHVIVM 216

Query: 253 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 217 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHKGE 261

[Close]
BLAST of MELO3C023994 vs. TAIR10
Match: AT4G19390.1 (AT4G19390.1 Uncharacterised protein family (UPF0114))

HSP 1 Score: 185.3 bits (469), Expect = 5.4e-47
Identity = 104/240 (43.33%), Postives = 142/240 (59.17%), Query Frame = 1 

Query: 57  LVSSSNGTTPPSFVEPS-TPPDSNFPYAFPNPTPAASASLHPILGF-----------MQS 116
           ++SS  G   PS    + T  D ++ Y  P    +AS S                   ++
Sbjct: 37  VISSFRGLKLPSRTTKTITSSDWSWSYRSPGRLASASTSTSASTSTSAAVTSNSTNRFEA 96

Query: 117 TESSIERVIFDFRFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVL 176
            E  IE+VI+  RF+  L   GSL GS LCF+ GC+Y+ D++  Y       ++ G+++ 
Sbjct: 97  LEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------SVNRGKVIF 156

Query: 177 RLVEAIDVYLAGTVMLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWM 236
            LVEAID+YL GTVML+FG+GLY LFISN+   E    D     SSLFGMF LKERP+W+
Sbjct: 157 LLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERPQWL 216

Query: 237 KISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLH 285
           ++ S+ ELKTK+GHVIVM+LL+ +F++SK V I +  DLL  SV IF SSA L++L  L+
Sbjct: 217 EVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLSRLN 270

[Close]
BLAST of MELO3C023994 vs. NCBI nr
Match: gi|659123749|ref|XP_008461820.1| (PREDICTED: uncharacterized protein LOC103500330 [Cucumis melo])

HSP 1 Score: 569.3 bits (1466), Expect = 3.8e-159
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 1 

Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60
           MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS
Sbjct: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60

Query: 61  SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 120
           SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA
Sbjct: 61  SNGTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLA 120

Query: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180
           LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML
Sbjct: 121 LLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVML 180

Query: 181 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240
           IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI
Sbjct: 181 IFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVI 240

Query: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 287

[Close]
BLAST of MELO3C023994 vs. NCBI nr
Match: gi|778682741|ref|XP_011651765.1| (PREDICTED: uncharacterized protein LOC101217857 [Cucumis sativus])

HSP 1 Score: 543.5 bits (1399), Expect = 2.2e-151
Identity = 275/289 (95.16%), Postives = 280/289 (96.89%), Query Frame = 1 

Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSS 60
           MAFSAFSPLPFP+SLGFRRPQSPTTAFPRL FP+S+SLSSSSSESKSAKSSSPTDNLVSS
Sbjct: 1   MAFSAFSPLPFPLSLGFRRPQSPTTAFPRLPFPISSSLSSSSSESKSAKSSSPTDNLVSS 60

Query: 61  SNGTTP--PSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRF 120
           SNGTTP  PSFV+PSTPP SNF YAFPNPTP ASASLHPILGFMQS ESSIERVIFDFRF
Sbjct: 61  SNGTTPPSPSFVDPSTPPHSNFTYAFPNPTPPASASLHPILGFMQSAESSIERVIFDFRF 120

Query: 121 LALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180
           LAL AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV
Sbjct: 121 LALFAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTV 180

Query: 181 MLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGH 240
           MLIFGMGLYGLFISNVSPDEPP VDRAL+GSSLFGMFALKERPKWMKISSLDELKTKVGH
Sbjct: 181 MLIFGMGLYGLFISNVSPDEPPSVDRALQGSSLFGMFALKERPKWMKISSLDELKTKVGH 240

Query: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE
Sbjct: 241 VIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 289

[Close]
BLAST of MELO3C023994 vs. NCBI nr
Match: gi|1009129568|ref|XP_015881836.1| (PREDICTED: uncharacterized protein LOC107417715 [Ziziphus jujuba])

HSP 1 Score: 388.7 bits (997), Expect = 9.2e-105
Identity = 209/288 (72.57%), Postives = 234/288 (81.25%), Query Frame = 1 

Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSP--TDNLVSS 62
           F++ S  P  VS   RR  + +  F   + P  ASLSSSSS  +S   S+P  T+ +VSS
Sbjct: 4   FTSISTAPVKVSFPIRRRFNHSDRF--FTKPTIASLSSSSSSPESKSKSNPPRTETVVSS 63

Query: 63  SNGTTPPSFVE-PSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFL 122
           +  + P  FVE PS PP+S F YA  NP        +P++ F++STES+IER IFDFRFL
Sbjct: 64  ATSSNP--FVEKPSKPPESGFNYALSNPNG------NPVVRFVRSTESTIERTIFDFRFL 123

Query: 123 ALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 182
           ALLA+GGSLAGS LCFLNGCVYI +AYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM
Sbjct: 124 ALLAIGGSLAGSLLCFLNGCVYIVEAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVM 183

