Carg13324 (gene) Silver-seed gourd

Overview
NameCarg13324
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionE3 ubiquitin-protein ligase RING1-like
LocationCucurbita_argyrosperma_scaffold_038 : 970281 .. 971159 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAGTGGGCAGAACACCCATTGGTGTTATAGATGCAGAAGGTCGATACGTCTTTGTGGTCGAGATGCAGTTTGCTCCAACTGTAATGGAGGATTCATTCAAGAACTCGACGACATGGTGCCTGGAAACCCGTTTGATTTCTTTGGTCTGGATCATGACGAAGACCGTGATCATGGGCTGGGAGCGTTCTCTGCTTTTATGAGACAACGGTTAGCCGAACGAAACGACATGAGGGGAAGATCAGAGTCACTTTTCGAGCGTAACCCAGGATTTGGCCCTCTATTAATATTTGGTGGTCAAATTCCTTTGAGAAACCGTAGGCTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGAATTACACGGGGTGATGGTGGTGACTACTTCATAGGCCCTGGACTGGAGGAGCTGTTCGAACAGCTTTCGGAAAATGGTCATCGTGGTCCTCCACCGGCATCTAGATCATTGATTGACGCTATGCCAACGGTTAAGATCACGCAGCGACATCTTCGCTCAGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGATCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATAGTTCCATGGCTGGTTCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATGGGGGCCGCGGGCCATAACACCAACAGTCAAAACCGAAACAACAGCTACAACAACAATGGCAATGGCTCCTCCAGGGTTAATCCAGGAAGGCGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCGAATTCTAGCTCCAACCATGGCGGAGCAGGGAGCAGTGAATCGAGGAACCACCAGATGGGGTATTCGGGATAA

mRNA sequence

ATGTCGAGTGGGCAGAACACCCATTGGTGTTATAGATGCAGAAGGTCGATACGTCTTTGTGGTCGAGATGCAGTTTGCTCCAACTGTAATGGAGGATTCATTCAAGAACTCGACGACATGGTGCCTGGAAACCCGTTTGATTTCTTTGGTCTGGATCATGACGAAGACCGTGATCATGGGCTGGGAGCGTTCTCTGCTTTTATGAGACAACGGTTAGCCGAACGAAACGACATGAGGGGAAGATCAGAGTCACTTTTCGAGCGTAACCCAGGATTTGGCCCTCTATTAATATTTGGTGGTCAAATTCCTTTGAGAAACCGTAGGCTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGAATTACACGGGGTGATGGTGGTGACTACTTCATAGGCCCTGGACTGGAGGAGCTGTTCGAACAGCTTTCGGAAAATGGTCATCGTGGTCCTCCACCGGCATCTAGATCATTGATTGACGCTATGCCAACGGTTAAGATCACGCAGCGACATCTTCGCTCAGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGATCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATAGTTCCATGGCTGGTTCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATGGGGGCCGCGGGCCATAACACCAACAGTCAAAACCGAAACAACAGCTACAACAACAATGGCAATGGCTCCTCCAGGGTTAATCCAGGAAGGCGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCGAATTCTAGCTCCAACCATGGCGGAGCAGGGAGCAGTGAATCGAGGAACCACCAGATGGGGTATTCGGGATAA

Coding sequence (CDS)

