Carg12093 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAACCCTAGAAGGCCACTCCTTTTCTCCCTTCCTCCTTTTCTCCTTTGTAAGCTTATCTTCTCTGCAACAAGCGGCCGGGAAGGGAGGAGAAAAAATGGTTTCGCTAAAGCTCCAGAAGCGGCTCGCCGCCAGTGTCCTCAAGTGCGGGAAAGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCGAATTCTCGTACGCTTTCTCCATCTATGTTCACTTAGATTCTATCTACGTTCAATCTCCATGTTGTTGCTTGAAGTTTTCTGTTCTTTTGATTTCACGATCTGAAGATTGTTCTGTGTCCCTTAGGTTTTCTGGATGAAATACGTTTTCGGATCTGAAAATTTTGCCCTAGGTTAAGTCTGGAATTGTGATTCCTTGTTATTTTTCTTGGTTATGGTAATTATACTATTTTGTTTCCGTCGTCGTTAGTTGAAACGCTAGTTAATCCCTTGGCTGAATCATTTGCAGTAGATTGCTAGGAGATGATATCATTGAGTTGCATAGGAAATTGCTGTTATTGAACAAAAATTTTATGATTTGTTTAAGTTTTAAAAAACTATTTCCTCTCAGATTCTTCGCATAGCGAGGAAGGCACTTTCGCCATGGAGTTTGTTTCGCTTTTACGCCTTGTTACACTTCCAAATTCCACAAGCTCTATCTTCTGTCGGGAGCAATGTTTATCTTTAATATGTTATTACTGATATGTAACTACTGATTTTTAGCAAAAATATTGTCATTTTGTGATCTTTAGTACCTGATTTACAAATAATACTGTTTGTGACTCGGTTGCTAATTAATGTCTGGATTGTTGAGTACAGGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCCAAGAGAAAGGGTCGACACTCTGGATATGGTACTTTTCTTCTGAAGCCTTGATTTATGTATATTATAGAGAAGCTTTATGGTGTTTAATATTATTTTAGTACTCCCTGTGCATATATCACTGTTTTTTCCCTTTTAGACGCAAAGTCAAGAACTTGATGAGCACTATTCTGTTTTTGTACCAAAATTCACAGTTTAAACCTTATTCAGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTTGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGGAGGGAGGAACGATTGGCACAGGTTTCTAACTCTTGACTATTACCAACATAATGTTTGTACCTTCTATGCTGTTATGCTGTCGTAATTCGTGTTTGTTCGATGTTATAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCTCAACCTGCTGCTCAATCTACTCAGTAAGCATCAATCGTGATAATCTATGTAAATCTATCTTCATTTTGCGATACTAAGTATTGGTTCGTTGTGTGCAGGCCATCAAAGAAATCGAAGAAGTGAGAATTTTACAATGGAGCATCATAGGGGAAGGTTTACTTCTGATGGCACCATTATTCTAGAGTAGTAGTGTTTTGAGGAGGGCTTTTGCAGCTTTTTTGTTCAGTTTGGACCTTGTTACTTCATCATGTCGAAGACACCAAGGATTTTAAGCCTGGTAATTTTGTTAGTTTATGTTCATTGTTTTTTGTCAACCGTGTTTGCTGAATGGAATTTTTATTTGAAGATTAAATGCATATTGATTGATCAAAGGTGAGCTTTACGTGGTTTTGAATTTGCAGTTTTTCTGTTTCTCATCTCTTCTAGTATGCCAATCTTGTTCTGAACTAACCTGTAATCTAGATGACCTTGGTTGGGGAGTAAAAAAAAACACTCTATAAGGGTTTCTCAAGGGTGGAGAAACTTTTCTCTAGCAGACGCGTTTTAAAGTCTTGAGG TAAAACCCTAGAAGGCCACTCCTTTTCTCCCTTCCTCCTTTTCTCCTTTGTAAGCTTATCTTCTCTGCAACAAGCGGCCGGGAAGGGAGGAGAAAAAATGGTTTCGCTAAAGCTCCAGAAGCGGCTCGCCGCCAGTGTCCTCAAGTGCGGGAAAGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCGAATTCTCGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCCAAGAGAAAGGGTCGACACTCTGGATATGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTTGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGGAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCTCAACCTGCTGCTCAATCTACTCAGCCATCAAAGAAATCGAAGAAGTGAGAATTTTACAATGGAGCATCATAGGGGAAGGTTTACTTCTGATGGCACCATTATTCTAGAGTAGTAGTGTTTTGAGGAGGGCTTTTGCAGCTTTTTTGTTCAGTTTGGACCTTGTTACTTCATCATGTCGAAGACACCAAGGATTTTAAGCCTGGTAATTTTGTTAGTTTATGTTCATTGTTTTTTGTCAACCGTGTTTGCTGAATGGAATTTTTATTTGAAGATTAAATGCATATTGATTGATCAAAGGTGAGCTTTACGTGGTTTTGAATTTGCAGTTTTTCTGTTTCTCATCTCTTCTAGTATGCCAATCTTGTTCTGAACTAACCTGTAATCTAGATGACCTTGGTTGGGGAGTAAAAAAAAACACTCTATAAGGGTTTCTCAAGGGTGGAGAAACTTTTCTCTAGCAGACGCGTTTTAAAGTCTTGAGG