Query: 183 LIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHV 242
           LIFGMGLYGLFISNV PD PP VDRALKGSSLFGMFA+KERPKWMKISSLDELKTKVGHV
Sbjct: 184 LIFGMGLYGLFISNVPPDVPPSVDRALKGSSLFGMFAMKERPKWMKISSLDELKTKVGHV 243

Query: 243 IVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           IVMILLVKMFERSKMVTIA+GLDLLSYS+CIFLSSASLYILH+LH+ E
Sbjct: 244 IVMILLVKMFERSKMVTIASGLDLLSYSICIFLSSASLYILHHLHKSE 281

[Close]
BLAST of MELO3C023994 vs. NCBI nr
Match: gi|747044240|ref|XP_011088022.1| (PREDICTED: uncharacterized protein LOC105169335 [Sesamum indicum])

HSP 1 Score: 387.1 bits (993), Expect = 2.7e-104
Identity = 211/291 (72.51%), Postives = 234/291 (80.41%), Query Frame = 1 

Query: 1   MAFSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLS---SSSSESKSAKSSSPTDNL 60
           MA  + S    P+SL    P S   A  +LS P  ASLS   SSSS S+ + S++ T+N 
Sbjct: 1   MALISSSVSANPLSLCISTPHSSRKARRKLS-PSLASLSPSSSSSSASQESTSATKTENF 60

Query: 61  VSSSNGTTPPS-FVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDF 120
             S+ G++P + FVEP TPP+  + YA  NP        +P++ F+QSTES+IERVIFDF
Sbjct: 61  GVSTKGSSPRAPFVEPLTPPELPYNYALANPNG------NPVVQFVQSTESTIERVIFDF 120

Query: 121 RFLALLAVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAG 180
           RFLALLAVGGSLAGS LCFLNGCVYI DAYKVYW+SCVKGIHTG+MVLRLVEAIDVYLAG
Sbjct: 121 RFLALLAVGGSLAGSLLCFLNGCVYIFDAYKVYWTSCVKGIHTGKMVLRLVEAIDVYLAG 180

Query: 181 TVMLIFGMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKV 240
           TVMLIFGMGLYGLFISNVS D PP  DRAL GSSLFGMFALKERPKWMKISSLDELKTKV
Sbjct: 181 TVMLIFGMGLYGLFISNVSADVPPSTDRALTGSSLFGMFALKERPKWMKISSLDELKTKV 240

Query: 241 GHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           GHVIVMILLVKMFERSKMVTI TG DLLSYS+CIFLSSASLYILHNLH+PE
Sbjct: 241 GHVIVMILLVKMFERSKMVTITTGTDLLSYSICIFLSSASLYILHNLHKPE 284

[Close]
BLAST of MELO3C023994 vs. NCBI nr
Match: gi|802555766|ref|XP_012065612.1| (PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas])

HSP 1 Score: 379.4 bits (973), Expect = 5.6e-102
Identity = 208/285 (72.98%), Postives = 225/285 (78.95%), Query Frame = 1 

Query: 3   FSAFSPLPFPVSLGFRRPQSPTTAFPRLSFPVSASLSSSSSESKSAKSSSPTDNLVSSSN 62
           FS+    P  +S   R+P        RL FP++   SSS S  +SA +   T  L SS  
Sbjct: 4   FSSILTSPLSISTPIRQPIKIKR---RLLFPLATLSSSSPSSPESAAAPVTTRPLDSSKT 63

Query: 63  GTTPPSFVEPSTPPDSNFPYAFPNPTPAASASLHPILGFMQSTESSIERVIFDFRFLALL 122
            +T  +FVE S   DS+F YA  NPT       +P + F++STES+IERVIFDFRFLALL
Sbjct: 64  PST--TFVESSRTHDSSFNYALANPT-----GNNPFVRFVRSTESNIERVIFDFRFLALL 123

Query: 123 AVGGSLAGSFLCFLNGCVYICDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 182
           A+GGSLAGS LCFLNGCVYI DAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF
Sbjct: 124 AIGGSLAGSLLCFLNGCVYIFDAYKVYWSSCVKGIHTGQMVLRLVEAIDVYLAGTVMLIF 183

Query: 183 GMGLYGLFISNVSPDEPPLVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 242
           GMGLYGLFISNV PD  P VDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM
Sbjct: 184 GMGLYGLFISNVPPDVSPQVDRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVM 243

Query: 243 ILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHNLHRPE 288
           ILLVKMFERSKMVTIATG DLLSYSVCIFLSSASLYILHNLH+ E
Sbjct: 244 ILLVKMFERSKMVTIATGTDLLSYSVCIFLSSASLYILHNLHKSE 278