ATGTCGAGTGGGCAGAACACCCATTGGTGTTATAGATGCAGAAGGTCGATACGTCTTTGTGGTCGAGATGCAGTTTGCTCCAACTGTAATGGAGGATTCATTCAAGAACTCGACGACATGGTGCCTGGAAACCCGTTTGATTTCTTTGGTCTGGATCATGACGAAGACCGTGATCATGGGCTGGGAGCGTTCTCTGCTTTTATGAGACAACGGTTAGCCGAACGAAACGACATGAGGGGAAGATCAGAGTCACTTTTCGAGCGTAACCCAGGATTTGGCCCTCTATTAATATTTGGTGGTCAAATTCCTTTGAGAAACCGTAGGCTAGAAGCTCTCTTCAATGGGGCTCCTGGCATTGGAATTACACGGGGTGATGGTGGTGACTACTTCATAGGCCCTGGACTGGAGGAGCTGTTCGAACAGCTTTCGGAAAATGGTCATCGTGGTCCTCCACCGGCATCTAGATCATTGATTGACGCTATGCCAACGGTTAAGATCACGCAGCGACATCTTCGCTCAGATTCACATTGTCCAGTTTGCAAAGAAAAATTTGAACTGGGATCTGAAGCAAGGCAGATGGCCTGTAATCACATGTACCACTCAGATTGTATAGTTCCATGGCTGGTTCAGCACAACTCTTGCCCTGTCTGCCGCCAGGAACTGCCACCACAGGTAATGGGGGCCGCGGGCCATAACACCAACAGTCAAAACCGAAACAACAGCTACAACAACAATGGCAATGGCTCCTCCAGGGTTAATCCAGGAAGGCGGAATCCATTCTCTTATCTGTGGCCATTTCGGTCATCGAATTCTAGCTCCAACCATGGCGGAGCAGGGAGCAGTGAATCGAGGAACCACCAGATGGGGTATTCGGGATAA

Protein sequence

MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHGLGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIGITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSQNRNNSYNNNGNGSSRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG
Homology
[Close]
BLAST of Carg13324 vs. NCBI nr
Match: XP_022924954.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022924955.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata])

HSP 1 Score: 575.1 bits (1481), Expect = 1.4e-160
Identity = 287/292 (98.29%), Postives = 288/292 (98.63%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVC NCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGR+ESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRAESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXX 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG AGHNT  XXXXX
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGAGHNTXXXXXXX 240

Query: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 293
           XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG
Sbjct: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 292

[Close]
BLAST of Carg13324 vs. NCBI nr
Match: XP_023517925.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_023517926.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 560.5 bits (1443), Expect = 3.5e-156
Identity = 282/292 (96.58%), Postives = 282/292 (96.58%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVC NCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXX 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG        XXXXX
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 293
           XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNH MGYSG
Sbjct: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHPMGYSG 292

[Close]
BLAST of Carg13324 vs. NCBI nr
Match: XP_022966412.1 (probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022966413.1 probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima])

HSP 1 Score: 559.7 bits (1441), Expect = 5.9e-156
Identity = 281/292 (96.23%), Postives = 282/292 (96.58%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSGQNTHWCYRCRRSIRLCGRDAVC NCNGGFIQELDDMVPGNPFDFFGLD DEDRDHG
Sbjct: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDPDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEA FNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEAFFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDY IGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYVIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXX 240
           KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMG  GHN   XXXXX
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGGEGHNXXXXXXXX 240

Query: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 293
           XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESR+HQMGYSG
Sbjct: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRDHQMGYSG 292

[Close]
BLAST of Carg13324 vs. NCBI nr
Match: XP_004144313.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_004144314.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011653844.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_011653845.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >KGN54669.1 hypothetical protein Csa_4G419610 [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 1.0e-147
Identity = 265/292 (90.75%), Postives = 273/292 (93.49%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RL GRDAVC NCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFEQLSENGHRGPPPASRS IDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXX 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELPPQ +G        XXXXX
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQGIGXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 293
           XXXXXXXX  RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NHQMGYSG
Sbjct: 241 XXXXXXXXGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292

[Close]
BLAST of Carg13324 vs. NCBI nr
Match: XP_008455755.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455756.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455757.1 PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 512.3 bits (1318), Expect = 1.1e-141
Identity = 258/292 (88.36%), Postives = 266/292 (91.10%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RLCGRDAVC NCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFE+LS NGHRGPPPASRS IDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXX 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELP Q +         XXXXX
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 293
           XXXXXXXXXX VNPGRRNPFSYLWPFRSS+     GGAGSSE  NHQMGYSG
Sbjct: 241 XXXXXXXXXXXVNPGRRNPFSYLWPFRSSSXXXXXGGAGSSEPSNHQMGYSG 292