ATGGTTTCGCTAAAGCTCCAGAAGCGGCTCGCCGCCAGTGTCCTCAAGTGCGGGAAAGGCAAGGTCTGGCTCGATCCCAATGAGGTCAACGAAATCTCCATGGCGAATTCTCGCCAAAATATTAGGAAGTTGGTCAAGGATGGTTTCGTCATCAGGAAGCCAACCAAGATCCACTCCCGTTCTCGAGCACGCCGTATGAAAGAGGCCAAGAGAAAGGGTCGACACTCTGGATATGGTAAGAGAAAGGGTACCAGGGAGGCAAGGTTGCCGACCAAGATCCTCTGGATGCGGAGAATGCGTGTTCTCAGGAGATTGCTCCGCAAATATAGAGAATCCAAGAAGATCGACAAGCATATGTATCATGACATGTACATGAAAGTTAAGGGTAATGTCTTTAAGAACAAGCGTGTGTTGATGGAGAGCATCCACAAGTCGAAGGCCGAGAAGGCAAGAGAGAAGACATTGTCAGACCAATTTGAGGCTAAGAGGGCCAAGAACAAAGCCAGCAGGGAAAGGAAGTTTGCTCGGAGGGAGGAACGATTGGCACAGGGACCTGGGGAGAAACAACCACCCGCGACATCGGCAGCTCAACCTGCTGCTCAATCTACTCAGCCATCAAAGAAATCGAAGAAGTGA MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKQPPATSAAQPAAQSTQPSKKSKK
BLAST of Carg12093 vs. NCBI nr
Match: XP_023004655.1 (60S ribosomal protein L19-1-like [Cucurbita maxima]) HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88 Identity = 183/211 (86.73%), Postives = 183/211 (86.73%), Query Frame = 0
BLAST of Carg12093 vs. NCBI nr
Match: XP_023514714.1 (60S ribosomal protein L19-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of Carg12093 vs. NCBI nr
Match: XP_022959808.1 (60S ribosomal protein L19-1-like [Cucurbita moschata]) HSP 1 Score: 333.6 bits (854), Expect = 5.0e-88 Identity = 182/211 (86.26%), Postives = 182/211 (86.26%), Query Frame = 0
BLAST of Carg12093 vs. NCBI nr
Match: XP_004136019.1 (PREDICTED: 60S ribosomal protein L19-1 [Cucumis sativus]) HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86 Identity = 174/193 (90.16%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of Carg12093 vs. NCBI nr
Match: XP_008451555.1 (PREDICTED: 60S ribosomal protein L19-1-like [Cucumis melo]) HSP 1 Score: 327.4 bits (838), Expect = 3.6e-86 Identity = 173/193 (89.64%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of Carg12093 vs. TAIR10
Match: AT1G02780.1 (Ribosomal protein L19e family protein) HSP 1 Score: 300.4 bits (768), Expect = 8.5e-82 Identity = 160/191 (83.77%), Postives = 169/191 (88.48%), Query Frame = 0
BLAST of Carg12093 vs. TAIR10
Match: AT4G02230.1 (Ribosomal protein L19e family protein) HSP 1 Score: 297.0 bits (759), Expect = 9.4e-81 Identity = 159/192 (82.81%), Postives = 169/192 (88.02%), Query Frame = 0
BLAST of Carg12093 vs. TAIR10
Match: AT3G16780.1 (Ribosomal protein L19e family protein) HSP 1 Score: 294.3 bits (752), Expect = 6.1e-80 Identity = 162/211 (76.78%), Postives = 170/211 (80.57%), Query Frame = 0
BLAST of Carg12093 vs. TAIR10