The following BLAST results are available for this feature:
BLAST of MELO3C023994 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCC7_CUCSA1.5e-15195.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G687750 PE=4 SV=1[more]
A0A067L571_JATCU3.9e-10272.98Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16864 PE=4 SV=1[more]
A0A0B2SL53_GLYSO1.1e-10175.09Uncharacterized protein OS=Glycine soja GN=glysoja_039995 PE=4 SV=1[more]
D7T379_VITVI1.1e-10172.13Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0064g00200 PE=4 SV=... [more]
K7MEA1_SOYBN1.1e-10175.09Uncharacterized protein OS=Glycine max GN=GLYMA_15G276700 PE=4 SV=1[more]
BLAST of MELO3C023994 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G13720.13.6e-9176.00 Uncharacterised protein family (UPF0114)[more]
AT4G19390.15.4e-4743.33 Uncharacterised protein family (UPF0114)[more]
BLAST of MELO3C023994 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659123749|ref|XP_008461820.1|3.8e-159100.00PREDICTED: uncharacterized protein LOC103500330 [Cucumis melo][more]
gi|778682741|ref|XP_011651765.1|2.2e-15195.16PREDICTED: uncharacterized protein LOC101217857 [Cucumis sativus][more]
gi|1009129568|ref|XP_015881836.1|9.2e-10572.57PREDICTED: uncharacterized protein LOC107417715 [Ziziphus jujuba][more]
gi|747044240|ref|XP_011088022.1|2.7e-10472.51PREDICTED: uncharacterized protein LOC105169335 [Sesamum indicum][more]
gi|802555766|ref|XP_012065612.1|5.6e-10272.98PREDICTED: uncharacterized protein LOC105628744 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005134UPF0114
IPR016804UPF0114_pln
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0010501 RNA secondary structure unwinding
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005524 ATP binding
molecular_function GO:0004004 ATP-dependent RNA helicase activity
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU54438melon EST collection version 4.0transcribed_cluster
MU54999melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C023994T1MELO3C023994T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54438MU54438transcribed_cluster
MU54999MU54999transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005134Uncharacterised protein family UPF0114PFAMPF03350UPF0114coord: 113..251
score: 1.2
IPR016804Uncharacterised protein family UPF0114, plantPIRPIRSF022348UCP022348coord: 10..287
score: 5.2E
NoneNo IPR availablePANTHERPTHR31721FAMILY NOT NAMEDcoord: 41..287
score: 1.3E
NoneNo IPR availablePANTHERPTHR31721:SF1SUBFAMILY NOT NAMEDcoord: 41..287
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C023994Csa3G687750Cucumber (Chinese Long) v2cumeB207
MELO3C023994Cla017284Watermelon (97103) v1mewmB346
MELO3C023994ClCG10G012200Watermelon (Charleston Gray)mewcgB315
MELO3C023994Cla97C10G195020Watermelon (97103) v2mewmbB316
MELO3C023994Bhi11G001163Wax gourdmewgoB374
MELO3C023994CSPI03G29530Wild cucumber (PI 183967)cpimeB199
MELO3C023994Cucsa.248930Cucumber (Gy14) v1cgymeB420
MELO3C023994CmaCh14G009870Cucurbita maxima (Rimu)cmameB226
MELO3C023994CmaCh01G002380Cucurbita maxima (Rimu)cmameB426
MELO3C023994CmoCh01G002470Cucurbita moschata (Rifu)cmomeB416
MELO3C023994CmoCh14G010100Cucurbita moschata (Rifu)cmomeB210
MELO3C023994Lsi03G011950Bottle gourd (USVL1VR-Ls)lsimeB260
MELO3C023994Cp4.1LG02g15590Cucurbita pepo (Zucchini)cpemeB517
MELO3C023994Cp4.1LG03g04630Cucurbita pepo (Zucchini)cpemeB566
MELO3C023994CsGy3G027370Cucumber (Gy14) v2cgybmeB172
MELO3C023994Carg11210Silver-seed gourdcarmeB0811
MELO3C023994Carg07333Silver-seed gourdcarmeB0755
MELO3C023994CsaV3_3G031980Cucumber (Chinese Long) v3cucmeB205
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C023994Silver-seed gourdcarmeB0457
MELO3C023994Cucumber (Chinese Long) v3cucmeB570
MELO3C023994Melon (DHL92) v3.5.1memeB083
MELO3C023994Cucumber (Gy14) v1cgymeB206
MELO3C023994Cucurbita maxima (Rimu)cmameB333
MELO3C023994Cucurbita maxima (Rimu)cmameB842
MELO3C023994Cucurbita moschata (Rifu)cmomeB326
MELO3C023994Cucurbita moschata (Rifu)cmomeB824
MELO3C023994Wild cucumber (PI 183967)cpimeB559
MELO3C023994Cucumber (Chinese Long) v2cumeB551
MELO3C023994Watermelon (Charleston Gray)mewcgB313
MELO3C023994Cucurbita pepo (Zucchini)cpemeB133
MELO3C023994Cucurbita pepo (Zucchini)cpemeB308
MELO3C023994Bottle gourd (USVL1VR-Ls)lsimeB212
MELO3C023994Cucumber (Gy14) v2cgybmeB488