[Close]
BLAST of Carg13324 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 295.8 bits (756), Expect = 2.9e-80
Identity = 151/236 (63.98%), Postives = 180/236 (76.27%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MSS +NTHWC+RC+R++RL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRSESLFERN-PGFGPLLIFGGQIPLR---NRRL 120
               + AFS FMR RLAER+   ++RGR+ S    N PG  PLLIFGGQ+P R   +  +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVKIT 180
           EALFN G+PGIGITRG+ GDYF GPGLEELFEQLS     RGPPPA RS IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 QRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELP 223
           QRHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWLVQHNSCPVCRQELP
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 235

[Close]
BLAST of Carg13324 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 277.3 bits (708), Expect = 1.1e-74
Identity = 165/284 (58.10%), Postives = 195/284 (68.66%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSS +NTHWC+RC+R++ L  RDAVCS C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESL-FERNPGFGPLLIFGGQIPLR-----NRR 120
              + AFSAFMR RLAER+   ++ GR  S   E      PLLIFGGQ P R     N  
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVK 180
           +EA  NG APGIGI RG + GDYF GPGLEEL EQLS    HRGPPPA +S IDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITQRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQ 240
           ITQ+HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWLVQHNSCPVCR+ELP +
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 VMGAAGHNTNSXXXXXXXXXXXXXXXRVNPGRRNPFSYLWPFRS 269
               +  +T S       XXXXXXX R N  RRN FS LWPFRS
Sbjct: 241 ---GSSSSTQS-------XXXXXXXGRENSRRRNIFSNLWPFRS 267

[Close]
BLAST of Carg13324 vs. TAIR10
Match: AT3G10815.1 (RING/U-box superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 1.7e-40
Identity = 96/277 (34.66%), Postives = 132/277 (47.65%), Query Frame = 0 

Query: 5   QNTHWCYRCRRSIRLCG---RDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHGL 64
           +NTHWC+ CRR I L G   R+  C  C   F++ L + V  +PFD FGL ++E R+   
Sbjct: 7   KNTHWCHTCRRGIHLQGEGRREGACIYCGNTFLERLYENVELSPFDLFGLAYEEARN--- 66

Query: 65  GAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIGI 124
                        RN+ R                 + G Q+       E LFN  P +  
Sbjct: 67  ------------RRNNRRS----------------VIGEQL-----SFEELFNRLPAL-- 126

Query: 125 TRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVCK 184
                                     RGPPPAS + I+++  +KI Q+HL  D +CPVC+
Sbjct: 127 -----------------------QDRRGPPPASLAAINSLQKIKIRQKHLGLDPYCPVCQ 186

Query: 185 EKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXXX 244
           ++FE+GS+AR+M C H+YHS+CI+PWLVQ N+CPVCR+ELP                   
Sbjct: 187 DQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKELPQD----------------- 195

Query: 245 XXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGA 279
                      N  R+NP  +LWPFRSS  +SNH G+
Sbjct: 247 ----------RNNSRKNPLWHLWPFRSSGLASNHNGS 195

[Close]
BLAST of Carg13324 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 85/245 (34.69%), Postives = 121/245 (49.39%), Query Frame = 0 

Query: 9   WCYRCRRSIRL---CGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDE---------- 68
           +CY+C +++ +      D  C  CN GF++E +D  P    +F     D           
Sbjct: 22  FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFST 81

Query: 69  ----------DRDHGLGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQI-PL 128
                         G+   S F           + RS     ++  F P       +  L
Sbjct: 82  LLPLIFGSSAAAPSGMDFMSLF-----GPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 141

Query: 129 RN--RRLEALFNGAPGIGITR--GDGGDYFIGPGLEELFEQLSEN--GHRGPPPASRSLI 188
           R+     E +    P     R  G+ GDYF GPGLE+L +QL+EN     G PPAS+S I
Sbjct: 142 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 201