Match: AT4G16030.1 (Ribosomal protein L19e family protein) HSP 1 Score: 58.5 bits (140), Expect = 5.6e-09 Identity = 49/103 (47.57%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Carg12093 vs. Swiss-Prot
Match: sp|Q9SRX2|RL191_ARATH (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.5e-80 Identity = 160/191 (83.77%), Postives = 169/191 (88.48%), Query Frame = 0
BLAST of Carg12093 vs. Swiss-Prot
Match: sp|P49693|RL193_ARATH (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3) HSP 1 Score: 297.0 bits (759), Expect = 1.7e-79 Identity = 159/192 (82.81%), Postives = 169/192 (88.02%), Query Frame = 0
BLAST of Carg12093 vs. Swiss-Prot
Match: sp|Q9LUQ6|RL192_ARATH (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78 Identity = 162/211 (76.78%), Postives = 170/211 (80.57%), Query Frame = 0
BLAST of Carg12093 vs. Swiss-Prot
Match: sp|P36241|RL19_DROME (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2) HSP 1 Score: 240.7 bits (613), Expect = 1.4e-62 Identity = 122/165 (73.94%), Postives = 142/165 (86.06%), Query Frame = 0
BLAST of Carg12093 vs. Swiss-Prot
Match: sp|Q3T0W9|RL19_BOVIN (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 1.8e-60 Identity = 118/165 (71.52%), Postives = 141/165 (85.45%), Query Frame = 0
BLAST of Carg12093 vs. TrEMBL
Match: tr|A0A1S3BSJ2|A0A1S3BSJ2_CUCME (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103492800 PE=3 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 2.4e-86 Identity = 173/193 (89.64%), Postives = 177/193 (91.71%), Query Frame = 0
BLAST of Carg12093 vs. TrEMBL
Match: tr|A0A2K3NPG7|A0A2K3NPG7_TRIPR (Ribosomal protein L19 OS=Trifolium pratense OX=57577 GN=L195_g001356 PE=3 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 5.3e-86 Identity = 191/211 (90.52%), Postives = 195/211 (92.42%), Query Frame = 0
BLAST of Carg12093 vs. TrEMBL
Match: tr|A0A2C9WBP1|A0A2C9WBP1_MANES (Ribosomal protein L19 OS=Manihot esculenta OX=3983 GN=MANES_03G199500 PE=3 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 2.0e-85 Identity = 174/192 (90.62%), Postives = 175/192 (91.15%), Query Frame = 0
BLAST of Carg12093 vs. TrEMBL
Match: tr|C6SY65|C6SY65_SOYBN (Ribosomal protein L19 OS=Glycine max OX=3847 GN=100499920 PE=2 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 7.6e-85 Identity = 188/212 (88.68%), Postives = 191/212 (90.09%), Query Frame = 0
BLAST of Carg12093 vs. TrEMBL
Match: tr|W9SA46|W9SA46_9ROSA (Ribosomal protein L19 OS=Morus notabilis OX=981085 GN=L484_007486 PE=3 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 7.6e-85 Identity = 172/193 (89.12%), Postives = 176/193 (91.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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