Query: 189 DAMPTVKITQRHLRSD-SHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVC 223
           DA+PTVK+T+  L+S+ + C VC ++FE GS+ +QM C H++H DC++PWL  HNSCPVC
Sbjct: 202 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 261

[Close]
BLAST of Carg13324 vs. TAIR10
Match: AT1G60360.1 (RING/U-box superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 2.6e-28
Identity = 79/246 (32.11%), Postives = 114/246 (46.34%), Query Frame = 0 

Query: 8   HWCYRCRRSIRLCG---RDAVCSNCNGGFIQELDD-MVPGNPFDFFGLDHDEDRDHGL-- 67
           +WCY C R +R+      +  C  C   F+ E++    P   F+      D   +  L  
Sbjct: 24  YWCYHCDRMVRIASSNPSEIACPRCLRQFVVEIETRQRPRFTFNHATPPFDASPEARLLE 83

Query: 68  -----------GAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLE 127
                      G F A    R   RN +   S    +         +  G +PL  R   
Sbjct: 84  ALSLMFEPATIGRFGADPFLRARSRNILEPESRPRPQHRRRHSLDNVNNGGLPLPRRTYV 143

Query: 128 ALFNGAPGIGI------------TRGDGGDYFIG-PGLEELFEQLSENGHRGPPPASRSL 187
            L    P   +               +  DYF G   LE+L EQL+++   GPPPAS   
Sbjct: 144 ILRPNNPTSPLGNIIAPPNQAPPRHVNSHDYFTGASSLEQLIEQLTQDDRPGPPPASEPT 203

Query: 188 IDAMPTVKITQRHLRSD-SHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPV 223
           I+++P+VKIT +HL +D S C VC E+F +G +A ++ C H+YH DCIVPWL  +NSCP+
Sbjct: 204 INSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLNNSCPI 263

[Close]
BLAST of Carg13324 vs. Swiss-Prot
Match: sp|O22197|RHC1A_ARATH (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 5.2e-79
Identity = 151/236 (63.98%), Postives = 180/236 (76.27%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFF----GLDHDED 60
           MSS +NTHWC+RC+R++RL G++ VC  C GGF++EL DM   +PFD F    G+   + 
Sbjct: 1   MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEEL-DMAQASPFDMFRSHRGVVERDQ 60

Query: 61  RDHGLGAFSAFMRQRLAERN---DMRGRSESLFERN-PGFGPLLIFGGQIPLR---NRRL 120
               + AFS FMR RLAER+   ++RGR+ S    N PG  PLLIFGGQ+P R   +  +
Sbjct: 61  TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 120

Query: 121 EALFN-GAPGIGITRGDGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVKIT 180
           EALFN G+PGIGITRG+ GDYF GPGLEELFEQLS     RGPPPA RS IDA+PT+KI 
Sbjct: 121 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 180

Query: 181 QRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELP 223
           QRHLR SDS+CPVCK++FELGSEA+QM CNH+YHSDCIVPWLVQHNSCPVCRQELP
Sbjct: 181 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELP 235

[Close]
BLAST of Carg13324 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.9e-73
Identity = 165/284 (58.10%), Postives = 195/284 (68.66%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSS +NTHWC+RC+R++ L  RDAVCS C GGF++E+ D+ P           D +RD  
Sbjct: 1   MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEI-DIGPSR------AHRDVERDPT 60

Query: 61  ---LGAFSAFMRQRLAERN---DMRGRSESL-FERNPGFGPLLIFGGQIPLR-----NRR 120
              + AFSAFMR RLAER+   ++ GR  S   E      PLLIFGGQ P R     N  
Sbjct: 61  FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 120

Query: 121 LEALFNG-APGIGITRG-DGGDYFIGPGLEELFEQLSE-NGHRGPPPASRSLIDAMPTVK 180
           +EA  NG APGIGI RG + GDYF GPGLEEL EQLS    HRGPPPA +S IDA+PT+K
Sbjct: 121 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 180

Query: 181 ITQRHLR-SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQ 240
           ITQ+HL+ SDSHCPVCK++FEL SEA+QM C+H+YHSDCIVPWLVQHNSCPVCR+ELP +
Sbjct: 181 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 240

Query: 241 VMGAAGHNTNSXXXXXXXXXXXXXXXRVNPGRRNPFSYLWPFRS 269
               +  +T S       XXXXXXX R N  RRN FS LWPFRS
Sbjct: 241 ---GSSSSTQS-------XXXXXXXGRENSRRRNIFSNLWPFRS 267

[Close]
BLAST of Carg13324 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.2e-32
Identity = 85/245 (34.69%), Postives = 121/245 (49.39%), Query Frame = 0 

Query: 9   WCYRCRRSIRL---CGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDE---------- 68
           +CY+C +++ +      D  C  CN GF++E +D  P    +F     D           
Sbjct: 22  FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFST 81

Query: 69  ----------DRDHGLGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQI-PL 128
                         G+   S F           + RS     ++  F P       +  L
Sbjct: 82  LLPLIFGSSAAAPSGMDFMSLF-----GPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTL 141

Query: 129 RN--RRLEALFNGAPGIGITR--GDGGDYFIGPGLEELFEQLSEN--GHRGPPPASRSLI 188
           R+     E +    P     R  G+ GDYF GPGLE+L +QL+EN     G PPAS+S I
Sbjct: 142 RSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAI 201

Query: 189 DAMPTVKITQRHLRSD-SHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVC 223
           DA+PTVK+T+  L+S+ + C VC ++FE GS+ +QM C H++H DC++PWL  HNSCPVC
Sbjct: 202 DALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVC 261

[Close]
BLAST of Carg13324 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.8e-30
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 0 

Query: 127 GDYFIGPGLEELFEQLSEN--GHRGPPPASRSLIDAMPTVKITQRHLRSD-SHCPVCKEK 186
           GDYFIGPGLE+L +QL+EN     G PPAS+S I+A+P V IT+ +L S+ + C VC + 
Sbjct: 171 GDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDD 230

Query: 187 FELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELP 223
           FE G+EA+QM C H+YH DC++PWL  HNSCPVCR ELP
Sbjct: 231 FEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELP 269

[Close]
BLAST of Carg13324 vs. Swiss-Prot
Match: sp|Q6AVN2|SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-26
Identity = 83/243 (34.16%), Postives = 122/243 (50.21%), Query Frame = 0 

Query: 8   HWCYRCRRSIRLCGRDAV-CSNCNGGFIQELDD----------MVPG----NPFDFFGLD 67
           +WC+ C ++I     D + C +C GGF++E+ D            PG    NP +  G  
Sbjct: 9   YWCHECEQAIEEAMVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEPGFSQWNPIEHPGET 68

Query: 68  HD-EDRDHGLG-AFSAFMRQ-RLAE--RNDMRGRSESLFERNPGFGPLLI--FGGQIPLR 127
            D +D D+ LG  F  F+R+ R A   R  +    + L +       +LI  F   + L+
Sbjct: 69  MDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSILINAFNQALALQ 128

Query: 128 NRRLEALFNGAPGIGITRGDG--GDYFIGPGLEELFEQLSEN--GHRGPPPASRSLIDAM 187
              L+         G T  DG   +Y +G GL  L + L+E+     G PPA +  ++A+
Sbjct: 129 GSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEAL 188

Query: 188 PTVKITQRHLRSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQEL 225
           PTVKI +        C VC +  E+GS+A+QM C H +HS CI+PWL  H+SCPVCR EL
Sbjct: 189 PTVKIEE-----VVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFEL 246

[Close]
BLAST of Carg13324 vs. TrEMBL
Match: tr|A0A0A0L0T9|A0A0A0L0T9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 6.7e-148
Identity = 265/292 (90.75%), Postives = 273/292 (93.49%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RL GRDAVC NCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLRGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFEQLSENGHRGPPPASRS IDAMPTVKITQRHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFEQLSENGHRGPPPASRSSIDAMPTVKITQRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXX 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELPPQ +G        XXXXX
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPPQGIGXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 293
           XXXXXXXX  RVNPGRRNPFSYLWPFRSS+S+SNHGGAGSSE  NHQMGYSG
Sbjct: 241 XXXXXXXXGSRVNPGRRNPFSYLWPFRSSSSNSNHGGAGSSEPSNHQMGYSG 292

[Close]
BLAST of Carg13324 vs. TrEMBL
Match: tr|A0A1S3C178|A0A1S3C178_CUCME (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103495857 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 7.2e-142
Identity = 258/292 (88.36%), Postives = 266/292 (91.10%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MS+G+NTHWCYRCRRS+RLCGRDAVC NCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG
Sbjct: 1   MSAGRNTHWCYRCRRSVRLCGRDAVCPNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60

Query: 61  LGAFSAFMRQRLAERNDMRGRSESLFERNPGFGPLLIFGGQIPLRNRRLEALFNGAPGIG 120
           LGAFSAFMRQRLAERNDMRGRSESLFE +PGFGPLLIFGGQIPLRN RLEALFNGAPGIG
Sbjct: 61  LGAFSAFMRQRLAERNDMRGRSESLFEHSPGFGPLLIFGGQIPLRNSRLEALFNGAPGIG 120

Query: 121 ITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLRSDSHCPVC 180
           ITRGD GDYFIGPGLEELFE+LS NGHRGPPPASRS IDAMPTVKIT RHLRSDSHCPVC
Sbjct: 121 ITRGDSGDYFIGPGLEELFERLSANGHRGPPPASRSSIDAMPTVKITHRHLRSDSHCPVC 180

Query: 181 KEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHNTNSXXXXX 240
           KEKFELGSEARQMACNHMYHSDCIVPWL+QHNSCPVCRQELP Q +         XXXXX
Sbjct: 181 KEKFELGSEARQMACNHMYHSDCIVPWLIQHNSCPVCRQELPSQGIXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSESRNHQMGYSG 293
           XXXXXXXXXX VNPGRRNPFSYLWPFRSS+     GGAGSSE  NHQMGYSG
Sbjct: 241 XXXXXXXXXXXVNPGRRNPFSYLWPFRSSSXXXXXGGAGSSEPSNHQMGYSG 292

[Close]
BLAST of Carg13324 vs. TrEMBL
Match: tr|A0A2N9I8M8|A0A2N9I8M8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38476 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.3e-111
Identity = 221/307 (71.99%), Postives = 242/307 (78.83%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSG+NTHWCY C R +RL GRDA C +CNGGF+QELDDM+  +PFD FGLD DEDRD  
Sbjct: 1   MSSGRNTHWCYNCSRPVRLRGRDAACPSCNGGFVQELDDMMRASPFDLFGLDIDEDRDRR 60

Query: 61  ---LGAFSAFMRQRLAER---NDMRGRSESLFERNPGFGPLLIFGGQIPLR---NRRLEA 120
              + AFSAFM QRLA+R   +D+R RS+++ E  PGFGPLLIFGGQIP+R   N   EA
Sbjct: 61  SRVMEAFSAFMGQRLADRSRSHDIRARSDAVPEHTPGFGPLLIFGGQIPIRLSGNGGFEA 120

Query: 121 LFNGAPGIGITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHL 180
           LFNG PGIG+TRG+ GDYFIGPGLEELFEQLS N  RGPPPA+RS IDAMPT+KITQRHL
Sbjct: 121 LFNGTPGIGLTRGNAGDYFIGPGLEELFEQLSANDRRGPPPAARSSIDAMPTIKITQRHL 180

Query: 181 RSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQ-VMGAAG 240
           RSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQ +     
Sbjct: 181 RSDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQGLSNGRS 240

Query: 241 HNTNSXXXXXXXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNH-GGAGSS----ESRN 293
                XXXXXXXXXXX    R + GRRNPFS  WPFRSS SSSNH G AGSS      +N
Sbjct: 241 SXXXXXXXXXXXXXXXRENSRESQGRRNPFSNFWPFRSSTSSSNHNGNAGSSSQTIHEQN 300

[Close]
BLAST of Carg13324 vs. TrEMBL
Match: tr|V4SSL7|V4SSL7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012279mg PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.6e-109
Identity = 205/305 (67.21%), Postives = 229/305 (75.08%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSG+NTHWCYRCRR +RL G DAVC  C+GGF+QELDDMV  +P DFFGLD+DE+RD  
Sbjct: 1   MSSGRNTHWCYRCRRPVRLQGEDAVCLYCSGGFVQELDDMVSVSPLDFFGLDNDEERDQR 60

Query: 61  LG---AFSAFMRQRLAER--NDMRGRSESLFERNPGFGPLLIFGGQIPLR---NRRLEAL 120
           LG   AFSAFMR R+A+R  +D+RGR +S  E   GFGPLLIFGGQIPLR   N   EA+
Sbjct: 61  LGLMEAFSAFMRHRMADRHSHDIRGRYDSTPEHGQGFGPLLIFGGQIPLRLSGNSGFEAI 120

Query: 121 FNGAPGIGITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLR 180
           F GAPG+G  RG+ GDYFIGPGLEELFEQLS NG RGPPPA+RS IDAMPTV+ITQRHLR
Sbjct: 121 FGGAPGLGFARGNTGDYFIGPGLEELFEQLSANGRRGPPPAARSAIDAMPTVRITQRHLR 180

Query: 181 SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHN 240
           SDSHCPVC++KFELGSEARQM CNH+YHSDCIVPWLVQHNSCPVCRQELP Q   ++  +
Sbjct: 181 SDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIH 240

Query: 241 TNSXXXXXXXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSES-----RNHQ 293
            +S               R N GRRN FS  WPFRSSNSSSNH G   S S      N  
Sbjct: 241 QSSSGQSRSTSFGSNGSGRENQGRRNLFSGFWPFRSSNSSSNHNGTTESSSPAMHENNPH 300

[Close]
BLAST of Carg13324 vs. TrEMBL
Match: tr|A0A067EQC1|A0A067EQC1_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021656mg PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 4.7e-109
Identity = 204/305 (66.89%), Postives = 229/305 (75.08%), Query Frame = 0 

Query: 1   MSSGQNTHWCYRCRRSIRLCGRDAVCSNCNGGFIQELDDMVPGNPFDFFGLDHDEDRDHG 60
           MSSG+NTHWCYRCRR +RL G DAVC  C+GGF+QELDDMV  +P DFFGLD+DE+RD  
Sbjct: 1   MSSGRNTHWCYRCRRPVRLQGEDAVCLYCSGGFVQELDDMVSVSPLDFFGLDNDEERDQR 60

Query: 61  LG---AFSAFMRQRLAER--NDMRGRSESLFERNPGFGPLLIFGGQIPLR---NRRLEAL 120
           LG   AFSAF+R R+A+R  +D+RGR +S  E   GFGPLLIFGGQIPLR   N   EA+
Sbjct: 61  LGLMEAFSAFVRHRMADRHSHDIRGRYDSTPEHGQGFGPLLIFGGQIPLRLSGNSGFEAI 120

Query: 121 FNGAPGIGITRGDGGDYFIGPGLEELFEQLSENGHRGPPPASRSLIDAMPTVKITQRHLR 180
           F GAPG+G  RG+ GDYFIGPGLEELFEQLS NG RGPPPA+RS IDAMPTV+ITQRHLR
Sbjct: 121 FGGAPGLGFARGNTGDYFIGPGLEELFEQLSANGRRGPPPAARSAIDAMPTVRITQRHLR 180

Query: 181 SDSHCPVCKEKFELGSEARQMACNHMYHSDCIVPWLVQHNSCPVCRQELPPQVMGAAGHN 240
           SDSHCPVC++KFELGSEARQM CNH+YHSDCIVPWLVQHNSCPVCRQELP Q   ++  +
Sbjct: 181 SDSHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIH 240

Query: 241 TNSXXXXXXXXXXXXXXXRVNPGRRNPFSYLWPFRSSNSSSNHGGAGSSES-----RNHQ 293
            +S               R N GRRN FS  WPFRSSNSSSNH G   S S      N  
Sbjct: 241 QSSSGQSRSTSFGSNGSGRENQGRRNLFSGFWPFRSSNSSSNHNGTTESSSPAMHENNPH 300

The following BLAST results are available for this feature:
BLAST of Carg13324 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924954.11.4e-16098.29probable E3 ubiquitin-protein ligase RHC1A [Cucurbita moschata] >XP_022924955.1 ... [more]
XP_023517925.13.5e-15696.58probable E3 ubiquitin-protein ligase RHC1A [Cucurbita pepo subsp. pepo] >XP_0235... [more]
XP_022966412.15.9e-15696.23probable E3 ubiquitin-protein ligase RHC1A [Cucurbita maxima] >XP_022966413.1 pr... [more]
XP_004144313.11.0e-14790.75PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] >XP_00414431... [more]
XP_008455755.11.1e-14188.36PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >XP_008455756.1... [more]
BLAST of Carg13324 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40830.22.9e-8063.98RING-H2 finger C1A[more]
AT3G56580.21.1e-7458.10RING/U-box superfamily protein[more]
AT3G10815.11.7e-4034.66RING/U-box superfamily protein[more]
AT3G19950.13.5e-3334.69RING/U-box superfamily protein[more]
AT1G60360.12.6e-2832.11RING/U-box superfamily protein[more]
BLAST of Carg13324 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O22197|RHC1A_ARATH5.2e-7963.98Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH... [more]
sp|Q94AK4|RZF1_ARATH1.9e-7358.10E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
sp|Q8LPN7|RNG1L_ARATH6.2e-3234.69E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
sp|P0CH30|RING1_GOSHI5.8e-3059.60E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
sp|Q6AVN2|SIRP1_ORYSJ1.3e-2634.16E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI... [more]
BLAST of Carg13324 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L0T9|A0A0A0L0T9_CUCSA6.7e-14890.75Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G419610 PE=4 SV=1[more]
tr|A0A1S3C178|A0A1S3C178_CUCME7.2e-14288.36E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103495857 P... [more]
tr|A0A2N9I8M8|A0A2N9I8M8_FAGSY1.3e-11171.99Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS38476 PE=4 SV=1[more]
tr|V4SSL7|V4SSL7_9ROSI1.6e-10967.21Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012279mg PE=4 ... [more]
tr|A0A067EQC1|A0A067EQC1_CITSI4.7e-10966.89Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g021656mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg13324-RACarg13324-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 177..217
e-value: 1.0E-6
score: 38.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 176..218
e-value: 8.7E-11
score: 41.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 177..218
score: 11.973
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 140..225
e-value: 1.9E-20
score: 74.3
NoneNo IPR availablePFAMPF14369zinc_ribbon_9coord: 6..37
e-value: 2.5E-9
score: 37.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..292
NoneNo IPR availablePANTHERPTHR44290:SF1E3 UBIQUITIN LIGASE-RELATEDcoord: 1..292
NoneNo IPR availablePANTHERPTHR44290FAMILY NOT NAMEDcoord: 1..292
NoneNo IPR availableCDDcd16667RING-H2_RNF126_likecoord: 177..218
e-value: 8.09962E-23
score: 88.1436
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 156..224